Penaeus chinensis (fleshy prawn): 125041878
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Entry
125041878 CDS
T08118
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125041878
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pchn01002
]
125041878
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125041878
03036 Chromosome and associated proteins [BR:
pchn03036
]
125041878
Peptidases and inhibitors [BR:
pchn01002
]
Metallo peptidases
Family M1
125041878
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125041878
Coactivators
SAGA/TFTC/STAGA complex
125041878
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125041878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
125041878
NCBI-ProteinID:
XP_047493207
LinkDB
All DBs
Position
31:complement(8932677..8947301)
Genome browser
AA seq
1235 aa
AA seq
DB search
MPLNFKQKGPLKAFKEIGRETKMKDLSAKNPKGSGETKGQNPHKMKKDKEIVKPYKLSHQ
ILSLTGINFTRQTVIGFTELTLIPSKDSIRYIWLNCKQCCVYRVTLNDTLEVQFQYSDPL
LEVCQQDSKQRNLEYLNKAQLTGVTAVDPEIGRGELVITVPLEAQHMIQEGKPLRVGVEF
SLEKPQSGLHFVVPNTEGTLIEKGAHMFTYGNENSARLWFPCIDTWSEVCTWRLEFTVDD
FMTAVSCGDLLEVVYTQDMRRKTFHYYLSTPTCAPNIALVVGPFEIYVDPFMNEITHFCL
PNLLPLMKATSKYLHEAFEFYEELLSTRYPYSCYKQVYVDEAYNSLHSYATMSILDVNLL
CSNRIIDQVYQTRKTMALCVAQQFFGCFLSRYSWADAWLTTGIANYLMSLYVKKHFGFNE
YKDWIHSELRDIIDYEERFGGIVLDPSSSPNEPQNGPNVPLSQSSSANKDTFYFSVKNPH
ASSPHYIDVYYKKAHLIIRMLEFRIGQELMMQVFNKHLSLALIAVGNKGHPAGWANMLLS
TATFTKAIFTVTGKDITVFCDQWVRQGGHAKFNMKFLFNRKRNIVEMTIEQGYIGELGIR
RYVGPLVVWIQELDGTFKHTLQIEHQVSKKEIVCHSKSRRNKKKKIPLCTGEEVDMDLSH
LDADSPVLWLRLDPDMTLMRAVEVEQPDNQWQYQLRHERDVTAQTEAINALLRLAKQGAV
TTEMRNTLNAVLENEQCFYKVRCRAAHCLTRVANAMVANWNGPPAMMQIFRKMFGSFSCP
NIIRQHDFTSLQNYYILKTLPVAMAGLRNTHKQCPPEVLGFLMDLFKYSDNSKNRYSDNY
YRSALVDALAAAVSPALVQHDPATITSDTLTEDMKRILSEIVRYLNLEKMLPCYKYTVTV
SCLRALRVLQKNGHLPPKSDIFKAYAAYPQYIDVRLAAIEQIVDFLIRDGTREDMDFLLT
LAESDPVPMVRYRTLVLLAKNPPFIMGQSHKLDTQQLVDRLWNFMNSGQPCDSRVRCAVL
DLYYAMYGRRRPACIPASEPALVLNLRKPPNPPIINPVIVKEEEEQKVLPLKREAPPDDV
FPELKTEIKNEVNEMPVEVIFTEDSKVRIKQDDVEVFDEEVDCTVTPSMPTSIDGDISES
TTSLPGECHTVAGAPTGFDSDMFRTGSADSHGKSHKSKKKKKDKKHKKHKKHKHEHKDKD
KLDKLDKFIQEENLSSGSSNPPSPASPNMPSSMTF
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaaattttaagcagaagggtccccttaaagctttcaaagaaatagggagagaa
actaagatgaaggatttgtcagcaaaaaaccccaaggggtctggggaaaccaaaggccag
aatccccacaagatgaaaaaagacaaagagatcgtaaaaccttacaaattgtctcatcag
attctaagtttgacagggataaatttcactaggcagacagttattggatttactgaacta
acattgatcccatctaaggacagcatccgatacatctggttgaattgtaaacaatgttgt
gtttatcgtgtgactctgaatgacactcttgaagtacagttccagtactctgatcccctt
cttgaagtatgccagcaagattccaaacagaggaatctcgagtacctcaacaaagcccag
ctaacaggggttactgcagtagacccagagatagggcgaggagaacttgttataacagtt
cccttagaagctcagcatatgatccaggaagggaaacctttacgtgttggagttgaattt
tccctggaaaaacctcagtcaggtttgcattttgtggtgcctaatacagaaggaacatta
attgagaaaggggcacacatgttcacatatggcaatgaaaatagtgctcgattatggttt
ccctgtattgatacctggagtgaagtatgcacttggagactggagttcacagttgatgat
tttatgacagctgtaagctgtggtgacctcttagaggttgtctacacacaggatatgaga
aggaaaacttttcactactatctctcaaccccaacatgtgccccaaatattgctcttgtt
gttggaccctttgagatatatgtggatcccttcatgaatgagatcacccatttttgtctc
ccaaatttgctgcctctcatgaaggcaacaagcaaataccttcatgaagctttcgaattc
tatgaggaacttctttcaacaagatatccttactcatgttacaaacaagtttatgttgat
gaagcatataatagtcttcactcttatgcaaccatgagcattcttgatgtgaatttgctc
tgtagtaacagaattattgaccaagtttatcaaaccagaaaaacaatggctctttgtgtg
gcacagcaattctttggatgttttctctcccgctactcctgggctgatgcctggctaaca
acaggcattgccaactacctgatgagtctctatgtcaagaagcattttggcttcaatgaa
tacaaagattggatacacagtgaattgagagatattatagactatgaagaaaggtttgga
gggatagtgctagatccaagttcatctcccaatgagccacagaatggcccaaatgttcct
ctttctcaaagcagcagtgccaacaaggacaccttttatttctcggtcaaaaaccctcat
gcctcttctcctcattacattgatgtgtattacaagaaagcccatttaattatacggatg
ctggagttccgtattggtcaggaattaatgatgcaggtattcaacaaacatctgtccctt
gcactgattgctgttggcaataaaggacatcctgctggttgggcaaacatgctcttgtca
accgcaacatttacaaaggccatcttcacagtgacaggaaaagacattacagtgttttgt
gaccaatgggtacgacaaggaggacatgcgaagttcaatatgaagtttctcttcaaccgg
aaaagaaatattgttgagatgactattgaacaaggttatattggtgaattaggaatccgt
cgttatgttggccccttggtggtgtggattcaagagttggatggaacatttaagcacact
ttacagattgagcaccaggtatcaaagaaagaaattgtctgccattcaaagtcccgaaga
aacaagaagaagaaaatccctttatgcactggagaagaagtggacatggatctgagccat
ctggatgctgattcccctgttctctggcttcgcttggatccagacatgacgctaatgcgt
gctgtagaagtggaacaacctgacaatcagtggcagtaccaattgagacatgaacgagat
gtaacagctcagactgaagctatcaatgcccttctgcgattagcgaagcaaggagctgta
acaactgaaatgaggaatactctaaatgcagttttggaaaatgaacagtgcttttacaag
gtccgttgtagagcagcacactgcctgaccagagtagccaatgcaatggtagcaaactgg
aatggtcctcctgcaatgatgcagatcttccgcaagatgtttggatccttttcctgcccc
aatatcataaggcagcatgactttaccagcttgcagaactattacattctcaagacactg
ccagttgccatggctggtcttcgcaacacccacaagcaatgtcctccggaagttttaggg
tttttgatggacctcttcaagtatagtgataattccaagaaccgctactcagacaactac
taccgctctgcacttgttgatgctctggcagcagcagtttctccagcacttgtgcagcat
gacccagcaaccattacttcagacactctgactgaggatatgaagaggattttaagcgaa
attgttcgttacttgaacttagaaaaaatgctaccttgttataagtacactgtgacagtg
tcctgcctgcgtgctctgcgggtcctccagaagaatggtcatttacctcccaaatcagat
atcttcaaggcatatgctgcttatccacaatatatagatgtgcgccttgcagcaattgag
cagatagtagacttcttaatccgtgacgggacacgtgaagatatggactttttgctgacg
ctggctgagtcggaccccgttccaatggtccgatatcgtacccttgtactgctagctaag
aatcctcctttcatcatgggtcagagtcacaaattggacacccagcagctggtggatcgc
ctctggaatttcatgaattctggacagccatgtgactcaagagtacgttgtgcagtgctg
gatctgtactatgccatgtatggtcgtcgtaggccagcttgcattcctgcctcagaacct
gcactggtgctgaatctccgcaaaccaccaaatccacccatcattaatcctgttatagtg
aaagaagaagaggaacagaaggtattgcccttaaagcgggaggctcccccagatgatgtc
ttcccagagctcaagacagaaatcaagaacgaagtgaatgagatgcctgttgaggttatc
tttacagaagactctaaagttagaataaagcaggatgatgtggaagtgtttgatgaagaa
gttgattgcacagtgacacccagtatgccaacaagtattgacggtgacatatcagaatca
acaacatcactacctggagaatgccatactgttgctggggctcctacaggctttgactcg
gacatgttccgcacaggcagtgctgattctcatggaaaatcccacaaaagcaagaaaaag
aaaaaggataagaaacacaagaagcacaagaagcataaacatgagcataaagacaaagat
aagcttgacaaacttgacaagtttatccaagaggaaaacctgagttcaggttcatcaaac
ccaccgagcccagcctctccaaatatgccaagcagtatgacattctaa
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