Penaeus chinensis (fleshy prawn): 125041591
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Entry
125041591 CDS
T08118
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03030
DNA replication
pchn03410
Base excision repair
pchn03420
Nucleotide excision repair
pchn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125041591
03410 Base excision repair
125041591
03420 Nucleotide excision repair
125041591
03430 Mismatch repair
125041591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125041591
03036 Chromosome and associated proteins [BR:
pchn03036
]
125041591
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125041591
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125041591
DNA Replication Termination Factors
ELG1-RFC complex
125041591
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125041591
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125041591
Check point factors
HRAD17(Rad24)-RFC complex
125041591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_11
AAA_24
RuvB_N
AAA_assoc_2
AAA_16
ResIII
DEAD
AAA_5
RCF1-5-like_lid
DUF815
AAA_7
AAA_30
AAA_19
BrkDBD
PhoH
ATPase_2
Mg_chelatase
Cas_NE0113
bpMoxR
Thioredoxin_6
AAA_28
AAA_2
AAA_3
Motif
Other DBs
NCBI-GeneID:
125041591
NCBI-ProteinID:
XP_047492595
LinkDB
All DBs
Position
30:complement(579757..607265)
Genome browser
AA seq
334 aa
AA seq
DB search
MGLQDEDRSRNLPWVEKYRPKTLQDLISHEDIISTIQHFIDEDHLPHLLFYGPPGTGKTS
TILACARRLYSPKEFNSMVLELNASDDRGINVVRDQILSFASTRTIFKSGFKLIILDEAD
AMTNDAQNALRRIVEKFTENVRFCLICNYLSKIIPAIQSRCTRFRFGPLSSEQILPRLNY
VIEEEGVQVTEDGKKALLALSGGDMRKVLNILQSTAMAYNEVSEDNVYTCVGHPLRSDIT
NIINWMLNEDFQLAYKNVSELKTAKGLALQDILTEIHTYIHRIDFPVEVRIHLVERLSDI
EVRLCSGASEKIQLSAVLAAFAQAKHMVATQAVA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcaggacgaggaccgaagcaggaacctcccgtgggttgagaaataccgtccc
aagactttgcaggacttgatatcacatgaagacatcatatccacaatccaacacttcatc
gatgaggaccacctaccccatttgctgttctatggacccccaggaacaggcaagacgtct
actatcttggcctgtgccagaagactgtattcacccaaagaattcaactctatggtcttg
gagttgaatgcttcagatgaccgtggtattaatgttgttagagaccagatcctaagcttt
gcaagtactcgaaccatttttaaatctggctttaagttgattattcttgatgaagctgat
gcaatgactaatgatgcccagaatgcacttaggagaattgtggaaaagtttacagaaaac
gttcgcttttgcctcatctgcaactaccttagtaaaataattcctgccattcagtcacgc
tgtacacgcttcaggtttggccctttatcatcggaacagatccttcctcgcctcaattat
gtcattgaagaagaaggtgttcaagtgacagaggatggaaagaaagcactgctagccctt
tcaggaggggacatgcggaaggttctaaacattttgcagtccactgccatggcttacaat
gaggtctctgaggataatgtgtacacctgtgttggtcacccccttcgttctgatatcaca
aacatcatcaactggatgctgaatgaagatttccagcttgcctacaaaaatgtttctgaa
ctaaaaactgccaaaggacttgcattacaagacatcttaacagagattcatacctacatt
cacagaattgattttccagtagaagtaagaattcatcttgtggaacggctatcagacata
gaagtgcggctgtgctctggggcttcagaaaaaatacagttgtcagcagttctagctgcc
tttgcccaagcaaaacacatggtagcaacccaggcagttgcttag
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integrated database retrieval system
