Penaeus chinensis (fleshy prawn): 125039482
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Entry
125039482 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03030
DNA replication
pchn03410
Base excision repair
pchn03420
Nucleotide excision repair
pchn03430
Mismatch repair
pchn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125039482
03410 Base excision repair
125039482
03420 Nucleotide excision repair
125039482
03430 Mismatch repair
125039482
03440 Homologous recombination
125039482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125039482
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125039482
Enzymes [BR:
pchn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125039482
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125039482
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125039482
MMR (mismatch excision repair)
DNA polymerase delta complex
125039482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
125039482
NCBI-ProteinID:
XP_047489439
LinkDB
All DBs
Position
3:complement(5851961..5864634)
Genome browser
AA seq
1104 aa
AA seq
DB search
MHRLVKMDQKRPHPNGGKAGPPKKIRGDEDDDMDFDDEFPDDYDMEQFDEQDFTDAPGVK
VVDDEKADSSWGRPPLPSINPATENLVFQQIDIDHYIGPPCEGMPGQQAGRVPIMRMFGV
NDNGNSICCHVHGFSPYLYVTCPPIFKESHLGAFKDALNRVMIADMKSNKENITDAVLTV
DLTKKESIYGFHGNKKVNFLKITLALPRLIAAAKRLLGEGKVFVSDIGTPAYEAYESNID
FEIRFMVDTHVVGCSWIELPAGSWSIRKDRLDTRCQLEVDVAWNKFISHAPEGEWARVAP
FRILSFDIECAGRKVYEKNGKYHCVFPEPDKDPVIQIGNMVIRQGEAEPFIKTIFTLKLC
APIVGSKVKSYNVEKEMLDEWAKFVRTVDPDIMTGYNINNFDMPYLLNRANHLKSEKFSF
LGRIKSIRSVIKESVLQSKQMGRRENKSINTEGRCQFDLLIVLVRDYKLRSYTLNAVSYH
FLQEQKEDVHHSIISELQDGNPQTRRRLAIYCLKDALLPLRLLDKLMCIINYMEMARVTG
VPLSYLLTRGQQIKVVSQLLRKAAEQDLVLPVHKSAGDDEYEGATVIEPRRGYYNVPIAT
LDFSSLYPSIMMAHNLCYTTLLSSPAKATELGLESDEFIKTPSGNYFVKSTKRKGLLPEI
LESLLAARKKAKNDLKKETDPLRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQS
VTSFGRMMIAFTKEQVEEKYTLENNYPSNAEVIYGDTDSVMVKFGVETVAEAMELGKEAA
AYVTGKFLQPIKLEFEKVYFPYLLINKKRYAGLYFTRPETHDKMDCKGIETVRRDNAPIV
ANLINTCLQKILIDRNPMGAVDYAKQTISDLLCNRVDISNLVITKELTKTEKEYAAKQAH
VELANKMKKRDPGTAPKLGDRVPFVIIAGAKGTPAYEKAEDPIYVLENSLPIDYEYYLTN
QLSKPLLRIFEPILGEKAESQLLKGDHTRSRIITHSKVGAMAKFITKKASCVGCKVPITS
ASEALCKHCKMREGAIYMQHITSLGALEEKFARLWTQCQRCQGSIHEEVICTSRDCPIFY
MRKKVQLELADQDKLIQRFGAPAW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggttggtgaagatggatcagaagcgaccccatccaaatgggggtaaagcggga
ccacccaaaaagataagaggagatgaagatgacgatatggacttcgatgatgaattccct
gatgactatgacatggaacagtttgatgaacaagatttcacagatgcaccgggagtgaaa
gttgttgacgatgagaaagcagacagctcttggggtcgccctccacttccctcaattaac
cctgcgacggagaatctggttttccaacagattgatattgatcattatattggaccacct
tgtgagggaatgccagggcagcaggcaggtagagtgcccatcatgaggatgtttggtgtc
aatgacaatgggaactccatctgctgtcatgtgcatggcttctctccctacttgtatgtc
acctgcccacccatcttcaaggagtcgcacctgggagcatttaaagatgccctcaaccga
gtgatgatcgccgacatgaaatcaaacaaggaaaacatcactgatgctgtccttacagtc
gacctgaccaaaaaggagagcatctatggtttccatggcaacaagaaagtaaacttcctg
aagatcactttagccttgcccagacttatagctgcagcaaagagactccttggcgagggg
aaggttttcgtgtcggacatcggaactccagcttatgaagcctatgagtccaatatcgat
tttgaaatcaggttcatggttgacacacatgtagtaggttgcagttggatagagctgcca
gcaggctcttggtcaataaggaaggacaggctggacactcgctgccaactagaggtggat
gtggcctggaacaaatttatatctcacgctcctgagggtgaatgggccagggtggcacct
tttagaatcctctcatttgacatagaatgtgcaggacgtaaagtctatgagaaaaatggg
aagtaccattgtgtgttcccagagccggacaaggaccccgtgattcagatcggcaacatg
gtgataagacagggagaagctgagccgtttataaagactatatttactctgaagctatgt
gctcctattgtgggctcgaaagtcaagtcttacaacgtagagaaggaaatgctagatgaa
tgggcaaaatttgtaaggactgttgatccagacatcatgacaggctacaacatcaacaat
tttgacatgccttatctgctcaatcgggcaaatcacctgaaatctgagaagttctccttc
ctcggcagaatcaaaagcatcaggtctgtgatcaaagagtcagtgctacagagtaaacag
atgggaagaagggaaaacaagtccatcaacacagaaggaagatgtcagtttgatcttctc
atcgttttggtacgagattacaagctcaggtcctacaccctgaatgctgtgtcctaccat
tttctacaagaacagaaggaagatgtccaccattccatcatctctgagcttcaggatggc
aatccacagacacgcagaagattagccatatactgcctgaaagatgccctccttcccttg
cgtctgctggataaactcatgtgcatcatcaactacatggagatggcacgtgtgacagga
gtccccctctcgtacctcctcacccgtggccagcagattaaagtcgtgtcacagctgctg
agaaaggcagcggaacaagacctcgtcctcccagtccacaagagtgcaggagatgatgag
tatgaaggagcgaccgtcattgaaccccgcagaggctactataacgttcccattgcgacc
cttgatttctcctctctgtatccgtccatcatgatggctcacaacctgtgctacacgact
ctcttgtctagtcccgctaaggctactgagttaggactcgaaagtgatgagttcatcaaa
actccatcaggaaattactttgtaaaatctaccaagaggaaagggttgctgcctgaaatt
ctggagtcccttttggcagcaaggaagaaggccaaaaatgacctgaagaaggagactgat
cccttgagaaagaaggtgctggatggtcgtcaattggccctgaagatatccgccaactct
gtgtatggtttcacaggggctcaagtcggcaaactgccatgcttggaaatttctcagagt
gtaacatcctttggacgaatgatgattgcgttcacaaaggaacaggtcgaggagaaatac
actttggagaataattatccaagtaacgcagaggtcatttacggtgacactgactctgtg
atggtgaagtttggtgtggagaccgtggctgaggctatggagctcgggaaggaggctgct
gcttatgtcacaggaaagttccttcagccaatcaaacttgagtttgagaaagtttatttc
ccatatttgctgatcaacaaaaagagatatgctggcttgtactttactcggccagagacc
catgacaagatggactgcaagggtattgagacagtgcgacgtgataacgcccccattgtt
gcaaacttgatcaacacttgccttcagaagatcttaattgacaggaatccaatgggagca
gtagactacgccaagcaaacgatttctgaccttctgtgtaaccgtgtggacatctccaac
ctcgtcattacaaaggaactgacaaagacggagaaggaatatgcagccaaacaggctcac
gtagaacttgccaacaagatgaagaagagagatccaggcacggctccaaagctgggggat
cgagttccttttgtgatcattgcgggagcgaaaggaacacctgcttatgaaaaggcggag
gaccccatttatgtgttggagaacagcttacccattgactacgaatattacctgaccaac
cagctgagcaaaccccttttgcgaatttttgagcccatcctgggagagaaggcagaatca
cagctgctaaagggagaccacaccagatcgagaatcataacacacagcaaagttggagcc
atggcaaaattcatcaccaaaaaggcctcatgtgttggctgcaaagtcccaattacttca
gcatctgaagcattatgtaaacattgcaagatgcgggagggtgcgatttacatgcagcac
ataacatctttaggagccttggaagaaaagtttgcacggttgtggacacagtgtcagcgc
tgtcagggatccatccatgaagaagttatctgcacaagccgagactgtcctattttttac
atgcgcaagaaagtacagttggagttggctgatcaagacaaactgatacagagatttggg
gctcctgcgtggtga
DBGET
integrated database retrieval system
