Penaeus chinensis (fleshy prawn): 125042672
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Entry
125042672 CDS
T08118
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125042672
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125042672
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
90S particles
Helicases
125042672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
HA2_C
DEAD
Helicase_C
AAA_19
ResIII
ATPase
AAA_30
AAA_22
HA2_N
Flavi_DEAD
nSTAND3
FtsK_SpoIIIE
AAA_25
AAA_14
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125042672
NCBI-ProteinID:
XP_047494432
LinkDB
All DBs
Position
32:complement(13578949..13596773)
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AA seq
1204 aa
AA seq
DB search
MGRARQKYRERPTVVADESNQKKIKVELKNAEAETYDTANALVLPSKKRATKKLRDKNAA
PVKLLSKKKRKLLEKIVDQKKKKARRSELIEALEKVQASPKDLALLTQLQSTQTLGRKKY
LSEDFTLITKQEVEEEGGRVISVIKGRKRKKAMEDDGEKEKKRRDPTVVRLGEVSSSEES
EDDEEDEEGEEEEENVEDQGTENGDGSKEENDEVEEEGIVEEVKKEEEATDKDTTEGPKA
TEQKEEPKEVKMKAQVVPAKPAVFVMLDRLPEVQASRLKLPILSEEQVIMEAINENPVTV
IVGATGSGKTTQVPQFLYEAGYTSDGKMIGVTEPRRVAAIAMSQRVGHEMNLSSDQVSYQ
IRFEGNSTPETKIKFMTDGVLLKEIQKDPTLKKYSVIIIDEAHERSVFSDILIGILSRII
PRRQAKGKPLKLVIMSATLRVEDFTDNVRLFKEPKPPIMKVDARMFDVAIHYNKRTNEDY
VGEAYKKACKIHRQLPDGGILIFLTGQQEVNTVVRKLRSTFPTHSGNNGEIKKSAYQRKK
EDLKAKKEKRKSGQLQKIVLPKVKLEDFVSAFPDDAEGEVDELEDRGADDRDDSDLDLDE
DDEGEEEGKGGEPEQPMWVVPLYSMLPPEKQQMVFQPPPEGMRMCVVATNVAETSLTIPN
IKYVIDSGKVKEKVYDKVTGVSMFHVTWIAQASANQRAGRAGRTAPGHCYRLYSSAVFND
EFQKFATPEIQRRPIDDLVLVMKSMNLPVINFPFPTPPDQLQVCTGIKRLITLGGLDESE
LVSKKVPTSVPRRKRKTLNMVEHKDLSYITPLGRAMAAFPLAPRYGKMLALSHQHNLLPY
TVAIVAALTVQEVLIETPLDSKANVNETRKRWQNLRLSWASAGNSRSLGDAMVLLRAVGA
AEYQGGDREWCEKNGLRHKGIIEIRKLRRQLTNEINMIIPSCNIVLDPHMAPPTDDEARL
LRQIVLAGAVDHVARRVDDHELKTPEDRQKWRYAYRTQEMEEPVFLPSASVTRIDMPKWV
VYQDIYETHKMFMRTVTVIEPEWLATFAPRLCDFSPPLETPEPRYDAERDKIMCHRTATF
GPSAWEIPEVEVEYPYGREMFPWIAFYFLTGDICPALKPFKEYLFEPRTLVNPVAIRYRE
QRDNILRALMSQKVTSYAKLESLWKIQPKFLQNEYLQWFQDSELHAEVIKIWPPFIKKEV
NEWD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgggtagggcaaggcagaagtacagagagcgtcctactgtggtagcagatgaatcaaat
cagaagaagattaaggttgaattgaaaaatgctgaagcagaaacgtatgatacagcgaac
gccttggttctgccatcaaagaaacgagcaacaaagaaactgcgtgataaaaatgctgcc
ccagtcaaactactctcaaagaagaagaggaaacttttggaaaaaattgttgaccaaaag
aagaaaaaagccaggagaagtgaactgatagaagcactggagaaggtccaggccagcccc
aaggacctggctctcctgactcagctccagtcaacacagacgcttggaaggaagaagtac
ctgtcagaagacttcacgctcatcaccaaacaggaggtcgaagaggaaggggggagagtt
atcagtgtcatcaagggcaggaagcgcaagaaagcaatggaggatgatggggagaaggag
aagaagcgcagggaccctacagtggtcaggcttggggaagtgtcaagcagtgaggagagt
gaagatgatgaagaagatgaagaaggagaggaggaagaagaaaatgtagaagatcaggga
acagagaatggtgatggaagcaaagaagagaatgatgaagttgaagaagaaggaattgtt
gaagaagtgaagaaagaagaggaagcaacagacaaagacacaactgaaggtcccaaagcc
acagaacagaaagaagaacccaaagaagtgaagatgaaagcccaggtagtgccagcaaag
cctgcagtctttgtcatgctcgaccgattgccggaggtgcaggctagccgtctcaaactg
ccaattttgtctgaggagcaggtcatcatggaggctattaatgaaaatcctgtcactgtc
attgtgggtgcaacaggcagtggaaagacaacgcaggtgccgcaatttctttatgaggca
ggatataccagtgatggtaaaatgattggagtgacagagcctcggcgagtggctgcaatt
gccatgtcacagcgtgttggccatgaaatgaacctctcttcagaccaagtctcataccag
atcaggtttgagggcaactccactccagagacaaagattaaattcatgactgatggagtg
ttgctcaaagagatacagaaggacccaaccctgaagaagtactctgtcatcataatcgat
gaagcccatgagcgcagtgtgttttctgacatcctgattggtatcctctcacgtatcata
cctagacggcaagccaagggaaaacctctgaaactagtcatcatgtcagccactcttaga
gttgaggatttcactgacaatgttcggctctttaaggagcccaaaccccctatcatgaag
gttgatgcaagaatgtttgatgtggcaattcactacaacaagcggacaaatgaagactac
gtaggagaggcgtataagaaagcatgtaaaattcatcgtcaacttcctgatggaggaatt
ctcatcttcttaacaggtcagcaggaagtgaatactgtagtgcgtaaacttcgctcaacc
ttccccactcactctggcaacaacggtgaaatcaaaaagagcgcatatcagcggaagaag
gaagacctaaaggccaagaaggaaaaacgaaaatctggccaacttcagaaaattgtgttg
cccaaagtaaagctggaggactttgtatcagccttccctgatgatgcagaaggcgaagta
gatgaattagaggacagaggagcagatgaccgagatgacagtgacttagacttggacgaa
gatgatgaaggggaagaggaagggaagggaggtgaacccgaacagcccatgtgggttgtg
cccctgtactctatgctgcccccagagaagcagcagatggtgttccaacctccaccagag
ggtatgcggatgtgtgtggtcgctaccaatgttgctgaaacatctctgacaatccctaac
atcaaatatgttattgactctggaaaagtgaaggaaaaggtctacgataaagttacagga
gtctccatgttccatgtaacttggattgcccaagcctcagccaatcagagggctggccga
gctggccgaactgctccaggacactgctatagactatactcatcggctgtgttcaatgat
gagtttcagaagtttgcaacgccagagatccagcgacgtcccatagatgaccttgttctg
gtcatgaagtccatgaatctacctgtcattaacttcccatttccaacaccaccagaccag
ctgcaggtttgtactggcattaagcgtctcattaccctgggaggtttggatgagagcgag
ttggtgtcaaagaaagtacctacttcagttcctcgcagaaaaagaaaaactttaaatatg
gtggagcataaagaccttagttacatcacccccttaggcagggcaatggcagcattcccc
cttgctccaagatacggtaaaatgcttgccctcagtcaccagcacaacctcctcccatac
acagttgctatcgtggcagctctaacagtgcaggaagtcttaattgaaacaccattggac
tcaaaggctaatgtgaatgaaactcggaagaggtggcagaatctgaggctctcctgggct
agtgctggaaactcccggagccttggagatgctatggttctcctgcgggcagtgggtgct
gctgagtaccagggtggtgatagggaatggtgtgagaaaaatggattgagacacaagggc
atcattgagattaggaagttgcgacggcagttgactaatgagatcaacatgatcatcccc
tcatgcaacattgtactggacccacacatggcaccccccactgatgacgaggcaagacta
ctgaggcagatcgtgctggctggtgctgtggaccatgtggctcggcgtgtggatgaccac
gagctcaagactcctgaagatagacagaaatggagatatgcatatagaacacaagagatg
gaagagcctgtgttccttccctcagcatctgtcacacgcattgacatgcctaagtgggtt
gtctatcaggacatttatgagacacacaaaatgtttatgaggactgtaacggtaatagaa
cccgaatggttggcaacttttgcccccagactctgcgatttctcccctcctctggaaacg
cccgagccaagatatgatgcagagagagataagattatgtgtcacagaacagcaactttt
ggcccttcggcttgggaaatcccggaggtcgaggtcgagtacccctatggtcgagagatg
ttcccctggatagcattctacttcctcacaggtgatatatgcccagcactgaaacccttc
aaggaatacctcttcgagccaagaaccctagtcaatccagttgctataagatatcgtgaa
cagagagataacatcttgcgtgcgttaatgagtcaaaaggtcaccagctatgcaaagttg
gaaagcctgtggaaaatacaaccaaaattcctccagaacgaatacctgcagtggttccag
gacagtgaactacacgcagaagttatcaaaatctggcctccatttattaagaaggaggtc
aatgaatgggactga
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integrated database retrieval system
