Penaeus chinensis (fleshy prawn): 125040660
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Entry
125040660 CDS
T08118
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125040660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125040660
03036 Chromosome and associated proteins [BR:
pchn03036
]
125040660
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125040660
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125040660
PBAF complex
125040660
GBAF(ncBAF) complex
125040660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
125040660
NCBI-ProteinID:
XP_047491285
LinkDB
All DBs
Position
29:17361615..17378142
Genome browser
AA seq
935 aa
AA seq
DB search
MAINPRKDGGPNIKYYESAETVSRFENVKTWLTKNAKKYVAADPPTNKGLSQLVIQLLQF
MEDNCGQKVTKPPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDA
NIELFREIEKSLVANKCWTKPAVYIHNDVDKELRNELKDIVKRHDGKIVEEEDDATHIVY
EDQDPLDDEFARGAMRRDKQTLFHFYYMPDSYDSWAAGVELDYDPPESPQFPDHQWKVCA
NWLQDLESYNEWMNEEDYEVDENGQKKKHSGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RSKRKGGRSNATPGKPVKKTKTEEEEEDLTRDMEDPVAEPAVTEVTTGSKIQPSKGGNYM
DLDEEAADKTEKTEGQPVPDSEDTATDQTHHIIVPSYAAWFDYNAIHAIEKRGLPEFFNG
KNRSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHAFLEQWGLINY
QVDADARPTPMGPPPTSHFHVLADTPAGLQSINPPKVNQPSAAKQLMDFDKKPIDKKPEF
GIGTEFGLKLDQYSKKTGALKNKSAASQAREWTEQETLLLLEALEMYKDDWNKVCEHVGT
RTQDECILQFLRLPIEDPYLEDPEAGSGPTPTALGPLAYQPIPFSKSGNPIMSTVAFLAS
VVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADNAASNEGKVDPTAGLAKSGIA
GTEPEGEEKKEGEGEAEKKDEAKKDGEKKEEEKKEEADKEKKEEAMEVDKPEEKKPEEKK
EVEEEEKKEEKEVKEEKKEESPEEKKLDAERERLRKDASVQQAASAALGSAAVKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERESLELQRQQLLQERQQFHLEQ
LKAAEMRARQHALHQLTQGASPAHSPAPAMAQVHT
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacccgcgcaaggacggaggccccaacatcaagtattatgagtccgcggag
accgtctcccgcttcgagaatgtcaagacgtggctgacgaagaacgccaagaagtatgtg
gctgcagatccaccaaccaacaagggcctgtcccagttggttattcaactcctacagttt
atggaagataactgtggccaaaaggtcactaaacctccaatgacaaaattaccaatgaaa
tgtttccttgactttaaacctggaggtggactttgccacatacttagcacagtttacaaa
ttcaaaagtgaccaaggatggcgaaggtttgatttccagtcaccatcaaggaaggatgca
aacattgaactcttccgggagattgagaagtccttggtggcaaacaaatgctggaccaaa
cctgcagtctatatccacaatgatgttgataaagaattgagaaatgaactgaaagatata
gtgaaaagacatgatggcaagattgtagaagaggaagatgatgccacacacattgtatat
gaagaccaagaccccttggatgatgagtttgcacgtggagccatgcgtcgtgacaagcag
actctcttccacttttactatatgcctgactcatatgactcttgggctgcaggagttgag
ctagactatgatcctccagaatcaccacagttccctgaccaccagtggaaggtctgtgct
aattggttgcaagatttagagtcctacaatgaatggatgaatgaggaggactatgaagta
gatgaaaatgggcagaagaagaaacatagtggctgcctgagtgttgatgatacaatggga
ctcagtgatccagataaaaaaaagaaagcgaaaaagcggcctcgatctccaccttctcca
cgttctaagaggaaaggaggcagaagcaatgctacccctggaaagccagtgaagaaaaca
aagactgaggaggaagaggaagatctgacacgagatatggaagaccctgttgccgagcca
gctgtcactgaggttaccactggttccaaaattcagcctagcaagggaggaaattacatg
gaccttgatgaggaagcagctgataagacagagaaaacagaaggacagccagtgccagac
agtgaggacacagccacagatcaaacccatcacatcattgtgcccagctatgctgcctgg
tttgactacaatgccattcatgccattgaaaagagagggctgccagaattcttcaatggc
aagaacaggtccaagactcctgaaatatatttggcctacagaaacttcatgattgacact
tatcgattaaacccaacagagtacctgacctctacagcttgtcgccgcaacctggcgggt
gatgtctgtgcagttatgcgtgtccatgctttcttggaacagtgggggctaatcaattat
caggttgatgcagatgcccgtccaacccctatgggtcctcctcctacctctcatttccat
gtgttggctgacactcctgctggtctgcaatccatcaatcctccaaaggtcaatcagcca
tcagcagctaagcaacttatggacttcgacaagaagcctatagataagaaaccagaattt
ggtattggtactgaatttggtctgaaattggatcagtattctaagaaaactggagctctc
aagaacaagtcagcagcaagtcaggccagagaatggactgaacaggaaactctgcttttg
ctagaggcccttgaaatgtacaaggatgactggaacaaggtttgtgagcacgtgggtacc
agaacacaagacgaatgtatcctacagttcttgcgcctccccattgaggatccttaccta
gaagatcccgaggctggcagtggacccacccctacagcccttggacctcttgcttaccaa
cccatccccttcagcaaatctggaaacccaattatgtccacagtggctttcttggcatct
gttgttgaccccaggattgctgcttctgcagccaaggcagccatggatgagttctgcagg
atcaaggacgaggtcccggctgctctccttgactcgcacatcaagaatgttgccgataac
gctgcctccaatgaaggaaaggttgatcccactgctggcttggccaagtctggcattgct
ggcaccgaaccagaaggtgaggagaagaaggaaggggaaggagaggcggagaagaaggat
gaggcaaagaaggatggggagaagaaggaagaagaaaagaaggaggaagctgacaaggag
aagaaggaagaagccatggaagttgacaaaccagaagaaaagaagccagaagagaagaag
gaggttgaagaggaagaaaagaaagaagaaaaggaagttaaggaagaaaagaaggaggaa
agtccagaagagaagaagttggatgctgaacgagaaagattacgcaaagatgcctctgtt
cagcaagcagccagtgcagctcttggttcagccgcagtcaaggctaaacatctggctgcg
gtcgaggagaggaagatcaagtctctggttgctcttctggtggagacgcagatgaagaaa
ctggaaatcaaactacgtcactttgaggaactcgagaccatcatggaccgggagcgagag
agtttggagctgcagaggcagcagctattacaagagcggcaacagttccacctggagcag
ttgaaggctgccgaaatgcgagcccgccagcacgcattgcaccaactcacacagggagca
agtccggcccattcgcctgcaccagccatggctcaggttcatacgtga
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