Penaeus chinensis (fleshy prawn): 125042794
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Entry
125042794 CDS
T08118
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125042794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125042794
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125042794
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
DUF5660
Rop-like
FtsL_2
Motif
Other DBs
NCBI-GeneID:
125042794
NCBI-ProteinID:
XP_047494643
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All DBs
Position
32:complement(28571105..28604534)
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AA seq
583 aa
AA seq
DB search
MATFGVKTGGTPGAAAGGGFSFGNQNPAAGGGFNFGQVQQQQAAPAAAGAVAPQANKSLF
GTPPAGTQRLGFNFGTLGGTPSTSAAATTSTASSFSFSSTATPATSTTTFGGFNFSSTPA
ATSASGFSLGGATPSTVAAGFSLGGTGLAPTPTSSAAGTASGFSFTGLGGATATSAVPAT
DFSAGLGGAQTLQTSQAPKLGGGFGFTSLQTATTTTSSTGLGGINIGLGGAQPPSASAGN
NNVGAKPDGKSAKEQLLTNDLFGTIALFESRRDAENSASEENIRQTAAPFHKVAKKATEI
QQLLAELASEYQQLHTSAVNLKADVMKEAEQVEMARRTKETPMALQGENKAPEMYFINLV
RHFESEMMYCRTKIEEVSVCMQAANNPNETPDDISEVLQREHDTLKELASKVYAKHAHLV
ELGHRLNTSTKPNDQGFFRPHSKEDAKIPASAVVRPVLGGSSGLQAFQEQQERAKAVTLG
AAPPTMPLAQTTTPSMFGSNPNASSIFPTGAGFFGTGSFNLGSQTANTTFGASKTFGGNT
STFGAFGSNTSGVQQSSPFAISSPFNTKPFGDDDGDSRRKRRL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccacttttggggtgaagacaggaggaacacctggagcagcagcgggaggtggattc
tctttcggaaatcagaacccggcagcagggggaggattcaatttcggccaggttcagcag
caacaggcagcaccagcagcagcaggagcagtggcaccccaagccaacaagagccttttt
ggcactccacctgccggcactcagcgccttgggtttaattttggcactctgggtggcact
cccagtacctcagcagctgccacaacaagcacagcctccagcttcagcttcagctcaaca
gccaccccagctacctcgaccactacctttgggggcttcaacttcagcagtacaccagct
gccaccagtgcgagtggcttttcattaggtggtgcaacaccgagtacagtggccgcaggc
ttcagtctcgggggaaccggcctggcccccacacctacctcaagcgcagcaggcaccgcc
tctggcttctccttcactggccttggaggagccacagcaacctcagctgttcctgcaaca
gatttttcagctggattagggggtgcacaaaccctgcaaacatcacaggcacccaagctt
ggaggcggctttgggttcacaagtttacagaccgcaaccaccaccacaagttccactggc
cttgggggtatcaacataggacttggaggggcacaacctccatcagccagtgcaggtaac
aacaatgtaggagcaaaaccagatggcaagtctgcaaaggagcagcttttaacaaatgac
ttgtttgggaccattgcactcttcgaatctcgccgcgatgccgagaactcggcttcagag
gagaacatccgacagacagctgcacccttccataaggtggccaagaaagcaacggagatc
cagcagctgcttgccgagctggctagcgagtaccagcagctgcataccagtgctgttaat
ctcaaggcagatgtaatgaaggaagcagagcaggtcgagatggcccgtcggaccaaggag
accccaatggccctccagggggaaaacaaagcccccgagatgtacttcatcaacctcgtc
cggcacttcgagtccgagatgatgtactgccggaccaagatcgaggaggtgtcggtgtgc
atgcaggcggccaacaaccccaatgaaacgccggacgacatatcggaggtgctgcagcgc
gagcatgacacactaaaggagttggccagcaaagtgtatgccaagcacgcgcaccttgtc
gagctaggtcaccgcctcaacacctccaccaagcccaacgaccagggcttctttagaccc
cattccaaggaggatgccaagatccccgcttcagctgtggtgcggccagtgctagggggc
agcagcggtctccaggcattccaagaacagcaggagcgagccaaagctgtaacactaggt
gctgccccccctaccatgcccctcgcacaaaccaccacaccttcaatgtttggaagcaat
cccaacgcctcgagcattttcccaacgggtgctggtttctttgggactggcagcttcaac
ttgggctcacagactgccaacaccacctttggagcctcgaagacctttggcggaaacacc
tccaccttcggggcattcggcagcaacacctctggggtccagcagtcgagcccctttgcc
attagctccccattcaacacgaagccgttcggagacgatgatggcgacagcagacggaaa
aggcgcctgtga
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