Penaeus chinensis (fleshy prawn): 125041909
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Entry
125041909 CDS
T08118
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125041909
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125041909
04131 Membrane trafficking [BR:
pchn04131
]
125041909
03036 Chromosome and associated proteins [BR:
pchn03036
]
125041909
Enzymes [BR:
pchn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125041909
Protein phosphatases and associated proteins [BR:
pchn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125041909
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125041909
Membrane trafficking [BR:
pchn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125041909
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125041909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
125041909
NCBI-ProteinID:
XP_047493254
LinkDB
All DBs
Position
31:complement(22265476..22301776)
Genome browser
AA seq
2022 aa
AA seq
DB search
MTEDKENVLQPQRKNSGKGARARRRGSVPAGAGGAKEGEGETGKPRRLAGIRPRISIEEL
RNAYKRQASTPQEEILPMFDPMAKAQESKGVTRGRTGLVYDERMAEHRCLWDANYPECPE
RLTHTLERCRQLGLIERCEPILPRTATEDEILKSHSRSHLYLLWSTKDEKNKEKLENISS
HFDSIYIHPETYDLALLAAGSTVDLVDAIMAGKIQNGMALIRPPGHHAMKTEFCGYCFFN
NVALAAQVALEKHKLSRILIVDWDVHHGQGTQQMFYEDPRVLYFSIHRYENGTFWPELRE
SDYDNVGAGRGRGFNFNVPLNKTQMKNEDYLAVLHQVLLPVAYEFNPELVIVSAGYDAAV
GCPEFDPELVLVSSGYDAAVGDEKGEMEITPAFYAHLTSSLMALANGRVAVIFEGGYCLE
SLAEGAALTLSALLGDPCPKLLDPILKPSLSMCESLLNLIYVQRPYWKCFQYQGSFSVHE
KTNGDTGERHIPTLSYLGNATKPLQYETRNCYPVQSEEVKEKIRLQLARLKQDKPPQMFE
NNRLCLVYDEAMSNHHSLSEKEHPERPERTERIWKSLKQFGIIERATILQSRYATQQELE
LIHTQEHVNLMTSTSALSEKELLNMQDNYKSIYLHPKSNEAALLAAGSLLQVIDDVCNNK
SLSGIGVIRPPGHHAEQDHPHGFCLYNNVAIAAKYAITHHGCERVLILDWDVHHGNGVQH
AFVADPKVLYISIHRYDHGLFFPSSEDANYDQVGSGEGEGYTVNIPWNKSGMGDAEYMSA
MLQVVMPIAYQYDPQLVLVSAGFDAARGDPLGGCRVTPECYGHMTRLLSSLAGGRMVLAL
EGGYNLSSISYCMTMCAKALLGDPLPSLESGLVPNKNAVQSISDTIRTHKKYWTALSFQV
DLPVEDVLCQGFGGGAQPVESGASGSEVSSTNVSPVSTPSTASPPYVSAPSSPDKTWKNG
NCMENGASPQLECSSERTKFDSDKMNIDVTPIPELQRSVRSRVKSEKAASASVAEQRDVK
AGGMQKQFGSEGSSRMSRRKVGDQGGSGENANHTSTPIRPSRPVKNVGLMLRAAASCAGI
VKGATAIVSNENTCDACYKATTLDSGSINGILKQCKELKLLHACTIIEPRPASEEEILSV
HTRETLEGHVQKGTCSKSPCSGDPALSAAGSFVELISEVVQGNVLNGLALVQVSDHTSSG
NQKISNNYIDNLAVGTQYALDTIGLQRVLIVNWNAQNGYNTQNLFYSDPRVLMFSVNLTD
DQSATKGSVDRRGENKGLGYTFDLSLNRDSQSKNFTQGDYLTILHQVILPVAYEFCPELV
LLAIGNDLVHQSPAVSPLIYSHITQMLMPLAQGHLAVMLEVGNAKEITKDIATATLSALL
DKAVELLPVIYENTSEVQDSVVNMINVQAATWKSLKQHAQNSCINTKKQANASSTLLCDE
QQIIAKAFEGCATIPTHTLCLAYDEGMMEHFSYDDETHPERPERISCIFQRLQEFGIVGR
CHQVKTRLASAAELETVHSPKHIKFMSSLHSKKPKELQGMQNSFESIFFHRQSNNAALLA
SGSLLEVVNSVLRGESRRGLAVIRPPGHHAEKNVPCGFCIYNNVAVAAKHAIGAHGLSRV
LIVDWDVHHGNGIQHMFEDDPQVLYVSIHRYDNGMFFPGSPDANYNRAGTKKGKGYNVNI
PWNKGGMGDGDYMAAMAEVILPIAYQFNPELVLVSAGFDAAVGDPLGGCRVSPECYGHMT
KLLSCLAGGRVIIALEGGYNLNSISYCMTMCAKALLGDPLIPLSQGLAACPSACETLSNV
VSVHQKFWSALDLKSKGMSPSSRKSKKTTKQSPSVDLVHRSPETPDGKTGLDELTSTLSQ
MSLGKEGKGAKSMEVVDVKMEEEDGAVGGTCATSDEGLNTFLLTELSGAESMYAVVPLQW
CPHLESVNPVPNNSLDAFSPCEECKDLAENWVCLTCYKVMCGRFVNEHMLMHGVTQEHYM
VLSYADLSVWCYSCDSYIHHEILQEAKRAAHISKFGEDIPGS
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggacaaggaaaatgttctccaaccccaaaggaagaactcaggaaagggagcc
agggcccggcgccgtgggagtgtcccggcaggagccggcggagccaaagagggggagggg
gagacagggaaacctcgccgtttggcagggattagaccaagaatctccattgaagaactg
agaaatgcatacaaacggcaagcttccacacctcaggaggaaatattaccaatgttcgat
cccatggccaaggcccaggagagcaaaggagtcacccgtgggaggactggtctggtctat
gatgaacgcatggccgagcaccgatgcctgtgggatgccaactatcctgaatgtcctgag
agactgacacacaccctggaaagatgtcgtcagctgggattaatcgagcgttgtgaacct
atattgccaagaacagcgactgaagatgagatcctgaaaagtcattctcggtcacatctc
tacctcttgtggagtacgaaggatgagaagaacaaggaaaaactggaaaacatctcttcg
cactttgactcgatatatattcatccagaaacctatgatcttgcactcttggcagctggg
agcaccgtagatctagtagatgcaataatggctggaaagattcagaatggaatggctctt
attagacctccaggacatcatgcaatgaagacagagttttgtggatattgtttctttaac
aacgtggccctggcagctcaggtggccttggagaaacacaagctgtcacgtattctaatt
gtggattgggacgttcaccatggccagggtactcagcagatgttctatgaggatccaagg
gtcttatacttctccatccatcgctatgaaaatggcaccttctggccagagcttcgggaa
agtgactacgacaatgttggagctggccgaggtcggggtttcaacttcaatgtacctcta
aacaagactcagatgaaaaatgaggattatttagcagtgcttcatcaagttctccttcct
gtggcatatgagttcaatccagagttggtcatagtgtcagcaggatatgatgcagctgtt
ggatgtccagagtttgatcctgagttggttcttgtttcctctggttatgatgctgcagta
ggtgatgagaagggagaaatggagatcacccctgccttttatgctcacctcacctctagt
ctcatggcactggcaaatggacgtgtagctgttatctttgagggtggctactgtcttgag
tcgctagcagaaggagctgctctgacacttagtgcccttctgggagacccttgcccaaag
cttctggatcccattttgaaaccctcactaagcatgtgtgagtctctgctcaaccttatc
tatgtccagaggccatactggaaatgtttccagtaccaagggtccttctctgtccacgaa
aagactaatggggacacaggagagcgccacatccccaccctctcctacctcggcaatgca
acaaagccccttcagtacgaaaccaggaactgctatccagtccagtctgaggaggtcaag
gaaaagatcagactccagttggccaggctgaagcaagacaaacctcctcagatgtttgag
aataatagactctgcttggtgtatgacgaggccatgagtaatcaccatagtttatcagaa
aaagagcatccagaaagaccagaaagaacagagagaatatggaaatctctgaaacagttt
ggcatcatagaaagagcaactatcttgcagtcacgatatgctacacagcaagagctagag
ctcattcacacacaggagcatgtaaacctaatgacaagcacaagtgcgcttagtgaaaag
gagctgttgaatatgcaggataactacaagtcaatataccttcatcccaagagcaatgaa
gctgctcttctggccgctgggagcctcttgcaggttatagatgatgtttgtaataacaaa
agcttaagtggaataggagtaattcgtcctccaggccaccatgcagagcaggatcatcca
catggcttctgtttgtataacaatgtggccattgctgctaagtatgccattacccaccat
ggttgtgaaagagtgctgatccttgactgggatgttcaccatggtaatggtgtccagcat
gcattcgtggctgacccaaaggtcctctacatttccatccaccgctacgaccatggcctc
ttcttcccttcttctgaagatgccaattatgaccaggttggctccggagagggcgagggc
tacacagtcaatattccatggaataagagtggtatgggagacgcagagtacatgtcagca
atgttgcaggtggtaatgccgatagcataccagtatgacccacagttagtgcttgtgtca
gctgggttcgatgcagctcgtggtgaccctcttggaggttgccgtgtcacaccagaatgc
tatggccacatgaccaggctcttgtcaagcttagctgggggccgcatggtcctggcacta
gaaggtggctacaacctaagcagtattagttactgcatgactatgtgtgccaaggctctt
ctgggcgatcctctaccctcgcttgagtcaggacttgtgcccaacaagaatgctgtgcaa
tccatatctgatactattagaacccataaaaagtactggacagctctgtcctttcaggtt
gatcttcctgttgaggatgttctgtgccaaggatttggaggtggggcccaacctgtggag
tcaggtgcttctggttctgaagtctcttcaactaatgtgtctcctgtctccactccgtcc
actgcatcccctccttatgtctctgctccatcttctcctgataagacttggaagaatgga
aattgtatggagaatggagcatctccacaattggaatgcagctctgaaaggaccaagttt
gattcagataaaatgaacatagatgttacaccaatccctgaattgcagagatctgtgaga
agtagagtgaagagtgaaaaagctgcttcagcttccgttgcagaacaaagagatgtaaaa
gccggaggaatgcagaagcagtttggttcagagggaagttcaaggatgagccgaagaaaa
gttggggatcaaggtggctcaggggagaatgctaaccacacatcgacacccatccggcca
agtagaccagtaaaaaatgtaggccttatgctcagagctgctgcatcgtgtgccggaatt
gtgaaaggagcaacagctattgtctccaatgaaaatacctgtgatgcttgttataaagca
accacactagattctggaagcattaatgggatcctaaaacaatgcaaagaattgaaactt
ttgcatgcatgtacaataatagagccaagaccagcttctgaggaggaaattttgtcagtc
cacaccagagaaacactggaaggtcatgtgcagaaagggacatgtagcaaaagcccctgt
tcgggtgaccctgcattgtctgcagctgggagctttgtagagttgattagtgaagtggta
cagggaaatgtgctcaatggtttagctcttgtacaggtatctgatcataccagttcaggt
aatcagaaaattagcaataactatattgataatttagcagttggaactcaatatgcttta
gatactattgggctacaaagggtgcttattgttaactggaatgctcagaatggttataat
actcaaaatcttttttacagtgatccaagagtcttaatgttttctgtcaatctcactgat
gatcagagtgcaaccaaagggtcagttgacagacgaggagagaacaagggccttggttat
acttttgatttaagccttaacagagattctcagagtaagaatttcacccaaggagattat
ctcacaatactccaccaggtcatcttgcccgtggcctatgaattttgcccagagctggtt
ctcttagcaattggtaatgacttagtgcaccagtccccagcagtgtctccactcatttat
tcacatataactcaaatgttaatgcctttagcacaaggccatttagctgtgatgttagag
gttggaaatgccaaggaaataaccaaagatattgccactgccacattgtcagcactgcta
gacaaagcagtagaacttttgccagtaatttatgaaaacacatcagaagtacaagattca
gttgttaatatgataaatgtacaagcagcaacctggaagagtttaaaacaacatgctcag
aactcctgtattaatacaaagaaacaggcaaatgcatcttcaacattattgtgtgatgaa
cagcaaattattgctaaagcatttgaaggttgtgcaactatccccacacatacactttgc
cttgcctatgatgagggaatgatggaacacttcagttatgatgatgagactcaccctgaa
aggccagagagaattagttgcatcttccagcggctgcaagaatttggcattgttggccgc
tgccaccaagtaaagacaaggttagcatcagcagcagagttagaaactgtccacagccct
aagcacataaagtttatgtcaagtttacacagtaagaagccaaaagagttgcaaggaatg
cagaacagctttgaatccatcttcttccatcgtcagtctaataatgctgctcttttggct
tctggctctctcctggaagtagttaacagtgttctaagaggtgaaagtcgccgtggacta
gcagttatacggcctcctggtcaccatgctgagaagaatgtaccatgtggtttctgcata
tacaacaatgtagcagtggctgccaaacatgccattggagctcatggtttgagtcgagta
ttgatcgtggactgggatgtgcatcacggcaacgggatacagcacatgtttgaagatgac
ccacaggtcctctatgtttccatccaccgttatgataatggcatgttcttcccaggcagt
cctgatgccaactacaatagggcaggcaccaagaaaggaaaaggatataatgttaatatc
ccatggaataagggtggtatgggtgatggagactacatggcagccatggcagaagtaatc
ctaccaattgcataccagtttaaccctgagctggtattagtttctgccggttttgatgca
gccgttggagacccattaggaggctgcagagtttcccctgaatgctatggccatatgaca
aaactgttgtcatgccttgctggtggtcgagttattattgctctagaaggtggatacaac
ttgaactcgatcagttactgtatgaccatgtgtgcaaaggctcttttaggggatcctctc
atccctctcagtcagggccttgcagcatgtccaagtgcctgtgagactttgagcaatgtc
gtgtctgtacatcagaagttctggtcagcattagacttgaagagtaaaggaatgtcacct
agcagtcggaaatctaaaaagaccacaaaacaatctccatctgtcgatcttgttcataga
agtcctgagaccccagatgggaaaactggtcttgatgaattaacaagcaccctcagccaa
atgagtctgggcaaagaagggaaaggagccaaatctatggaagttgttgatgtgaagatg
gaagaggaggatggagctgtaggaggcacttgtgccacatcagacgaaggccttaacact
tttttactcacagaactttcaggagcagagtctatgtatgcagttgttcctttgcaatgg
tgtcctcacttggagtcagtgaaccctgtgccaaacaatagcttggatgccttcagtcca
tgtgaagagtgcaaagacttggcagaaaattgggtttgtctcacctgctacaaggttatg
tgtggacgatttgtaaatgagcatatgctgatgcatggtgtaacacaagaacattacatg
gtgctaagttatgctgacttgtctgtttggtgctattcatgtgactcctatatacatcat
gagatcttacaggaagcaaaacgggcagctcacattagcaaatttggagaggatatccca
ggctcatag
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integrated database retrieval system
