Penaeus chinensis (fleshy prawn): 125042739
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Entry
125042739 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04145
Phagosome
pchn04512
ECM-receptor interaction
pchn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125042739
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125042739
09142 Cell motility
04820 Cytoskeleton in muscle cells
125042739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125042739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchn04147
]
125042739
00536 Glycosaminoglycan binding proteins [BR:
pchn00536
]
125042739
Membrane trafficking [BR:
pchn04131
]
Endocytosis
Phagocytosis
Opsonins
125042739
Exosome [BR:
pchn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125042739
Exosomal proteins of colorectal cancer cells
125042739
Exosomal proteins of bladder cancer cells
125042739
Glycosaminoglycan binding proteins [BR:
pchn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125042739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
CBM_14
Motif
Other DBs
NCBI-GeneID:
125042739
NCBI-ProteinID:
XP_047494551
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All DBs
Position
32:5861961..5868983
Genome browser
AA seq
937 aa
AA seq
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MFIKAKTPRPVARRCTNMAFLSAILPMVMGLTIVVATDGSECPGEGRFPDPNACGGFMDC
IAKKTGFSVTRDHCNGFVYNATSMDCSTTPCGSRRERSVTNDFHPLSHLCESQPNRFLCA
NCKTLVHCVKGQALVRQCTENFYCTDKVGFGGAVCYPDEPDACLCLKPNEFRVDPYDPQR
FFSCENVGSQPESYKCPEGKEFDEGSAQCVNQVGFPECVKSGTFANPQNCGEYYSCIPLR
HGWVQKFYMCSGNHLFNERTKSCEDPCTLKFVCQQEGRFPDPLNMQHYFECFMEFGQMVQ
LRYQCPHGYMWSEESFGXGKCVEATEEYADYPFAHCDIPDDHCPDTDPCLQNPCFTGVAC
TFTSIAPFYTCGPCPAGYVGDGETCYALQCAVGFAGIGGDCAPDSDLDGYPDTELGCSSK
YCRRDNCINRPNSGQEDADGDGLGDACDLDADGDGFNSNSDNCPLIANPQQQDTDSDGQG
DVCDNCPAVPNPSQRDVDGDQVGDACDDDLDNDGSLNAADNCPSLANSNQVDADGDGIGD
VCDNCPLHPNPGQEDGDQDLLGDACDSNADSDGDGVDNDVDNCPSVANSNQLDVDGDGSG
DACDADSDNDGVDDTIDNCVMIPNPGQMDSNGDGLGDACITDFDGDKIDDLDDNCIKNPN
VHATDFRQLQMVALEPQSASAPPVWVIYDDGAEIHQIVNSDPALAVGDHVMIDVDFDGTF
FIEDTSDDDFVGFVFGYQSNARFYVVAWKKSPQNWFANAERGVTLKVVDSATGPGPALRD
ALWLTGSTPNQATLLWHDGSIGWTPNVAYRWQLHHRPTIGTIRFYLYQGTNLVMDSGNIY
DDTLQGGRLGLYCFSQEEIIWSNVKYTCEDGVPQAMFDDLPQILKDQVMNTAGISTKSTL
GGLLGQGQDARDPDFDTNSRSVLQVDKPSIRWVKGMH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaaagccaagacaccccgtccagtagccaggcgctgtaccaacatggcgttt
ctttccgcaatactacccatggtaatgggactgaccattgtagtggctacagacgggtca
gagtgccccggtgaagggaggtttcctgatcctaatgcatgtggaggattcatggactgc
atagccaaaaagactggcttcagtgtaacaagggatcactgcaatggattcgtgtacaat
gctacatcaatggattgttcaacaacaccgtgtggctcgcgtcgtgaacgtagtgttacc
aatgacttccatcccttgtcgcatctgtgtgaaagtcaacctaaccggttcttgtgtgcc
aactgcaagaccttggttcactgtgtaaagggacaagccttagttcgtcagtgtacagaa
aatttctattgtacagataaggttggctttggaggtgctgtatgctaccctgatgaacct
gatgcgtgtctgtgcttgaagccaaacgagtttcgtgttgatccctatgacccacaaagg
tttttctcgtgtgagaatgttggctcacagccagaaagctacaagtgtcctgagggtaag
gagttcgatgaaggctctgcccaatgtgtaaaccaagtgggcttcccagaatgtgttaaa
tctggaacctttgcaaacccccaaaactgtggtgaatactactcgtgcattcccttgaga
catggctgggtgcagaagttctacatgtgcagtggaaaccacttgttcaacgagagaaca
aagagctgtgaagatccttgcaccctgaaattcgtgtgccaacaggagggaagatttcca
gacccccttaacatgcagcattacttcgaatgtttcatggaatttggccagatggtacaa
ctgcgttatcagtgtccccatggatacatgtggagtgaagaaagctttggancaggaaag
tgtgtagaggcaacagaagagtacgccgattatccctttgctcattgtgatatcccagat
gatcattgtccagacacggatccatgtttgcaaaatccttgctttactggggtagcttgt
acatttacaagcatagcacctttttatacctgtggcccctgccctgcaggatatgttggt
gatggagaaacctgctatgccttgcagtgcgctgttgggtttgctggcattggtggtgac
tgtgcccctgactctgacctggacggctacccagacacagagctaggatgttcaagcaaa
tactgccgtagggataactgcatcaataggccaaattctgggcaagaagatgctgatggt
gatggccttggtgatgcttgtgacttagatgctgatggagatggattcaacagtaattcg
gataattgtcccctgatagccaatcctcagcaacaagatacagactcggatggacaaggc
gatgtctgtgacaactgccctgcagtgccaaacccaagccaaagggatgttgatggggac
caagtgggcgacgcatgtgatgatgatctcgacaacgatggatccctgaatgcagcagac
aactgtccctcgcttgctaatagcaaccaggtggatgctgatggtgatggcattggagat
gtttgtgacaactgtcccttacatcctaatcctggacaggaagatggagatcaagacctt
ctaggtgatgcttgtgatagcaatgccgactcggatggggacggtgtggataacgatgta
gacaactgcccatctgtagcaaacagtaaccagctggatgtagatggtgatggcagtggt
gatgcatgtgatgcagacagtgataacgatggtgttgatgacactatcgacaactgcgta
atgatcccgaatccaggccagatggacagtaatggagatggccttggtgatgcttgtata
actgactttgatggtgacaaaatcgacgatttggacgacaattgcataaaaaatcccaat
gtacatgctacagacttcaggcaactccaaatggtagccctagaaccacagagtgcaagt
gcccctccagtatgggtcatctatgatgatggtgcagagattcaccagattgtgaattct
gatcctgctctagcagtgggtgaccacgtaatgattgatgtagactttgatggcaccttc
tttattgaagatactagtgatgacgactttgttggctttgtatttgggtaccaaagcaat
gccaggttctatgttgtggcatggaaaaagtctccacagaactggtttgccaacgctgag
aggggcgttaccttaaaggtggtcgactctgctacaggccctggcccagcacttagggat
gccctgtggcttaccggttccacaccaaatcaggcaacactgctctggcatgatggcagc
attggatggaccccaaatgtggcgtatcgctggcaacttcaccaccgtcctactattggc
accattaggttctacttgtaccagggcactaatctagtcatggactctggaaacatttat
gatgacaccctgcaaggaggaagactaggactatattgcttctctcaagaagagattatt
tggtctaatgtaaagtacacttgtgaagatggtgtcccccaagccatgtttgacgacttg
ccacaaatcctcaaggaccaagtcatgaacactgcaggaataagcacaaaaagcaccctg
ggtggactccttggacaaggtcaggatgcacgagatcctgattttgataccaacagtcgg
tctgtcttgcaggttgataaaccttcaataagatgggtgaagggtatgcactag
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