Penaeus chinensis (fleshy prawn): 125042535
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Entry
125042535 CDS
T08118
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125042535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125042535
03041 Spliceosome [BR:
pchn03041
]
125042535
03036 Chromosome and associated proteins [BR:
pchn03036
]
125042535
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125042535
Spliceosome [BR:
pchn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
125042535
Complex B
125042535
Complex C
U2 SnRNP specific factors
125042535
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
125042535
TFTC complex
125042535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
125042535
NCBI-ProteinID:
XP_047494166
LinkDB
All DBs
Position
32:complement(16750061..16795109)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
VIRSLMAFRLTGGNKDYVVVGSDSGRITILEYSQAKNQFERIHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHMVGVDVGFENP
LFACLEIDYEEADTDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT
PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRTEDLYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQIYPDGIRHIRADRRVNEWKAPG
KKTIVRCAVNQRQVVIALTGGEIVYFEMDPTGQLNEYTERKEMKSDVICMGLGRVPAGEQ
RSRFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSVIEMGGQEGSESESRTLGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGSEAVLAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE
YTPRKFVIHQESGHLVVIETDHNAYTDDTKRQRKLQMAEELKEAAGEEEAEVAERMAEAL
LSEDLPDAVFGAPKAGPGMWASLIRIIEPIQGNTLFTMRLDQNEAAFSIALVKFANQNDM
DQQFLLVGTVKDYQLSPRQVDCGYIYTYRIVGDCTSLELVHRTEVEDIPTALCPYNGRVL
VGVGRLLRIYDLGKKKLLRKCENKHVPNLIVDIKARGQRVFVSDVQESLFVLRYKRHENQ
LIIFVDDTNQRWVTTSCLLDYDTAAVADKFGNIAVIRLGGDTNDDVDEDPTGNKALWDRG
LLNGASQKTEVIANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDPGKQRSISEDLDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacctgactctacaacgtgcatcaggcatcacccatgccgtgcatggt
aatttttctgggacacgcacacaggaactagtggtgtctcgaggaagatcattggaactt
ttaagacctgatccaaatactgggaaggtgcacaccattttgacaacagacatatttggc
gttattcgttcattgatggcattcagattgactggtggaaataaagattatgttgtggtg
ggatctgactctggcagaatcaccattctagaatatagtcaggctaaaaaccagtttgag
cgcatccacatggagacatttggtaaaagtggttgccgacgcattgtacctggccagtat
cttgccattgatccaaagggcagggcagtaatgattggtgctgttgaaaagcagaaattg
gtgtacattctcaaccgtgatgcagcagcaaggctgacaatttcctctccattggaagca
cacaaaagcaacacacttgtatatcacatggtgggagtggatgttggttttgaaaatcca
ctctttgcctgtctggagattgattatgaggaagcagacactgaccctacaggagaggcc
gtacacagaactcagcaaactctaacattttatgaactggatctaggactcaaccatgtt
gttaggaagtaccatgagccccttgaagaacatgcaaacttcctcatatcagtaccaggt
ggtaatgatggaccttctggtgtcttagtttgttcagaaaactacttaacctacaagaat
ctgggagatcaacctgacatcagatgtcctattcccaggagaagaaatgatcttgatgat
ccagagcgaggaatgatcttcatttgcgcagccactcataagactcgctcgatgttcttc
ttcttggctcagacagagcaaggagacatcttcaagataacattggaaacagatgaagat
gttgtgacagagatcaagttgaagtactttgacacagtaccacctgcaacggcaatgtgc
gtcctcaagactgggtttctctttgttgcctcagaatttggaaatcattatctgtaccag
attgctcatttgggtgatgatgatgatgaaccagagttcagttcagctatgccacttgaa
gaaggagatacattcttctatgcaccacgacagttgcaaaatcttgtgctcgttgatgaa
cttgactcactttctcctattatggcttgtcagattgctgatttagcaaatgaagatacg
ccacagctgtatactgtgtgtggcaggggcccaaggtcatctcttcgtgtacttcgtcat
ggtctggaagtgagtgaaatggctgtgtcagagttgcctggtaaccccacagctgtatgg
actgtcaggaagcgaactgaagatctttatgattcatacatcattgtatctttcgtaaat
gccactcttgtgctgagcattggtgagactgtagaggaagtgacagattcaggtttcctt
ggtacaactcctacattggcttgttcccagcttggagatgatgcacttgtacagatttat
ccagatggcatccgtcacatcagagctgaccgtcgtgtgaatgagtggaaagcccctgga
aagaagactattgtgcgatgtgctgtcaaccagagacaagtagtgattgctctcactggg
ggagaaattgtttactttgaaatggatccaacaggccagctgaatgaatacacagagagg
aaggagatgaagagtgatgtcatctgcatgggccttgggcgtgtgcctgctggggagcaa
cgatccaggttcttggctgtggggctctcagacaatactgtcagaatcatatccttggat
cccaatgattgcctaacagtgcgaggcatgcaagctttgccagctttaccagaatctctc
agtgtcatcgagatgggtggacaggaagggtcagagagtgaatctcgtactttgggtgca
ctttatctgaacattggtttacagaatggtgtgctgttaagaactgtattagattcagtc
actggtgatatgtctgatacacgtacacgatacttgggttccagacctgtcaagcttttc
aggattattatgcaaggaagtgaagctgttcttgcaatgtcttctcgttcctggctgtcc
tattattatcagaatagatttcatttgacaccactatcatatgaaagtctggagtatgct
gcagggttctcctcagagcagtgccctgaaggtattgtagctatttccaccaacacacta
cggattttggctctggaaaaacttggagctgtgtttaaccaggtatcccatccacttgag
tacactccacgcaagtttgtcatccatcaagagagtggtcatttagtggttattgagact
gatcataatgcttacacagatgataccaaaagacagcgaaagcttcagatggcagaggaa
ttgaaagaagcagctggggaagaagaagcagaagtggctgaacgcatggcagaagcactt
ctttcagaggacttgccagatgcagtatttggtgcaccaaaagctggaccagggatgtgg
gcatctctcattcggattatagagcctatccaaggaaacaccctttttacaatgagattg
gatcagaatgaagcagctttcagtattgccctggtaaagtttgcaaatcagaatgatatg
gatcagcagttcctgctggttggaacagtgaaggactaccagttaagcccacgtcaagtt
gactgtggatatatctacacttacagaattgttggtgattgtactagtctagagctagtt
catcgaacagaagttgaagacattccaacagctttatgcccatacaatggcagagtatta
gtaggagttggaagattgcttagaatatatgacttggggaagaagaaactgcttagaaag
tgtgaaaataagcatgttccaaacctaattgtggatatcaaagcacgaggacagcgagtt
tttgtgagtgatgttcaggaaagcttgtttgtgcttagatacaaaagacatgaaaatcag
ctaatcatatttgtggatgacacaaaccagcgatgggtgaccacatcttgcctccttgat
tatgatacagcagctgtagcagacaagtttggcaacattgcagtgataaggttaggtgga
gataccaatgatgatgttgatgaagatcccacaggaaacaaggcactctgggaccgtggt
ctgctgaacggtgcttcacaaaaaacagaagttattgccaacttccatgtcggagaaact
gttaatacactggagaaagccacattaattcctggaggcagcgagtctcttgtatacact
accctgagtggcactgttggagttctggtaccatttacatcaagagaagaccatgagctt
ttccaaaacttggagatgcacatgcggtcagagcatccaccactctgtggaagagaccac
ctctccttcaggtcttactttttccctgtaaagaatgttattgatggagatttgtgtgag
cagtttaacatggtagatccaggaaaacagcgcagtatttctgaagacttggataagact
cctaatgaactttcaaagagattagaagacattagaactcgctatgccttctaa
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integrated database retrieval system
