Penaeus chinensis (fleshy prawn): 125042221
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Entry
125042221 CDS
T08118
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125042221
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pchn03310
]
125042221
Transcription factors [BR:
pchn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125042221
Nuclear receptors [BR:
pchn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125042221
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DSHCT
TFIIA
Motif
Other DBs
NCBI-GeneID:
125042221
NCBI-ProteinID:
XP_047493684
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Position
3:42336646..42470254
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AA seq
665 aa
AA seq
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MDILSEIFGPGWEREVTGDAVDTTTPSSSTPTPTNRPPSATDKKSNSIKGKAQIEIIPCK
VCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCVVDRVNRNRCQYCRLQKCL
NLGMSRDAVKFGRMSKKQREKVEDEVRYHRAQMRAVPGQETSPDSSMYEPPTPTSSDIYP
PTYHYSPDLTSFTPTGYNYTPQTTTSTIPFEITPDYVVDSTTFGDVRQTSLDPLPDSGAM
SPVVSSGKGGYVHRGAGTGGGGGGGGGGGGGSEQTGGGQMRGAGPGGGGGGGGGEGGGGG
GGGGGSLIGGADILIKEEVETCFNMDTLQTTTRLGEGGGASSMSDKNFTPVDSTTYLPPG
PTSPPLSQPQQQQQPHQQLQQQQQQHLQQQQQQQQPTVVGATVLPEEESVSPHPEQLAEI
IARWVADAHLRTCLYSTEHILDVMRKQSPDITNINYYKNMAHEELWYDCAQKLTSVIQQI
IEFAKAVPGFRKFSQDDQIVLLKAGSFELAVLRMTRYYDVNQNCVVYGDTLLPMEAFLTT
ETVEMKLVNNVFEFAKTIAELKLTDTELGLYSALVLLQADRPGLRGTDEISKLNEAVGRS
LCLELEKTHRYPVKGDITVYAFLLAKMPALRELSMLHQEALSKFKRNAPHLQFSDLHKEI
FNVDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacatattaagcgaaatctttgggccggggtgggaacgggaggtgaccggagatgcc
gtggacaccaccacgccctcctcctccacgcccacgcccacaaaccgcccgccctccgcg
actgataagaagtcaaactccatcaaaggtaaagcccagattgagatcattccctgcaag
gtgtgcggcgacaagtcctccggcgtccactatggtgtcatcacgtgcgagggctgcaag
ggcttcttcagaaggtcccagtcctccgtcgtcaactaccagtgcccgcgccagaagaac
tgcgtggtggaccgggtcaaccggaaccggtgccagtactgccgcctgcagaagtgcctc
aacctcggcatgtccagggatgctgtgaagtttgggcgcatgagcaagaagcaacgcgag
aaagttgaagacgaagtccgctaccaccgggcgcagatgagggcagtgccaggacaagag
acctcgccagactcttccatgtacgagccgcccacgcctacatcctcagatatttacccg
cccacgtaccactacagcccagaccttacgtcctttacgcctacagggtacaactatacg
cctcagactaccacttctacaataccttttgagatcaccccagattatgtggttgattct
accacttttggtgatgttcgccagacctccctagatccactaccggactcaggggcaatg
tcaccagttgtgtcctctggtaaaggcgggtacgttcacagaggagctggcacaggaggt
ggaggaggaggaggtggtggaggtggaggaggaagcgagcaaacaggtggtggtcagatg
cgcggtgcagggcccggaggaggaggcggaggaggaggaggggaaggaggaggaggtgga
gggggaggtggtggaagcctcattggtggagcagacatacttataaaagaagaagtagag
acgtgctttaacatggacaccttgcagaccaccaccagattgggtgaaggtggtggtgct
tccagtatgtccgacaagaactttactcccgtagacagtacgacgtacctgcctcccgga
cccacctctccacccctcagtcaacctcagcagcagcaacagccacatcagcagctacag
caacaacagcaacagcatctacaacagcaacaacaacaacagcagccaactgtagtcggt
gcaacagtgttaccagaagaagaaagcgtgtctccccatccggagcagttagccgagatc
atcgctcgctgggtcgccgacgcgcacctgcggacgtgcctctactccaccgagcacatc
ttagatgtcatgaggaaacagtcgccagacatcactaatatcaactactacaaaaatatg
gcacatgaagaactttggtatgactgtgctcagaaattgacatcagtcattcagcagatc
attgaatttgctaaagctgttccaggatttagaaagttttctcaagatgatcaaattgtt
cttctcaaagcagggagtttcgagctggcagtgcttcggatgacgcggtactacgatgta
aatcagaactgcgtggtctatggtgacacactactgcctatggaggctttcctcacaaca
gagacagtggaaatgaaacttgttaacaacgtctttgaatttgccaaaactatcgctgaa
cttaagttgacagacacagagttaggcttgtactctgctcttgtgctcctacaagcagat
cggcccggattgcgcgggacggacgagatttccaagctgaacgaggccgtcgggcggtcg
ctctgtctggaactcgagaagacacaccgatacccagtcaagggggacatcacggtctat
gccttcttgctggctaagatgccagccctcagggagctgagcatgctacaccaggaagca
ctgagcaagttcaagaggaatgcaccacaccttcagttctcagatctccacaaggagatc
ttcaatgtagattcctga
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