Penaeus chinensis (fleshy prawn): 125039420
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Entry
125039420 CDS
T08118
Name
(RefSeq) nucleoporin p54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125039420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125039420
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125039420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
BAR
Nup54_C
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
125039420
NCBI-ProteinID:
XP_047489281
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Position
3:complement(18150277..18180743)
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AA seq
609 aa
AA seq
DB search
MSNFGFGTTNTGGSTAPSGGGFSFGGTSTAGTSTAASTGFSFGGTSTAPKSTAGSTGFTF
GNAATAGAATGTAGGFSFGAPATSAPGGFCFGSATNPTTSASPFGATFGAATPATTATTQ
GFGFLTNFGGSGGGGGGAGGGGGFPKPATSFGPGGFASLTNTVPGTGFSFGGGTNPPAKA
FNFGGPATSNASGGFGLLGSGFGAKPATGFPAQTSDATQLQQGALGQPDPSLALHLAICT
PSYFNNESDEVLRKWNQLQAFWGAGKGYYAPNMPPVEFTPENPYCRFKAVCYARIPDYRN
EDGHVQVNIGKPLSEVEQHKQQIVTTLTTLFNGAEVVVEAAFAAKGPNQTVLHMHVLQPL
PNGGKQKAPSSDVYRHMAAPTSAETVKNLCIQDVIPLVSLTEKQMKEYLDTPQRGIDPAL
WEQAKRANPDPKKFFPVVKVGFQELQMQFKEQEQHAEKLQTSMKEVTDAITQLKHKQAMV
RAAIQNAKWKQANLMRRVLKLVSAQEVERKRGVPLDQTEEQIRMRLEDLYVQLMQPTQYR
GCLNELMAQMSVKPSGLKGCPRYGLVNDKEKDISQYISWQQEALNAVVTVLKEDLQIVDS
MGEELQRKS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttggatttggtacaacgaataccggtgggtcgacagcgccaagtggaggt
ggctttagttttggaggcacaagcacagcaggcacaagcactgcggcgtctacaggtttt
agtttcggagggacaagcactgcgccgaagtcgactgcaggttctacaggtttcactttt
ggaaacgcggccacggcaggggcagcaacaggaacagcaggtggtttcagcttcggtgca
ccagccacaagtgcccccggaggattttgctttggctccgctaccaaccccaccacaagt
gcatctccctttggtgcgacctttggagccgccacaccagctaccacagcaaccacacaa
gggtttggctttctgactaactttggtggtagtggaggtggtggaggaggtgcaggaggt
ggcggtgggtttcccaagccggcaacctcctttgggccaggaggctttgcaagccttact
aatacggtgcctggaacgggcttcagcttcggcggcggcaccaacccccctgccaaggcg
tttaacttcggaggccctgcgacttccaatgcctcgggcggctttgggctcctgggctct
gggtttggagctaagcctgctactggtttcccagcacagacctcagatgccacacagctt
cagcagggtgctctagggcagcccgacccctcactggccctccacctggccatctgcacc
ccttcatacttcaacaacgagagcgatgaggtgctgcgcaagtggaaccagctgcaagcc
ttctggggcgctggaaaaggctattacgccccaaacatgcccccggtggagttcacgcct
gaaaacccttactgccgcttcaaggccgtctgttacgcgcgcatcccagactaccggaat
gaggatggccacgttcaggtcaacattgggaagccgctgtcggaagtggagcagcacaaa
cagcagattgtgacgaccctgacgacactcttcaacggggcggaggtggtggtggaagcg
gcgtttgctgcaaaaggccccaatcagaccgtccttcacatgcacgtcttgcagccactt
ccaaatggtgggaaacagaaagcgccctcgtcggatgtgtatcgtcacatggcagccccg
accagtgcagaaactgttaagaacttgtgcattcaggatgtgatcccactagtgtcgttg
accgagaagcagatgaaggaatatctcgacaccccacagagaggcatcgaccccgccctg
tgggagcaggccaagagggcaaaccctgaccccaagaagttcttccccgttgtcaaggtc
gggttccaggagctccagatgcagttcaaagagcaggagcagcatgcagaaaaactgcag
accagcatgaaggaggtcacagacgccatcacgcagctcaagcacaagcaggctatggtg
agggcagccatccagaatgccaagtggaagcaggccaacctcatgcgcagggtgctcaag
ctggtgtcggctcaggaagtagagcgcaagagaggagtgccacttgatcagacggaggag
cagatccgcatgcggctggaagacctgtatgtccagcttatgcagcccacgcagtacagg
ggatgcctcaacgagctcatggcccagatgtcggtgaagccatctggcttgaagggttgc
cctcgctacggcctggtgaacgacaaggaaaaggacatctcgcagtatatctcttggcag
caagaagcactcaatgcagttgtcacagtcctaaaggaggacctacagattgtagacagt
atgggggaagaactacaaagaaagtcttag
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