KEGG   Penaeus chinensis (fleshy prawn): 125039420
Entry
125039420         CDS       T08118                                 
Name
(RefSeq) nucleoporin p54-like isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125039420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchn03019]
    125039420
Messenger RNA biogenesis [BR:pchn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125039420
SSDB
Motif
Pfam: Nup54 BAR Nup54_C N6_N4_Mtase
Other DBs
NCBI-GeneID: 125039420
NCBI-ProteinID: XP_047489281
LinkDB
Position
3:complement(18150277..18180743)
AA seq 609 aa
MSNFGFGTTNTGGSTAPSGGGFSFGGTSTAGTSTAASTGFSFGGTSTAPKSTAGSTGFTF
GNAATAGAATGTAGGFSFGAPATSAPGGFCFGSATNPTTSASPFGATFGAATPATTATTQ
GFGFLTNFGGSGGGGGGAGGGGGFPKPATSFGPGGFASLTNTVPGTGFSFGGGTNPPAKA
FNFGGPATSNASGGFGLLGSGFGAKPATGFPAQTSDATQLQQGALGQPDPSLALHLAICT
PSYFNNESDEVLRKWNQLQAFWGAGKGYYAPNMPPVEFTPENPYCRFKAVCYARIPDYRN
EDGHVQVNIGKPLSEVEQHKQQIVTTLTTLFNGAEVVVEAAFAAKGPNQTVLHMHVLQPL
PNGGKQKAPSSDVYRHMAAPTSAETVKNLCIQDVIPLVSLTEKQMKEYLDTPQRGIDPAL
WEQAKRANPDPKKFFPVVKVGFQELQMQFKEQEQHAEKLQTSMKEVTDAITQLKHKQAMV
RAAIQNAKWKQANLMRRVLKLVSAQEVERKRGVPLDQTEEQIRMRLEDLYVQLMQPTQYR
GCLNELMAQMSVKPSGLKGCPRYGLVNDKEKDISQYISWQQEALNAVVTVLKEDLQIVDS
MGEELQRKS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtcaaattttggatttggtacaacgaataccggtgggtcgacagcgccaagtggaggt
ggctttagttttggaggcacaagcacagcaggcacaagcactgcggcgtctacaggtttt
agtttcggagggacaagcactgcgccgaagtcgactgcaggttctacaggtttcactttt
ggaaacgcggccacggcaggggcagcaacaggaacagcaggtggtttcagcttcggtgca
ccagccacaagtgcccccggaggattttgctttggctccgctaccaaccccaccacaagt
gcatctccctttggtgcgacctttggagccgccacaccagctaccacagcaaccacacaa
gggtttggctttctgactaactttggtggtagtggaggtggtggaggaggtgcaggaggt
ggcggtgggtttcccaagccggcaacctcctttgggccaggaggctttgcaagccttact
aatacggtgcctggaacgggcttcagcttcggcggcggcaccaacccccctgccaaggcg
tttaacttcggaggccctgcgacttccaatgcctcgggcggctttgggctcctgggctct
gggtttggagctaagcctgctactggtttcccagcacagacctcagatgccacacagctt
cagcagggtgctctagggcagcccgacccctcactggccctccacctggccatctgcacc
ccttcatacttcaacaacgagagcgatgaggtgctgcgcaagtggaaccagctgcaagcc
ttctggggcgctggaaaaggctattacgccccaaacatgcccccggtggagttcacgcct
gaaaacccttactgccgcttcaaggccgtctgttacgcgcgcatcccagactaccggaat
gaggatggccacgttcaggtcaacattgggaagccgctgtcggaagtggagcagcacaaa
cagcagattgtgacgaccctgacgacactcttcaacggggcggaggtggtggtggaagcg
gcgtttgctgcaaaaggccccaatcagaccgtccttcacatgcacgtcttgcagccactt
ccaaatggtgggaaacagaaagcgccctcgtcggatgtgtatcgtcacatggcagccccg
accagtgcagaaactgttaagaacttgtgcattcaggatgtgatcccactagtgtcgttg
accgagaagcagatgaaggaatatctcgacaccccacagagaggcatcgaccccgccctg
tgggagcaggccaagagggcaaaccctgaccccaagaagttcttccccgttgtcaaggtc
gggttccaggagctccagatgcagttcaaagagcaggagcagcatgcagaaaaactgcag
accagcatgaaggaggtcacagacgccatcacgcagctcaagcacaagcaggctatggtg
agggcagccatccagaatgccaagtggaagcaggccaacctcatgcgcagggtgctcaag
ctggtgtcggctcaggaagtagagcgcaagagaggagtgccacttgatcagacggaggag
cagatccgcatgcggctggaagacctgtatgtccagcttatgcagcccacgcagtacagg
ggatgcctcaacgagctcatggcccagatgtcggtgaagccatctggcttgaagggttgc
cctcgctacggcctggtgaacgacaaggaaaaggacatctcgcagtatatctcttggcag
caagaagcactcaatgcagttgtcacagtcctaaaggaggacctacagattgtagacagt
atgggggaagaactacaaagaaagtcttag

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