Penaeus chinensis (fleshy prawn): 125039411
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Entry
125039411 CDS
T08118
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125039411
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125039411
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
PROPPIN
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125039411
NCBI-ProteinID:
XP_047489245
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All DBs
Position
27:5230355..5265083
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AA seq
707 aa
AA seq
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MAEASDSSHELEVETSTPKDSDSSLLNNSNKRDQNVKKDDSGISSERLENSDDDEGNKKL
KSEGEKKSGESSGISIVKGKTCRLRNYRPRLLESSSNDSGDDDDDDSTLRASNNEEKKSD
TALTRRNVTITLASEMEDTSADTSRDTETDHMEPTSPSAMETGSAASGNTEDDNTDDSPP
MERRIERRFSSQRIFGGLLSDTDSDSDDGGRRRGLQDGIENETQWKDTEEAIAKEMTRIK
ERPKPKHHWNFVDQVVQRQLGSRSRYQSSVLFSHHYYDSLHVPKRLELMYKMEFHRGCVN
ALSFNASGTRLASGSDDFQIAVWDWAREKAIITFYSGHRNNVFQSKFLPLSGDTHIVSCA
RDGQVRLAELSSTGVCKATRKLAKHHGPAHKLATLPTSPHVVLSAGEDAVVLNIDIRQEQ
PSRVAFVKDISGSRVSLYSIHAHPINENQFCVSGHDQYVRVYDRRCGNDFPTLKYCPRHL
YEAVPTPTVTCAVYSGNGDSILASYNDDDIYLFDTSRSEAADAVHRYSGHRNSATVKGVN
FFGPGSQYVVSGSDCGNIFFWHRETEAIVQCMPGDENGVVNVLEPHPHIPVLATSGLDDD
VKIWVPTCEEDPDLPNLDQTLKSNLSKRHKERNEEFTGLDSQMLMVLWHHIRRTDSRRRR
MATAGNSSSGNVGAEGGNGTGGSSSEDSNDSEDDDSEGHRGIQCATH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcatctgattcctcccatgagcttgaggtggagacgagtaccccaaaagac
agtgactcctctttgctcaacaacagcaacaagagagatcaaaatgtcaaaaaagatgac
tctggaatatccagtgaaagattagaaaattcagatgatgatgaagggaacaagaaatta
aagtcagaaggggagaaaaaaagtggagagtcttcaggcatctcgattgtcaaggggaag
acctgtcgcctgagaaactacagaccaagattactcgagtcaagttcaaatgatagtggt
gatgacgatgacgatgacagtaccctgcgtgcaagcaacaatgaagagaaaaagtctgac
acagctttgacacggagaaacgtgaccataaccttggcatcagaaatggaggacacaagc
gcagatacaagtcgtgacactgagacagatcacatggagcctactagtccatcagcaatg
gagactggaagtgctgcaagtggaaacactgaggatgataacacagatgactctccacca
atggaacgtcgcattgagcgacgtttcagcagccaaagaatatttggtggacttttgtca
gacacagattctgactctgatgatggtgggcgacgtaggggtctccaggatggcatagag
aatgaaacacagtggaaggacacagaagaagccattgccaaagaaatgacaagaattaag
gaacggcccaaaccaaaacaccattggaattttgtagatcaagttgttcagaggcagtta
ggcagtcgatcaaggtaccaatcctcagtgttatttagtcaccactactatgactcactc
catgtacctaagcgccttgaactcatgtacaagatggagttccacaggggatgcgttaat
gccctaagcttcaatgcgagtggcaccaggcttgccagtggctctgatgatttccagatt
gccgtttgggattgggctcgagagaaagccataatcacattctacagtggacataggaat
aatgtgttccagagcaagttcctaccactgagtggtgacacacacattgtatcctgtgca
agggatggacaagttcgattggctgaactatcctccactggcgtgtgcaaggccacaaga
aaattggccaagcatcatggcccagcacataagcttgccaccctccctacctccccacat
gttgttttatctgctggagaagatgctgttgtacttaatattgatattcgtcaggagcag
cctagcagggtggcatttgtgaaggacatttctggtagccgtgtctctctctatagcatc
catgctcatccaatcaatgaaaatcagttttgtgttagtgggcacgatcagtatgttcga
gtatatgaccgacgttgtgggaatgacttcccaactttgaagtactgtccaagacatttg
tatgaggctgtcccgacaccaacagtaacttgtgcagtttacagtggtaatggggactct
atactggcatcatacaatgatgatgacatttatctgtttgatacatcccgctctgaagct
gcagatgcagtccatagatactccggccatcgtaatagtgctacagttaagggtgtaaat
ttctttggtcctggaagccagtacgttgtatcagggtctgactgtggaaacatattcttc
tggcatcgcgagactgaggccattgtccagtgcatgccaggagacgagaatggagtggtt
aatgtgttggagccacatcctcacataccagtgctggctacaagtggccttgacgacgat
gttaaaatttgggtgccaacgtgtgaggaagatccagacctgcccaacctggatcagacc
ctcaagtccaatttaagtaagcgccacaaagaacgtaatgaagagttcactggacttgat
tcccaaatgctgatggtcctttggcatcacatcagacggacagatagcagacgacgtagg
atggcaacagctgggaacagcagcagtggcaatgtaggagccgagggtggcaatggcact
ggagggtcgtctagtgaagactccaacgacagtgaagatgacgattctgaaggacaccgg
ggtatccagtgtgctacacactag
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