Penaeus chinensis (fleshy prawn): 125039504
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Entry
125039504 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125039504
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
90S particles
Other 90S particles
125039504
Pre-60S particles
Other pre-60S particles
125039504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
DUF3384
MMS19_C
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
125039504
NCBI-ProteinID:
XP_047489483
LinkDB
All DBs
Position
27:complement(2037845..2049744)
Genome browser
AA seq
1333 aa
AA seq
DB search
MKFKRTSGKGKRWKKGDSCVSNPENTKFRQAARGRFFQKIEGESGLTKEAVAQHEAALSN
VSDQMEHLGITPEDLQSAGKSCKTFATNFTTCTIPAFEKFFRDFSVSSEQHTRMLAIHAA
AQEYMRESGMPETSTSYFCALMISLEGISDSEEDVSATLALMAKVIRRVQVEVLRAKFGD
FAKRLDHIITLYQEAGNGSLLVNALGSMSVLLRAQMRDQWSYPYTNNLLQKILAFTVYDK
PKVRKAAHHDVTAVLKASCFMLDEGDEKVIHPAAGEVAEFCNAQLRASSEMGNTKTTLHL
LVLLRQVIESFPRKQLKGSCEGILSVMQLGNALINASAMQALYSVMVSKPSSEVFPSGTN
AALITALTTGTSGVPGSLAAVIPSMNDSQPACAWITVLTAALLNLFRTDEEEGMKYITTW
IVQLVPFWCSEHNNVHSKVFESFEALLEESIGKCSEEMKATENFQLQVQTLYQAIEGGMS
LQYQPAWVYVFKTLSKCFSTIGPLFPDLMMPCLRNLVTLVRDWNCPVRPHVEHCIGAAVK
GLGPKALMSVVPLQITGDIAEDEKHLWVLPLLRRHVKNTELTYFEDYFVHLAGKCFVILN
ALKEKGEGKSLLSKTYRTVENQIWGLLPSFCDKAKDVEKALSNEKFARVLCDHIKFRDDT
RIQVMAAMRNLINDNKENPGRLATYSKNYLPALFNVYLTKVRGKFDRGTEEPTIHQSQRL
AAYSTIKTYLEIVPKPKCNEFLNLIMNKYDAETDSFKKQAFLDLVRAFLPYMEIESFEKF
FDRVKPLLTETVNHKEQKAAYRLLEELLSVGTESSSQFITNNLKDLYEILLQSLTAASPP
SRAPRLRCIRQVLLNLKIDMEEEKRDTFLQQVVAETVMCCGKGMSTATRKAAFALLADVG
TTIQKQLQCTPEDTVRHSMKLFLAGLVGSPALAKNSIIAITSLTYQFKSIIPKDVLELLM
NNMCIQLLCKSREIVGACLSFFLATLSFMPVPVMSDYFENIFKTLCKIDPETQRKFRRRM
RDILSRLVRKFGSDRLMAMVPPGDGILQKRIRNLRKEEGRKKREREARRKQGEKVEDSED
EDLVRGAIPPSLDEILAEIDSGDDDRSDDDDDDNKGGRKGKREVKKKGLKEAWIKEDEDN
IVDLLDPTAGQAVLSKRPKLKARRPKEGSTGGFEVDENTGRIIIVDPDEKKKEKEKMGSS
NIEFMEDLDEFLEMKAGVKEGKIKQRKRNLSEGSEENEEPPNKVSGKGPSNVNSKKIAQK
KRFDYGSDFRMKKAKGDMMKKGKVMPYAYVQFTKDRLNKRKKAKFQGQFTSLVRGAKKGV
AKGSKQKMRGKKQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagaggacgagcgggaagggcaagaggtggaagaaaggagacagctgcgtg
tccaatcccgagaacaccaagtttagacaggcggcgaggggcagattttttcagaagatc
gaaggtgagagcggtttgaccaaagaggccgtcgcacagcatgaagcagctctcagcaat
gtctcagatcagatggagcatcttggcatcactccagaggaccttcagagtgctggaaag
tcctgtaaaacttttgcaactaacttcaccacatgcacaatcccagctttcgaaaaattt
tttcgggacttcagtgtatcttcagagcaacatacccgtatgttggctatccatgcagct
gctcaagagtatatgagggagtcaggcatgccagaaacatcaacatcttatttttgtgcc
ttaatgataagtctggagggcatcagcgacagtgaggaggacgtcagtgcgacccttgcc
ctcatggccaaggtgatccgtcgcgtccaagtggaagtgttacgcgccaagttcggtgac
tttgctaagagattggatcatattattacactgtatcaggaggccggcaatggtagcctg
cttgttaatgctcttgggtccatgtcggttctcctccgagcccagatgcgagaccagtgg
tcatacccctataccaacaacctgctacagaaaatactggctttcacggtctatgataag
ccaaaggtcagaaaagccgcccaccatgacgtcacagctgtcctgaaggcctcttgcttc
atgctggatgaaggagacgagaaggtgattcaccccgctgcaggggaggtggccgagttc
tgcaacgcgcagctgagggcttccagcgagatgggcaacaccaagacgacgctccacctc
ctggtcttgctccggcaagtcattgaatcttttccgcggaagcagttgaagggctcatgt
gagggcatcctatcagtgatgcagctcgggaacgcccttataaatgccagcgccatgcaa
gccctctacagtgtgatggtgtccaagccaagttctgaggttttcccgtcagggaccaat
gcagccctgatcacggccctcaccacaggcaccagtggcgtaccaggcagtttggcagca
gttataccaagcatgaatgattctcagcctgcctgtgcatggatcacagtccttacagct
gcgcttttgaatctctttaggactgatgaagaagagggaatgaagtacataacaacatgg
attgttcagcttgttccattctggtgcagtgagcacaataatgttcattcaaaggtgttt
gaatcctttgaagcactgctggaggaaagcataggaaagtgcagtgaagaaatgaaggca
actgaaaatttccaacttcaggtgcaaaccctttaccaagccattgagggaggcatgtca
ttgcagtaccagcctgcatgggtttatgtctttaaaaccctgtcaaaatgtttcagcact
attggccctcttttcccagatctgatgatgccatgcttgagaaacttggttacactggtg
agggactggaactgcccagtcaggccgcatgttgagcattgcattggcgctgctgttaaa
ggtctaggacccaaggccctgatgtcagttgtgccgctgcagatcacaggcgacattgct
gaggatgaaaagcacctgtgggttctccctcttctgaggagacatgtcaaaaatacagag
ttgacttactttgaggactattttgtgcacttggctggaaagtgtttcgtcatcctaaat
gcactgaaagagaaaggcgaagggaaatctctccttagcaaaacttacaggacagtagaa
aaccagatatggggcctgctgcctagtttctgtgacaaggccaaggatgtggaaaaggct
ttaagcaatgagaagtttgcccgcgtcctgtgtgatcacattaagttccgtgatgatacg
aggattcaggtcatggcggcaatgcgaaacctgattaatgataacaaggaaaatccaggc
aggttagccacatattcaaagaattacttgccagcactatttaatgtatacttgacaaag
gttaggggcaaatttgacagagggacggaggaacccacgattcatcaaagccagagattg
gctgcatattcaacaattaaaacgtacctagaaattgtacccaaacccaagtgtaatgaa
tttctaaacctaattatgaataagtatgatgcagagacagatagctttaagaagcaggca
ttccttgatctggttagagcattccttccttacatggaaattgaatcgtttgaaaaattc
tttgatagggtaaagccacttctcacagagacagtgaaccacaaggaacagaaagcagct
tacagactcctagaggaactcctcagtgtgggaacagagagcagctcacagttcatcaca
aataaccttaaagatctctatgaaatcctcctgcagtctctcacagctgcctccccacct
tcacgtgcaccaaggctgaggtgcatcaggcaggttctgttgaatctgaagattgatatg
gaggaggagaagcgagatactttcctacagcaggtcgttgccgagactgtcatgtgctgt
ggcaaaggaatgtccacagccacacggaaagcagcttttgcgctcctggctgatgtgggt
accaccatccagaagcaacttcaatgtaccccagaagacacggtacggcacagcatgaag
ctcttcctggcagggttggttggctctcctgctctggcaaagaattccataattgccatc
acatccctcacatatcagtttaaaagtatcatcccaaaggatgtgctagagcttctgatg
aacaacatgtgcatccaactgctttgcaagtccagagagattgtgggagcttgcttgtcc
ttcttcttggctactctctcatttatgccagtccctgtcatgtctgattattttgagaac
atcttcaagaccctctgcaaaatagacccggaaacccagcgcaaattccgcagaagaatg
cgtgacattctaagcagacttgtgaggaagtttggcagtgatcgcctcatggcaatggta
ccaccgggagacggcatcttacagaagcgaatccgcaatctccgtaaggaagaaggaagg
aagaagagagagagagaagctaggaggaagcagggagagaaagtagaagatagtgaagac
gaagatttggttagaggagccattccaccaagtttggatgagattcttgcggagatcgac
tcgggtgatgatgacaggagtgatgatgacgacgacgacaataaaggtggaaggaaagga
aagagagaagttaagaagaaggggctaaaggaagcctggattaaagaggacgaggacaac
attgtggatctccttgacccaacggccggccaagcagtgctctccaagagacccaagttg
aaggccaggcgtcctaaagagggcagtacaggtggatttgaggtggacgagaatacaggc
cgcatcatcatcgttgatccagatgagaagaagaaggaaaaggagaagatggggtcttct
aatatagaattcatggaggatcttgacgagttcttggaaatgaaggcaggtgtcaaggaa
ggcaagattaaacaacgcaagaggaatttgagtgagggttcagaagagaatgaagaaccc
cccaataaggtgtctggaaagggcccaagcaatgtaaacagcaagaagatagcacagaag
aaacgctttgactacggctcagatttccgcatgaagaaggcaaagggagatatgatgaag
aaggggaaggttatgccatatgcttatgtgcagttcaccaaagacagacttaataagagg
aaaaaggccaaattccaaggtcagttcaccagtttggtccgaggtgccaagaagggagtg
gccaagggttcgaaacagaagatgaggggcaagaagcagtaa
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