Penaeus chinensis (fleshy prawn): 125040809
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Entry
125040809 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 1-like
KO
K27396
protein Smaug
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125040809
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125040809
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GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
125040809
NCBI-ProteinID:
XP_047491503
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Position
29:complement(5671974..5678866)
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AA seq
602 aa
AA seq
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MVLALTIIVFPFSLLTLTIVLAGFNNNNTVGSGSNLTGSKSRWNDPPLIPNPDTGQDDMS
WCGGGASAAVGAPGDAPQSPNNSATSSRSSGCDSNTEEPCQPHPGMRDVGVWLKSLRLHK
YSPLLCNLTYEELLALDEATLESQGVTKGARHKIVLSIAKLKERHKQLVQIEKEVMNGGN
LFCCLNDLKSIILTPFPPYTPPTDKGQPPPPPHSQSTPRPSPATSSTSSLSSSLPPASSS
SSSSSTPTSTSTFSSISSSCSSSITTTTTTSSASSLPTSSSSSACSLRGDEREALKEEQG
EASRPAVEGDGGSSIPEDDLPSQFTRVMGKVCTQLLVSVRPEDECVTAFLGLVEKCVNHE
AFTLAQTRRLQSWKQQIIRVWHPLPPKTKDSRHTRRWSQQYGGDGFIGGSFRVPRVGGQR
HSHIPAGLLMGGKGFPAPQPHPLFPLPPAAAAAAAASLGGLMSPRNSLPGLPSLGVGGLL
SPQQFLAKRPSLQETPSEQLRPHITLQRTRSAPSRPHQLPLSGHARSVPPPSTSLAPGTT
ACSDLRLSGASGTSGTVLEQHFSPATSYSHLGPPPSSPDPADNDITDRLESLCLSVTEHA
LG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtacttgcattgactataattgttttccccttcagtttacttacattgactattgtt
ctggcaggcttcaacaacaacaacacagtgggctcaggaagcaatctcacgggcagcaag
tctcgatggaatgacccacctctcatccccaatccagatacaggacaagatgacatgagc
tggtgcggagggggagcgtcagcagctgtgggagcccccggtgatgccccacagtctccc
aacaactcggcaacgtcatccaggtcctcaggctgcgactccaacaccgaagagccgtgc
cagcctcatccaggcatgagagatgttggagtatggctcaagtccctgcgtttgcacaaa
tactctccactgttatgcaacctcacctacgaagagctgctggccctagatgaagctacc
ctggagagccaaggggtgactaagggggctcgacataaaattgtcttgtccatcgccaag
ctaaaagaacgtcacaagcagcttgtccaaatcgagaaggaagtgatgaatggcggcaac
ctcttctgctgcctcaacgacctcaagtccatcatcctcacccccttccccccctacact
cctcccaccgacaaagggcagccacctcccccacctcattcccagtccactccccgcccg
agccctgccacttcctccacgtcctccctgtcttcctccctgcctcctgcctcatcctct
tcttcctcttcttccacacctacctccacctccaccttctcctccatatcctcctcctgc
tcttcctccattaccacaactaccaccacctcatctgcatcctcgctacccacttcctcc
tcctcctcggcatgttcgctgagaggggacgagagagaggccttgaaggaggagcagggt
gaggcttccaggccagccgttgagggagacggaggcagctccatccctgaggatgacctg
ccttcccagttcaccagggtcatggggaaagtgtgcacgcagttactggtcagtgttagg
ccggaggacgagtgcgtgacggcattcctaggtctggtggaaaagtgcgtgaaccatgag
gcattcacactggcacagacgagacggcttcagtcatggaagcagcagatcatccgcgtg
tggcaccctctgcctcccaagaccaaggacagccgccacacccgtcggtggagtcagcag
tatggaggtgatgggttcattggtggttccttcagagtccctcgagttggtgggcagcgg
cactcgcacatccccgcaggacttctcatgggcggcaagggcttccccgcgccgcagcca
cacccgctcttcccgcttcctcctgctgccgctgctgctgctgctgcgagtctcggaggc
ctcatgagtcctcggaatagcctgccaggcttgccctcacttggtgttggtggcctgctg
tctccacaacagttccttgccaaacgaccttcactgcaggagaccccttctgagcagttg
cggccccacatcacgctgcagaggacccgctcggccccgtcccgtccccaccagttacct
ctgagcggccatgcgcgctccgtgcccccgcccagcacgagcctcgcccccggcaccact
gcgtgcagtgacctccgcctatcaggagcctcagggacttcagggacggtcctcgagcag
cacttctccccggcgacatcctactcacacctcgggccccctccatcgtcgccggaccca
gcagacaatgatatcacggaccgccttgagtcactctgtctctctgtcacagagcatgct
ctgggctaa
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