KEGG   Penaeus chinensis (fleshy prawn): 125042700
Entry
125042700         CDS       T08118                                 
Name
(RefSeq) DNA repair endonuclease XPF-like
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03420  Nucleotide excision repair
pchn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    125042700
   03460 Fanconi anemia pathway
    125042700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pchn03032]
    125042700
   03400 DNA repair and recombination proteins [BR:pchn03400]
    125042700
DNA replication proteins [BR:pchn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    125042700
DNA repair and recombination proteins [BR:pchn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125042700
SSDB
Motif
Pfam: ERCC4 SAM_KSR1
Other DBs
NCBI-GeneID: 125042700
NCBI-ProteinID: XP_047494472
LinkDB
Position
32:complement(30874888..30885418)
AA seq 886 aa
MLEYENQMLLDLLHEDGLLVAAKGLGLERILISLIITYNDPGNLVLVIGTTSREEEYLLS
QLEGQGVTPIPRCVTAECSVNERSQIYANGGVLFVTSRILVMDILMERAPVDLITGVIVW
KAHKILESCQEAFILRLFRMKNKTGFVKGLSSSPLSFTAGFCHVERVMRNLFVKKLYLWP
RFHMDVNACLEKCKPEVIELHLKMTTPVQQIQMAVLELITETVQELRRSNSTIDTEEFTP
ENAISKSFEKILKVQLEPIWHQLSSRTKMLIADLKVMRTVLLYLTQYDCVTFYNLVNSLR
TTETAIQSSGWMFLGAAETLFVNSKLRVFGIAASPTKKSVREDNAKKLKKEYIDQNLEVN
PKWLALSEVLAEVREEVQEGKNLEKCLVVTHDDRTSQQLKEYLIDGAQVVLRRIFYRTIG
AKMGLQPPPNLFRDKDKNMQKDKGKKGKKTKTTEEAKEEVTLTQITKKYDFIGQDKSEFS
NEAETSEEVEEIRRRFLSPLIMVQSLRDNSDPFMMTRLLEEVQPKYIIMYDSDLTFIRQI
EVWQANHIERIRVYFLLYKGTTEEQVYLTNIKREKDAFEYLINEKATMVIPEYNDGKSGD
HPDLSRDPRKANEIDTSGNSNTRKGGQGEELKVPQRIIVDMREFRSELPALIHKRGIDID
PVTIEVGDYILTPDVCVERKSLSDLIGSLNSGRLYNQAQAMTRYYKKPILLIEFDQNKSF
HLQGRFFLSSDASSSAKDIAAKLQLLTLHFPHLRLLWCPSPYATAEIFQLLKEGKEEPVV
AQAQAITAETNPEVDSDKFNPQIKDFISKLPGITTKNIYSVLNKVSDLSELLSLSKEELT
EILGNSRNAQALYSGLHHCMKPPEKEELKKGSKFTKKGLKRFRTKM
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgttagaatatgagaaccaaatgctgttagacctcctacatgaggatggcctccttgtt
gcagcaaaaggattgggcttagaacggattttgataagtctgatcatcacatataatgat
cctggtaacctagtactagtaattggcactacgtcaagggaagaggaatatcttctatcc
cagctagagggccaaggagttactccaatccccagatgtgtcacggcagaatgttcagtt
aatgaaagatcccagatatatgcaaatggtggagtgctgtttgtcacatctcgcatttta
gtcatggatattttgatggaacgagcacctgttgatttgataacaggtgtgattgtttgg
aaagctcataagattttagaatcatgtcaagaggcttttatcctgaggttattccgtatg
aaaaacaaaactggctttgtgaagggccttagtagcagccctttgtcattcactgcggga
ttctgccacgtggagcgtgtcatgcggaatctctttgtcaaaaagttatacctgtggcca
aggtttcatatggatgttaatgcttgtttggagaagtgtaaacctgaggtaattgagctg
cacctgaagatgactaccccagttcagcaaatccagatggctgtgttagaactgattact
gaaactgttcaggaactccgtcgctccaacagtaccatcgacactgaggaattcacccca
gaaaatgcaatatccaagtcctttgaaaagattctaaaggttcagctggaacccatatgg
caccagttatcatctcgtacaaaaatgttaattgccgatctgaaggtcatgagaactgtc
ctactgtacttgacccagtatgattgtgtgaccttctacaatctcgtaaactcattgcgg
acaactgagacagccatccagagctctggctggatgtttttaggggcagcagagacactt
ttcgttaattcaaaactgcgagtgtttggcattgctgcaagcccaacaaagaaatctgtt
agggaagataatgctaagaaactgaagaaggaatatatagaccaaaatttagaagttaac
ccaaagtggttggcattgtcagaggttttggctgaagttcgagaagaagtgcaagaggga
aagaacttggagaagtgtcttgttgtgactcatgatgatcgaacgtcacaacagctaaaa
gagtatttgatagatggagcccaagtggtccttcgtcgcattttctaccgaacaattggt
gcaaagatgggtttacagcccccacccaacctgtttagagacaaggataaaaatatgcaa
aaggacaaagggaaaaagggcaagaagacaaagacaactgaagaggcaaaggaggaagtg
acactgactcaaatcacaaagaaatatgactttattggtcaggataaatctgaatttagc
aatgaggcagaaaccagtgaagaagtggaggagatacgaaggagatttctctctccactc
atcatggtacagtctttacgggataatagtgacccattcatgatgacacggctgctagag
gaagttcaaccaaagtacattataatgtacgattcagacttaacattcatccgccagatt
gaggtatggcaagctaatcatatagagcggataagagtgtattttttgttatacaagggg
accactgaagaacaagtatatctcactaatataaaaagagagaaggatgcatttgagtac
ctgattaatgaaaaagctacaatggtcatcccagagtacaatgatggtaagagtggcgac
catccagacttgagccgtgatcctcgcaaggccaatgagattgatacttcaggaaacagt
aacacacggaaaggaggacaaggggaggagctgaaagtgccacagagaataattgttgac
atgcgagagtttcgaagtgaacttcctgctctaatccacaagaggggcattgatattgat
ccagttacaatagaggttggtgattacatcctgactccagatgtgtgtgtggagcgcaaa
agtctgagcgacttgattggatcattgaattcgggccgactttataatcaggcgcaggca
atgaccagatattacaagaaacccatcttgcttattgaatttgatcaaaataaatcattt
catctgcagggtcgcttctttctgtcaagtgatgcatcttcatcagccaaggacattgct
gcaaaactacagttgctgactctgcacttccctcatcttcggttactttggtgtccttca
ccatatgctactgccgagatatttcagttgctgaaggaagggaaggaagaacccgttgta
gcacaagctcaagccatcactgctgagacgaacccagaagtagattctgacaagtttaat
cctcagataaaagatttcatatcaaaactacctggaataactacaaagaacatctattct
gtgttgaacaaagtctcagatctctcagagctactgtcgctctcaaaggaagaactaaca
gagatccttggcaacagtcgcaatgcccaagctctttactctggccttcaccactgcatg
aagccgccagagaaggaggaattgaagaagggcagcaaattcacgaagaagggtctcaaa
aggttcagaacaaaaatgtga

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