Penaeus chinensis (fleshy prawn): 125039374
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Entry
125039374 CDS
T08118
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03410
Base excision repair
pchn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125039374
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125039374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125039374
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125039374
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchn04147
]
125039374
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
125039374
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125039374
MMR (mismatch excision repair)
Other MMR factors
125039374
Exosome [BR:
pchn04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125039374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
YABBY
COX4
DUF3974
Motif
Other DBs
NCBI-GeneID:
125039374
NCBI-ProteinID:
XP_047489168
LinkDB
All DBs
Position
27:15147207..15148249
Genome browser
AA seq
224 aa
AA seq
DB search
MPRGRPRGVAAEKPRGRMTAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKTMSDK
EKKKFHELAEDDKKRYDEEMKDFVPSPGAGRRGRRARGRRPKDPNKPKRALSAFFYYAND
ERPKVRAANPDFSVGEVAKELGRQWNELGEDEKVKYEKQAEEDRARYDREMTAYKLGGAS
PQKKMKASNGHPVDADPEDDDDDGEVGGEDDDDDDVSDEGSDDE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtggaagacccagaggagttgcagccgagaagccccgtggccgcatgacggcc
tatgcgtttttcgtgcagacttgccgtacagaacacaagaaacttcatcccgacgagaat
gtgcagttcgccgaattctcgcgccagtgttccgagcgctggaagacgatgtccgacaag
gaaaagaagaaattccacgagttggcagaggacgacaagaagaggtacgacgaggagatg
aaggacttcgtaccctcaccgggcgcggggcggcgagggcggcgcgcacggggaaggaga
cccaaggaccccaataagcccaaacgcgccctgtccgccttcttctactatgccaacgac
gagaggcccaaggtgcgggcggccaaccccgacttctccgtgggcgaggtcgcgaaggag
ctcggccgtcagtggaacgagctgggcgaggacgagaaagtcaagtacgagaagcaggcg
gaggaggaccgcgcccgctacgaccgcgagatgacggcctataagttaggcggtgcgtcc
ccacagaagaagatgaaggcgagcaacggacaccctgtggacgcagatcctgaggacgac
gacgacgacggcgaagtgggcggcgaggacgacgacgacgacgacgtgtctgacgaaggg
tcggatgacgagtga
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