Penaeus chinensis (fleshy prawn): 125041989
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Entry
125041989 CDS
T08118
Name
(RefSeq) general transcription factor IIH subunit 1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03022
Basal transcription factors
pchn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125041989
09124 Replication and repair
03420 Nucleotide excision repair
125041989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125041989
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125041989
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125041989
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125041989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
125041989
NCBI-ProteinID:
XP_047493404
LinkDB
All DBs
Position
31:complement(33721474..33733801)
Genome browser
AA seq
547 aa
AA seq
DB search
MSGEREDILLQVNHVRYKKNNGQLYLSQTRVGWMMEESDTFTVSVMYNDIRTQKISPEGK
PKVQLQIVLHDISSHTFQFCNPEGRDKQVVERNLVKERLSQLMNQNKRQPPDELMQKKRM
LDENEQLQQLYRALVPTSIISVDEFWKEIASQYKQTMGPQQDVGVSGAFLADIKPQTDGN
NGKVQYNLTPEIMAAVFKTYPTVKKKHSDYVPHRMSESEFWTRFFQSHYYSVHTTSRSEN
VFSECAKSDDKEWNRDVNSIQNDPLYDLNDIYDGERVHSIEGDLKVAGVKAGSNIIHATM
IKRFNQHSLNILKAQNYSEKEKIMDEIVAKNPNGIPNGDANQEPDLHLHKSKKVRIEEKL
AYEDLENKSNAEITSLIIHQKDRYLTGPTEDTTTHGLPPRQVSALQDQLRIAVDNWNPNL
HLSQDSDSAYKALQSFSEKSRKSRSSGGIHGDHLPGNLHKELTQVYSSAGELLRHFWSCF
PPRTPQLQEKLHKMHETLCRYHAVTIRPFHEMAVNDYNCNSTILDHLIGMFNIANTKFEN
WKARNTR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagagagagaggacatcctgctccaggtgaatcatgtgcgttacaagaagaac
aacggacagctctacctgtcccaaacacgtgtgggatggatgatggaggagtctgacacg
ttcactgtcagcgtaatgtacaatgacatcagaacgcaaaaaatatctccggaggggaag
ccaaaagtccagctgcaaattgtcctccatgacatttcgtcccacacattccagttttgc
aatccagaggggcgggataagcaagtcgtcgagagaaacctagttaaggagcgtcttagt
cagcttatgaaccagaataaacgacagccccctgatgaattgatgcagaagaaacgcatg
ttggatgagaacgaacaactccagcagctttacagagcacttgtccctacatctatcata
tcagtggatgagttttggaaggagattgcaagccagtacaaacaaactatgggaccacag
caagacgtcggagtgtccggagcatttttggctgacataaaacctcaaaccgatgggaat
aatggaaaagtccaatacaatttaaccccagagatcatggctgctgtgttcaagacatat
ccaacggtcaaaaagaaacattctgattatgtccctcacagaatgtctgaatctgagttt
tggacccgattcttccagtcccactattacagtgttcacaccactagtcgcagtgaaaat
gtgttttctgaatgtgcaaaatctgacgataaagaatggaacagagatgtgaactccata
caaaatgacccactgtatgatttgaatgacatttacgatggagagagagtccactctatt
gaaggcgatctgaaagttgctggagttaaagcagggagcaatataattcatgctaccatg
atcaaaagatttaaccagcacagtctcaacattcttaaagcacaaaattattccgaaaaa
gagaaaataatggacgagatagtggcaaaaaatcctaatggtatcccaaatggtgatgca
aatcaggaaccagatcttcatttacacaagagtaaaaaggttagaatagaagagaaatta
gcatatgaagacttggaaaataaaagcaacgcggagattacctcgctcatcattcaccag
aaagaccgatacctcacagggcccactgaggacacgacaacacatggtttaccacctcgg
caggtatcagctctgcaggatcagttaagaatagcggttgataactggaacccaaacttg
cacctgagccaagattccgattcagcatacaaggctctgcagtccttcagcgagaagagt
cggaagagtcgaagcagcggaggcattcacggggatcacttaccgggaaatttacacaag
gagctcactcaagtgtatagcagtgctggggaactgttgcgtcacttctggtcgtgcttc
cccccaagaacgccccaactgcaagaaaaactacacaaaatgcatgaaactctttgccga
taccatgctgtcaccataagaccattccatgaaatggcagtaaatgattataactgcaac
tcaaccatcttggaccacctgataggcatgttcaacattgccaatacaaagtttgaaaat
tggaaggctcggaacaccaggtga
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