Penaeus chinensis (fleshy prawn): 125039494
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Entry
125039494 CDS
T08118
Name
(RefSeq) trithorax group protein osa-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125039494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125039494
03021 Transcription machinery [BR:
pchn03021
]
125039494
03036 Chromosome and associated proteins [BR:
pchn03036
]
125039494
Transcription factors [BR:
pchn03000
]
Eukaryotic type
Helix-turn-helix
ARID
125039494
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125039494
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125039494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
125039494
NCBI-ProteinID:
XP_047489453
LinkDB
All DBs
Position
27:complement(15948361..16057735)
Genome browser
AA seq
2071 aa
AA seq
DB search
MVGSSSLGSFVLQTQAVLSLAREGNVNGRAVAVNATVRRYTTCRSATAPRCVEAVGTGHE
GSGRLPTPPPQPQQQQQPRSPHQQHQQQQLQPAGMRVSPAPPLSAGANPPHPPHSPHMSP
AVDVRGRLLHHPQQLAFLHHHHSSSAPTSNSTSGPSAPPQPPQLLDVASHIPTSSGGPGS
VVMPPHPGSGQSDSRNSNMHAPGYPPGGPPHMATGPPSGPHGYPTKLGHMPPSGPPGPPY
GQPGYQAGHQYPPVRPQGPIMQPYPQNFPPGAPQGPQGPQGPPSSMPPGHQYPPRPPPNN
HVPPSQPYGYPPFGTQGWGGQTMNQGPPGPGGMPSSMMPGGPGMPGKGGPVQMPGQSNQP
GASSSGGGPRPHTPPHTHYLKQHIQHKISGYGATQMYPNGPGMPGMPNSPQNNMPPPTST
PQPITPTSTPLESGDHSGSNTSVNNTNPPSIGPDGNPVVDEASQQSTVSNTSAVSRAVFT
IHKASGEDRSGTPKPHKDGPMGGPGGIPGGMTGGQHPPSHPPTPINSAPSPGAASMTSQQ
DEFENLNSPGWPRSPSTQTVYANSQPPPPPDIYRPSKPGENIARLYEMSDSPERRAWLDK
LLSFMDENKTPITACPTISKNPLDLYALYLHVRERGGFVEVTKNKQWKDVAAVMGIGASS
SGSYTLRKHYMKHILAYECKFDRGGIDPLPIINQIESAAKKKTTKTISVPSPGSSNSQDS
FPPAGSNSSSMDGFSNGPHVPGGPGVPGPYPQYPPASEYGSHMQQRPPSQSTPGYQGYQG
GQYHSYQGMQGNYSQGGYHNSGYPPDGRGYQPPGPPNHQGNYQGGYQQPGSYQRPGYAPG
QPGYQQDQFPMGSSGTNYGNSQLAKQLLNPPRSTGPVFQGYQGGNMYPPPQKPGAAPSPG
PTGPNPPAGYSTSPRRHPDFEKTSVGWRGNSQYGGYTGQNQQGPPQQAWSRPNDSAPPGA
PTSQWSQPRFPGPQGQFQNAVSAGRGWSGGSYTQNVGPRPQGPPTNKNYLVPPPSSFKCG
GSMYGVYTGKHQFPLDSVEAVLPVLARRKRMTRSDLPTLDPWRLLMSLRCGLAAEVTWAL
DVLNILLFDDQTVVYFGLHHMPGLLEALIEHLRRGLINMFDICSELELGSDEKATGANKR
VKAMQHDDSDRPWYLRPPPSPTLELDLGKLEDHDLQNKEEILKGAEDFTLVTKTGKTVKF
VKRDGELFMREGSREWDKWEGFSSGVDTWSVGGGECTAHIICSMQSSVPPLPFTRLMPCK
DGRIEEMSLKKEKLIEVKEEVEIKKEVVVEVKKEEKSKKDKVVDVLAELKEKKVEKMEDL
ISREKCDNSKDTESTDKLFSQRINRVNNARKSKLDEIFKKLKKEPMEDHSDNKKRETKEV
CVLKKDNEVHVDCSVVVKQEPSSDKLTERKQEEVSQNKPESKEKLERRESSGSKRESGGF
KRPHEDLEEESWSPDEASLSTTTEGQDWLGRRVMCVGTVIRNLSFIPGNEEVMSKCASLL
ALLGKTILLHHEHPKRTPSTAHYDRDEEADLSDWCSSLAPDTHWWWPYLHHVHENTLVTL
ANMAGTLDLSIYPEEISRPLLNGLLHWATCSASYGQDPFPGGGTSLQSALSPQRLALEAL
VKLCVLDQNTDLVLATPPFTRLDSLCGQLTRFMCRGEDQVLREFSINLLHYFSAADSGVA
RVIAMQNGCVSLLVAFIEEAEAAAMNVANVQGVSALKENPELMGTSLDMVRRAANTLVHL
SRVPANARVLANCENRLLTLVMSQILDTYVASQLSQVLFNVAQVQNEFPQLSPCPSPPSS
PPPTTAQASELTKTPDAPMDVDSSPLDAPSQPTSITTAVKLVNHDSILTEYDKTNAASPN
PASAPSPNPISAPNATPVPTPAPAPVPAVTPSPVPASASTPSTPASGPAVTPATASAPAP
ALAPTTAPAPASAPAPAPATPAPASAPAPAPAPAVTPAIAPTPTPTPAASLAPAPTHTPA
SAPFSPLPSAPAATPAPVPTAVPSLGKVPTPNLTPAPISANSPVFNPQKMPMKPSNPPTQ
TTNSESSTKCESLAAAAAPVPMEASAASPSS
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttcgagttcgcttggttcgttcgtgcttcaaacacaagccgtgttgagtttg
gcgagggaggggaatgtgaacgggcgggcggtcgctgtgaatgctacagtgcggcggtat
accacgtgtcgtagtgcaactgcccctcgctgtgttgaggcggtggggacgggccatgag
ggaagtggacgcttgccaacccctcctcctcagccgcagcagcagcagcagcctcgctcg
ccgcaccagcagcatcaacaacaacagctgcagccggcggggatgagggtgtcgcctgca
ccgccgctgtctgcaggagccaacccgcctcacccccctcattctccgcacatgtctcct
gccgtagatgtacgtggtcgcctcctgcaccatccccaacagctcgctttcctccaccac
caccactccagctccgcccccacctccaactccacctccggaccgtctgcaccaccacaa
ccaccacaactactcgatgttgcttctcatatcccaacttcctcaggtggaccggggagc
gttgtgatgcccccccaccctggcagtggacagagtgatagtcgcaacagcaacatgcat
gcacctgggtatccccctggtgggcccccacacatggcaacaggccctccctctgggccg
catggctatcccacaaagctaggccacatgccacccagtgggccccctggacccccatat
gggcagccaggctaccaagcaggccaccaataccccccagtaagaccccaggggcccata
atgcagccatacccacaaaactttccccctggcgctccacagggtcctcagggccctcag
ggtcccccttcttccatgccgccaggccatcagtatcccccacggcccccgcccaacaac
catgttccccccagccagccatacgggtatcctcctttcgggacgcagggttggggagga
cagaccatgaaccagggcccaccgggaccaggtggtatgcccagctccatgatgcctggg
ggacctggcatgccaggaaaaggtggacccgttcagatgccaggtcagtcaaatcaacct
ggagccagtagtagtggtggaggtcctcgaccccacactcccccacacacccactacctg
aagcagcacattcagcacaagatcagtgggtatggcgcaacccagatgtaccccaatggc
cccgggatgcccgggatgcctaacagcccccagaacaacatgccacctcccacgtccacc
ccacagccaatcacccccaccagcaccccactggagtctggggaccactcggggagtaac
acttctgtgaacaacaccaacccaccttctataggcccagatgggaacccagttgtggat
gaggcttcacaacaatccactgtttctaatacctctgctgttagcagggcagtgtttaca
attcataaagcttctggagaggaccgttcaggcacaccaaaaccccacaaggacggccca
atgggaggaccaggaggcatcccgggtgggatgactggtggccagcacccgccctcccat
ccaccaacacccatcaactctgccccctcacctggtgctgcctccatgacctcacagcag
gacgaatttgaaaatctgaattctcctggctggccaaggagccccagcactcagacggtg
tatgctaacagtcaaccacccccacccccagacatctacagaccatccaagccaggagaa
aacatcgcaagactgtatgagatgtcggactcgcctgagcgtcgtgcctggctcgacaag
ctgctctctttcatggatgaaaacaagacgccaatcactgcgtgtccgaccatcagcaag
aatccacttgatctctatgccctgtatctgcatgtgcgggaacgaggcggctttgtggag
gttaccaagaacaagcagtggaaggatgtggctgctgtcatgggcatcggggcttcatcc
agcggctcgtacactctccgcaagcactacatgaagcacatcctggcctatgagtgcaag
tttgaccggggaggcattgaccccctccccatcatcaatcagatcgaatcggcagccaag
aagaagacaacgaagacgatatcggtgccctctcctggttcttcaaactctcaagattcc
ttcccgccagctggctccaacagcagttccatggacgggttttccaatggtccacacgta
cctggtggtccaggagtgcctgggccttatccccagtatcctccagcatctgagtatggc
tctcatatgcagcagcgtcctccttcgcagtcaactcctggttatcagggttaccaaggg
ggacaataccacagctaccaggggatgcaagggaactacagccaggggggataccataac
tctggctaccctccagatggccggggctaccagcctccggggccccccaaccatcaaggc
aactaccaggggggctaccagcagccggggagctaccagaggccgggctatgcgcctggg
cagccgggttaccagcaagaccagtttccgatgggaagtagcggcacaaactacggaaac
tcccaattggccaaacaactgctgaaccctccgcgcagcacgggccctgtgtttcaaggt
taccagggtgggaatatgtatccacctccccagaagcccggagccgctcccagtcctggc
cccactggccccaaccccccagccggatacagtacgagtccacgcagacaccctgacttt
gaaaagacatcagtaggatggcgtgggaacagccagtatggaggctacaccggccagaac
cagcagggtccccctcagcaggcgtggagtcgccccaatgactctgcgccgcctggagct
ccaacctcacagtggagtcagccacggtttcctgggccacaagggcagttccagaatgct
gttagtgctggacgagggtggtcaggtggatcctacacccaaaatgtagggcccagacct
cagggtcctcccaccaataagaactatcttgttccaccaccctcttcatttaagtgtggg
ggcagcatgtatggtgtttacactggcaaacatcagttccccctggatagtgtcgaggcg
gtgctgccggtgctggcacgaaggaagcgcatgacccgctctgaccttcctactcttgac
ccctggaggctactcatgtccttgcggtgtggtctggctgctgaagtgacatgggcccta
gatgtcctgaacattctcctgtttgatgaccaaacggtagtttactttggcctacaccac
atgccaggactcctggaggccctcattgaacacctcagaaggggccttatcaacatgttt
gacatatgttcagaactggagcttggcagtgatgagaaggccacgggagctaacaagagg
gtcaaggctatgcagcatgatgactcggacagaccctggtacttgcggccaccaccatcg
cccaccctcgagctggacctgggcaagctggaggatcacgacctgcagaacaaggaggag
atcttaaagggggccgaggacttcaccttggtcaccaagacgggcaagacggtcaagttc
gtgaagcgggatggtgagctgttcatgcgagaaggcagccgtgagtgggacaagtgggag
ggcttcagctcaggtgtggacacctggtcagtgggtggaggtgagtgcaccgcccacatc
atctgcagcatgcagagctcggtgccccccctgcccttcactcgcctcatgccctgcaag
gacggcaggattgaggagatgtcccttaagaaagagaagctgatagaggtcaaggaggag
gtggaaattaagaaggaagtggtagtggaagtgaaaaaagaggaaaagagtaagaaggat
aaagtggtggatgtgttggcagaattaaaggaaaagaaggtggagaagatggaggacctt
atttctagagaaaagtgtgacaactccaaagatactgagtcaacagacaaacttttcagt
caaaggataaatagagttaataatgcaaggaagagcaaactagacgaaatatttaagaag
ttaaagaaggaaccaatggaggaccatagtgacaataagaaaagggagacgaaggaagtg
tgtgtgttgaaaaaggacaatgaagtgcatgtagactgtagtgttgtggtgaaacaggaa
ccaagtagtgataagttaactgagagaaaacaagaggaagtatctcaaaataagccagaa
tctaaagaaaaattagaaaggcgtgaaagcagtggctccaagagggaaagtggaggattc
aaaagacctcatgaggatctagaggaggaatcatggagtccagatgaagcatcgttaagc
acaactactgaaggtcaggactggttaggtcgacgtgtcatgtgcgtgggtactgtgatc
cggaatctgtcctttattccaggaaatgaagaggtgatgagcaaatgcgcatctctgcta
gccttacttggcaagacaatcctgctgcaccatgagcaccccaaacgcaccccctccacg
gcgcattatgaccgtgatgaggaggcggacctgagcgactggtgcagctccctggctccg
gatacgcactggtggtggccctacctccaccatgtgcacgagaacacgctggtcaccctg
gctaacatggcaggcactcttgatttgtcaatttacccagaagagatctcacggcccttg
ttaaatggcctcctacactgggccacctgttctgcctcatatggtcaggatcccttccca
ggtggtggaacatctcttcagtctgcgttgtcacctcagcgtctcgccctggaggccctt
gttaagctctgtgtgctcgaccagaacacagacttagttctagctacaccaccttttaca
cggttagacagcctgtgtggccagctgacccgctttatgtgccgcggggaggaccaggtc
ctacgtgagttctccatcaacctcctccactatttctcagctgcagactctggtgtggct
agagtcatagccatgcagaatgggtgtgtctctctccttgtggctttcattgaggaggca
gaggctgcggcgatgaatgtggctaatgttcagggtgtgagtgccctcaaggagaaccct
gagctgatggggacgagcctggacatggtgcggcgggctgctaacacactggtgcacctt
tcgcgagtgccagctaatgctcgggttttagctaattgtgaaaacagactattgacattg
gtcatgagccagatacttgatacctatgttgcatctcagttgtcacaggtgttatttaat
gtagcccaagtgcaaaatgaatttccccaattatcaccttgcccttcaccaccatcatca
cccccaccaactacagcacaagcctcagagttaaccaaaactccagatgcaccaatggat
gtggactcatcaccattagatgcacccagccaacccacttctattaccacagccgtaaag
ctggtcaatcatgactccattttgaccgagtatgataagaccaatgctgcatcccccaat
cctgcttctgctccttctcccaaccctatttcagcacctaatgccacacctgtgcccacg
ccagcccctgcccctgtcccagccgttactccatctccagttcctgcctcagcctccacc
ccatcaaccccagcctctggcccagctgtaacacctgctacagcctctgctcctgcccct
gcccttgcccctaccacagccccggctcctgcctccgccccagcccctgctcctgctact
ccagcacctgcctcagcccctgcccctgccccagcccctgcggtgactcctgccattgca
cccaccccaactccaaccccagctgcttccctcgctcctgcacccacccacaccccagcc
tcggctccattctcaccacttccgtcagcccccgctgcgactcctgcaccagtacctaca
gctgtaccaagtctaggtaaagtcccaactcctaatttaacccctgcccccatctctgca
aacagccctgtatttaacccacaaaaaatgcccatgaagcccagcaatccccccacccaa
accacaaactccgagtcatctacaaagtgcgagtccctggcagcggcggcggccccggtc
cccatggaagcgtcagcagcaagtccctcatcttag
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integrated database retrieval system
