Penaeus chinensis (fleshy prawn): 125040528
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Entry
125040528 CDS
T08118
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125040528
03036 Chromosome and associated proteins [BR:
pchn03036
]
125040528
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125040528
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125040528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
Spt6_S1
HHH_3
S1
Tex_YqgF
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
125040528
NCBI-ProteinID:
XP_047491052
LinkDB
All DBs
Position
29:complement(32309638..32325534)
Genome browser
AA seq
1781 aa
AA seq
DB search
MSHFIDSEAEESEEEEEEYGEEEKKKLKKLKKSVEDSSEEEDEDEEMIQEENKGFINDDD
DEEEDEGGSDSEVEGKRKRDDDDDDDLDGDNLDEDDLDLIEENIGVKLDRKKKFKRLKRI
EDEDSDAEEEDVQGQIRREIFEGSGDEDDEEAAPAPQVPQQPETYASEEEEEESDGEGSF
IVDDDGKPIAKTKKKAIFEDEGLEAARDIFGCDFDYGEFEQYEDYDEGEDEEEEDDDDYE
EDEDVEGRERRHRRKERRKPIKKSIYEVFEPSELERGHLTDQDHEIRKSDVPERFQLRQI
PVTRTRGEGDDRATDKELDQEAKWIYHHAFFKPYISNQEGRDEAKLRSRRDMNMIQKIYN
ALDLMRNSTCEVPFIAFYRKEEVQPELNIHDLWKVYRWDEKWCQLKRRKENLRSRFQMMS
EFQGDLIMKDLDAPLPENVRMLKEEDIERMDELETSEQFNDCYKQFLLYYGKELPDMHEH
MKAKNKERQNTVRATKKENEMEKDKENDEEVDKENEEVEDEPQQATEDTDALKKAVRRHE
YELLRKAGIEALTKKFGLTPEQFGENLRDNYQRFDCEQCQEDPLKEAEEHISKMCSTPER
VLEAAVRMVGWQLACEPLVRRTVREAYFERARISARPTPQGLKIVDEHHPLYPIKYLKDK
PVTDLQGDQFLRLKCGVEDKLMTISLSDTIEGNTSLSYLDEMKQLYYRDEFSQVVQDWND
LRGRAVTFAFKRIIEDLKRELSQRLLQESKDHVIEQCCSKLYNWIKIAPYNPGDFSDEDE
DDWDTSKGFRVFSIAYVPDLSQAAFGCCIDIDGDCCEYIRLPHLLKRRNAYNERDALAKE
NDIRRMQEFIIRRKPHVVAVSGESREGFMVKEDLIQILKDLEEQEQFPKINVEIIDNDLA
HIYAMSKKGESDFLDYPPLLRQAISIGRRIQDPLIEFSQLCNADDELLNIKFHSLQDQIN
NAELLDSLYTEFVNRTNEVGVDLNRAVAYPYTQNLVQFVCGLGPRKANLLIKNMKQNNQR
LENRNQLVVNFHMGPKVFINCAGFIKIDTNALGDSDNYIEVLDSTRIHPEAYDWARKMAV
DALEYEDEEGKPAEALEEILETPERLSELDLEAFATELQNQGFGKKNTTLYDIRHELNHR
YKDFRMPFRSPTPEEIFNILTKESPETFYVGKLVQVTVTNFIHRKPRGDQLDNANPVRNE
DTGLWQCPFCLKNDFPELSEVWNHFDAGDCPGQAIGIRVRLDNGISGFISIKNLSDKTVT
NPAERVKRNGIVLCRIMKIDPEKFSVELTSRTSDLQDRDGKWKAPKDAYYDYETEEKDMN
SSRKKMDKKKTQYQKRVIAHPSFRNIDYNEAEKVMQHLEQGEVIIRPSSKGVDHLTATWK
VTEGICQHIDIREQDKQNDFSLGQKLWIMNEEFEDLDEIIARYISPMAINVRQILEYKYY
KESVMGDKNKASEILKEDKKKNPKTIPYLFSPRKDLPGKFMLSYLPRVKVIHEFVTVTPE
GFKFRGRMQHPNLASLLKWFKVNFRRPAPSMGATPGMMSTRTPYMGGTTPNLMGVDASTI
QKVAQNLNPHMLHNLSQAATNTPYGAHTPGAFSQGYSNYANTPYTPSGQTPFMTPYATPG
PSTTPRYSGSQTPSYSSVGNRTPSHRPSTGHSSQPSRSTPSASSRSEQMDWKMAAAAWVQ
AKGGGGGGSARDAGRSTPRHHDGGRSTPRYSEPRDSRYASSSSYPDDGSRRTPRYDDRTP
RPYHDYDNPRATPRSARSTPKTIHSPTNMSIGGDQTPLYDE
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacttcatagattcagaggcagaggagagtgaggaggaagaggaggagtatggg
gaggaggaaaagaagaaactcaagaaactcaagaaatctgtagaagactcatcagaggag
gaggatgaagatgaggaaatgatccaagaggaaaacaaaggatttatcaatgatgatgat
gatgaagaggaagatgaagggggatcagacagtgaagtggaaggaaaaagaaaacgagac
gatgacgacgatgatgacttggacggagacaacttagatgaggatgatcttgatctcatt
gaagaaaatataggtgtgaaactagacagaaagaaaaaattcaaacgtctaaagagaata
gaagatgaagattcagatgctgaggaagaggacgttcagggacagatcaggagagaaatc
ttcgagggatcgggtgatgaggacgatgaagaggctgcccccgccccacaggtcccccag
cagcctgagacctatgcctcggaagaggaagaagaagaatctgatggtgaaggaagcttc
attgtggatgatgatggcaagcccatcgccaagacaaagaagaaggccatctttgaggac
gagggtctcgaggctgcaagagacatcttcggttgtgacttcgactatggagagtttgag
cagtatgaagattatgatgaaggtgaagatgaagaggaggaagatgatgatgattatgag
gaagacgaagatgttgaggggagagagagacggcatcgtagaaaggaacgcaggaagcct
atcaagaaatccatctacgaggtcttcgagcctagtgaacttgagcgaggtcacctcaca
gaccaggatcatgaaatccgcaagtcggacgtccctgaaaggttccagctacggcagatc
cctgtaacacgcacaagaggagagggtgacgaccgcgctacagacaaggagctcgatcaa
gaggccaagtggatttatcatcatgcattcttcaagccatatatatcaaaccaggaagga
cgtgacgaagccaagctccgctcccgccgtgacatgaacatgattcagaagatctacaat
gccctggatctgatgaggaattccacgtgtgaggttcccttcattgccttctacaggaag
gaggaagtccagccggagctgaacattcacgacctgtggaaggtctaccgttgggatgaa
aagtggtgtcagctgaagcgccgaaaggagaacctgcggtcaaggttccagatgatgtcg
gaattccagggtgacctgatcatgaaggacctcgatgcaccccttccagagaatgtgagg
atgctcaaggaagaggatattgagagaatggatgaattggagacctctgagcagtttaat
gattgctacaagcagttcttgctttactatggaaaggaactgcctgacatgcatgagcac
atgaaggccaagaacaaagaaaggcagaatacagtgcgtgctacaaagaaggaaaatgaa
atggaaaaagacaaggaaaatgatgaagaggtagacaaagagaatgaggaagtggaggat
gagccacaacaagctacagaggacactgatgcactgaagaaggcagtgaggcggcatgag
tacgaactcctaaggaaagctggcattgaggcattgaccaagaagtttggtctgacacca
gaacagtttggtgaaaatttgcgcgacaactaccagagattcgattgtgaacagtgccag
gaggaccctctcaaggaggctgaggagcacatctcaaagatgtgttctactcctgaaaga
gtgttggaagctgctgtgaggatggttgggtggcagttagcatgtgaaccccttgtccgc
cgtacagtgcgtgaagcgtattttgagcgagcaaggatcagtgccagacctacccctcag
ggcctaaagatcgtagacgaacaccacccactctatcccatcaaatacttgaaggacaaa
cctgtcacagacctgcagggagaccagttcctgagactcaagtgtggggtagaggataaa
ctcatgaccattagtctgtctgacaccattgagggcaatacctcgctgagctatttggac
gaaatgaagcagttgtactatcgggacgagttctcccaagtggtccaagactggaatgac
ttgagagggcgagcagtgacctttgccttcaagaggattatagaagacctgaagagagag
ctgtcccagagactgctgcaggagtccaaggaccatgtgattgagcagtgctgcagcaaa
ctatacaactggattaagatcgcaccttacaaccctggcgacttctccgacgaggacgag
gatgattgggatacctccaagggcttcagggtcttctccatcgcctatgtgcccgatctg
tcacaggctgcctttgggtgctgcattgacatcgatggagattgttgtgagtacatacgc
cttcctcacttgctcaagcgacgcaatgcctacaatgagagggatgctcttgctaaggaa
aatgacatcaggcggatgcaggagttcatcattcggcgcaaaccccatgtagtggctgtc
agcggagagtccagggaaggcttcatggtcaaggaagacctgatacagattttaaaagat
ctggaagagcaggagcagttccccaagatcaatgtggagattattgacaatgacttggcc
cacatttatgccatgtccaagaagggtgagtctgatttcctggactatcctcccctgctg
cgacaggccatctccattggccgccgaatccaagatcctctaatcgagttttcacagtta
tgcaatgctgatgatgagttgctcaatataaagttccattcactgcaagatcaaataaat
aatgctgaactccttgattctttgtacactgaatttgttaatcgtacaaatgaagttggt
gttgacttgaatcgtgctgtggcttacccatatactcagaacttagtgcagtttgtgtgt
ggcttgggacctcgtaaagctaaccttctcataaagaacatgaagcagaataatcagcgt
ttagagaatcgaaaccagctggtggtcaatttccacatgggtcccaaagtatttattaat
tgtgccggattcattaaaattgacaccaatgctctaggagatagtgataattatattgaa
gttctcgattcaacacgtattcatccagaggcatatgactgggcgagaaaaatggcagtc
gatgccttggagtatgaggacgaggaaggcaaacctgcagaagctttggaagaaatttta
gaaactcctgaacgactgagtgaattagatttagaagctttcgcgactgaactccagaac
caaggctttggtaagaagaacacaaccttgtatgacataagacacgagttgaatcacaga
tacaaggacttcaggatgcctttcagatctcccactccagaggaaatcttcaacatcttg
accaaagagtccccagaaacattttatgtcggaaaattagtgcaagtgacagtaaccaat
ttcatccaccgaaagcccagaggagatcagctggacaatgccaaccctgtcagaaacgaa
gatacgggtctctggcagtgtccattctgcctgaagaatgacttccccgagcttagtgag
gtgtggaatcattttgatgcaggggattgccctggccaggccattggcatccgtgtacgc
ttggacaatgggatatctgggtttattagcattaagaatttgtcagacaagacagtgact
aatccagcagagagagtgaagagaaatggcattgtgttgtgtcgcatcatgaagatcgac
ccagagaagttttcggtcgaacttacctctcgaacctccgaccttcaggatcgcgatggc
aagtggaaggctcctaaggatgcatactacgactatgagacagaggagaaggacatgaac
agcagtaggaagaaaatggacaagaagaagacacagtaccagaagcgtgtcattgctcat
ccatccttcaggaatattgactacaatgaagccgagaaggtgatgcagcacctcgagcaa
ggagaggtcataatccggccctcgagcaagggcgtcgatcacctcacggcgacgtggaag
gtcaccgaaggcatctgccagcacattgacattcgggaacaggacaagcaaaatgacttc
tctctcggccagaagttgtggatcatgaacgaagaatttgaggatctagacgaaatcatt
gccagatacatttcgccaatggcgataaacgtccgccagatattggaatacaagtattac
aaagaatccgtcatgggcgacaaaaacaaggcctccgagatcttgaaggaggacaaaaag
aagaaccccaagaccattccctatctgttttcgccgaggaaggacctgccgggcaagttc
atgctgtcctacctgccgcgcgtgaaggtaatccacgagttcgtgacggtgacgcccgag
ggcttcaagttccgcggccggatgcagcaccccaacctggcgtcgctcctcaagtggttc
aaggtgaacttccggcggcccgcgcccagcatgggggccacgccgggcatgatgtccacg
cgcacaccctacatgggtggcacgacgcccaacctgatgggcgtcgacgcctccaccatc
cagaaggtggcacaaaacctcaacccccacatgctgcacaacctgtctcaggcagctacg
aacacgccctacggagcgcacaccccaggggcgttttctcaaggctactccaattacgcc
aataccccgtacacgccctccggccagacgcccttcatgacgccctacgccacgcctggc
ccctctaccaccccgcgctacagcggctctcagacgccctcgtactcgagcgtcggaaac
cgcacgccctcgcaccgcccctccaccggccacagcagccagccgtcgcggtccacgccc
tccgccagcagccgctcggagcagatggactggaagatggcggcggccgcgtgggtgcag
gccaagggcggcggcggcggcggcagcgcccgcgacgcagggaggtccaccccgagacac
cacgacggagggcgaagcacgccgcgctactcggagccccgcgactcgcgctacgcttcg
agctccagctaccccgacgacgggtcgcgacgcaccccgcgctacgacgaccgcacgccg
cgcccctaccacgactacgacaacccgcgcgccacgccccgctcggcgcgctccacgccc
aagaccatccactcgcccaccaacatgagcatcgggggggaccagacgccgctctacgac
gagtag
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integrated database retrieval system
