Penaeus chinensis (fleshy prawn): 125043023
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Entry
125043023 CDS
T08118
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125043023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125043023
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125043023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Tropomyosin
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
125043023
NCBI-ProteinID:
XP_047494931
LinkDB
All DBs
Position
33:complement(19864206..19910809)
Genome browser
AA seq
2522 aa
AA seq
DB search
MAEAASVSEEIFALISEEEKKSISDVLAKRLKELWETKVKEITALKIDNEKQKITGDQEK
FQLERELVAVRTQLEEETRLKDEVKTRSEELEQRLNQSDTEVQNAKARINALSREIQHSH
SEQENASTQSAAMAGSLESRNKRLQELQEQVEKLEEQLTVVTRAKCEAVIRAEEAGSREL
HLQYKEKRLEQERSLLTRQVDRLQQQLEQRVEESVNQRREHSTTILRLQTDLNHKLEELR
VEREETERTQKGFEEKSQRIEELLSALNASRESEMKLDETYRQELVAQKKLADIYQASCQ
DEKERCTELEKAVEELRKLLQEASEQYGCLERAKKAAEEESAEALQQSNLLVKELKEELD
KVNLLMEASSKKDLGGLEDLSPAASAASQLVSRGLSLTQLYSEYMSVSEKLIGTEEENKR
LKRYVDQILQEIEDRVPVFRKQRDDHQKSLETITSLHSQLEETLADLEKQRIESQEARRR
AKYLERENSRLGMEVKDLGKQVTILVMQVEAARAGQPPPVIPVENDSPTGAGEVISQRLV
AFRNVAELQEQNTHLRTSLRELSQQMEAVEKEAVENRTQDLQEELDAAKAQLSELQAARE
RQESLMENIVNQRNMYRTLLSQQSPQTKPPSSAQSSQSSDVSQEELKKVKEELENSKKEL
ATLKKEHEEYREEKKKNDKLLQDEYENLRANMDKTRNENVKLISQAEYNDERIKTQQNNA
EVLQRQIMALEKNNSTLQGIIGRHESTIETLRNELLTLQKKLSCAEVTLENLREERMLLK
ESEARLLSERESHERNQASQAMVLANLETIKINLERSDATEKMRYENQIQELTEQCSRLK
AKLESNIEVKEATMKLTDAENRIKSMHQEHAAMTKQLLEVKSELSATKTRLAEAQDKMRS
APSPQGNKARGSSPVASSPFRLAGSSPQIRDLQVQLTEERASVATLQASLDQSKRNIEEL
MGVTKQQEKQLAESNEASKIAQGQLSKLEKEKSEVEEKLAKTESQLSEAVEEAEAVKTLL
QTQLAKMQDELQVAQKKLSDANEALTTAKGEEEKAKKEAQQKAQLAGEVQDKYEREVMLH
GADLKALAVLKEKQAEYNAELQQVTMAKLKAEEAVRDTRLGFEERENLLRRENKDLLMRS
HELEEQNKALLDQFTQLSDKMAALQTKLSVPGADNPNASFTEDEARSSDQLREVIKYLRR
ERDVSAGKCEVALAEVQRLTAQKKILESQIEQVTKNLAEEREKSQASLDSAGRYGELLRK
VHTMDALADSNRLLREEKEGMQNTITEFKAKYESLEKQIEPLQEKQRLCDNKIESLMLEK
KSIENEKDLYKKRTQELVEKLNRAKPEDFIRLQQEVVEQQKTLQSKEAEVSRLKNQLAQL
SKNQQMIVNQKNQFQQQLNIVRSDLHKTTEEFKKLTMEKNRIQAQSGEEFKRVNMEKARL
QQQLVATQERVRSLETSSQHAQATHQQEMSKAQEQRNREQQQERQQIMDLKQREEALKNH
LDATRKEAESLSEKFKDAETKLADALKKADNFEKQALQLRKIATKYKKAAEGGSATAATT
AGDGSEEPASGGTIVSPDKVKEYEETIASFRQKQEKAQEDATKLQQELTALKQTLSSKDS
ESNVFKTQSQQKDSELTKLRSELETKTRELQVAQTVATQLKQNVTKQIADVTKRLDDKKQ
MYENRVSLLEKERDHFSREVEMVNKKLQIQQRQLENLQKQAAGTSKPSTSGVPSEKTGFE
PPPTANIKPMNAPVAPSASPRSQTATQVVPPSRAIPTASIRPMAPPSGGSAPPQGSTVVV
VSPLETHSDGMVSSTVTLPQATVTPTPAISAPTLLTTATTTPAATTMTSTLTATVSPTPA
SASLTTPVAPAVALPSTPSSQSTQPSASQSTLASQSSSVSQSSAIAESTPASQPTSSGPT
VQMSKSSGHLQTAAAASSTGTAQSTLASQSSSSGQSGTASTSIVVPIVSPVPASPAQHAR
QDTQEVSADALVSQAIALVSPLSSQEVAGPSSAGSAKRKLEPAEATTKEAKRACVEEDEA
GPSSSHGGQENEEEQSVTPEDHDTVVVDSDGEEPDQEYIDQGEDDDDDEDEEDDEDDDDE
AIEDEDQMDDEDEDIRVIEDNEDDIERDDGSRGFSVGNNQEGREASEDMRSADAEAEAAS
ETSAHVEESNNESPDAPSESQRPQPSGGSSQPSSSGQNEGPSQTSPGVPLGLPRPVVRQE
RPVGRQNLAPFSQLPHYEEGGDDSIVPSTPTLFVPRRGDGFSEAVSSPQVPSGGFVFGSN
AEVANPPQTSGLAQMAEGGLIDDTRIDLGLDEGNRSQPTTPLRRSPTAELGAEGGVSTSE
GESTREPPTVLVTGGEQSSGETSRDCEDNFTEADSMAVDIGDDNEVEEEEEEDEEDDVEE
GEHDDVIDVEGEEDGNEEEESQGGENEEREGSSEMEQPSADVSSAPSSTPSSPSNPARRI
TPITWDNSPQRMRADRGRGFMGMPGGLGLRRGRGFPMRGAPLLRGPQRARRSRPGSFPRG
GM
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcgtctgtaagcgaagagattttcgctctcatttcggaagaggagaag
aagtccatctcagatgttttggccaagaggttgaaggagctgtgggagacgaaggtcaag
gagatcacggcgctgaaaattgacaacgagaagcagaaaataacgggagaccaggaaaag
ttccagttggagcgagaactggttgcagtccgcacgcagttagaagaagaaactagattg
aaggatgaggtgaagacaagaagtgaagaactagaacagaggctaaaccagtctgatact
gaagtccaaaatgccaaagccagaatcaatgctttgtctcgggaaattcagcattcacac
agtgaacaagaaaatgcatcaacacagtctgctgctatggctggcagcctggagtcaaga
aataaaagactacaagaactacaagaacaggtggaaaagcttgaggaacaattgacagta
gtaacaagagcaaaatgtgaggctgtcataagggctgaagaagctgggagcagggagcta
cacttgcagtacaaagagaagagactagagcaagaacggagtctcttaacacgccaggtg
gatcgcctacaacagcagttggagcagagagtggaggagagtgtcaaccagcgtagagag
cattcaacaactattctcagactacagacagatctcaatcacaaactggaagagttacga
gtggagagagaggaaactgagagaacacaaaagggctttgaagagaaatcgcaaaggatt
gaagaacttctgtcagccttgaatgcctccagagaatcagaaatgaaactggatgaaact
taccgccaagaacttgtagcacagaagaaactggctgacatttatcaagcttcctgccag
gatgagaaagagcgttgcactgagttggagaaggcagttgaagaattacgcaagctctta
caagaggccagtgagcagtatggatgtttggagcgtgccaagaaggcagcagaggaagag
agtgcagaagctcttcagcagtcaaatttgcttgtcaaagaactcaaggaagaactagat
aaagtgaatctgttaatggaagcaagctctaaaaaggatctaggaggactagaagacttg
tcacctgctgcaagtgctgcaagtcaacttgttagtcgaggccttagtctgacacagttg
tactcagagtatatgagcgtgtccgagaaactaattggcacagaggaagaaaacaagaga
ctaaaacgttatgtagaccagatcttacaggaaattgaggatcgagttcctgtattcagg
aaacagagagatgatcaccagaagtcactagagaccattacttccttgcattctcagttg
gaggaaactttagcagaccttgagaagcagaggatagaatcacaggaagctcgacgcaga
gcaaaataccttgaaagagaaaattcccgccttggaatggaagtgaaagaccttggaaag
caggtcaccatcctggttatgcaggtagaagcagctagagcagggcaacccccaccagtt
attcctgtggaaaatgacagtccaactggagcaggtgaggttatctcacaacgattggtt
gcatttagaaatgttgctgaactccaagaacaaaacactcatctcaggacttcattgaga
gaactgtctcagcagatggaggcagttgaaaaggaggctgttgaaaacaggactcaagat
ttacaggaggagctagacgcagctaaagcacaattatcagaattgcaagcagctcgtgaa
agacaagaatcactcatggaaaatattgttaatcagcgtaacatgtaccgcactcttctg
tctcaacaatccccccagacaaaaccaccatcttcagctcagtcttcgcagtcttcagat
gtttctcaagaggaattaaagaaagtgaaagaggaacttgaaaattcaaagaaagaattg
gcaacattaaagaaggagcatgaagaataccgtgaagaaaaaaagaagaatgataaattg
ctgcaggatgagtatgagaacctaagggccaacatggataagacaaggaacgagaatgtc
aaactgatatcccaagctgaatacaatgatgaaaggattaagacacaacaaaataatgct
gaagttctccagaggcagatcatggccctggagaagaataattcaacactgcaaggcatc
attggacgccatgagagcacaatagaaactctgcgtaatgagcttctgactctgcagaag
aaactttcttgcgctgaagtcacacttgaaaatcttagggaggagagaatgctgttgaag
gaatctgaagcacgactgctgtcagagagggagtctcatgaaagaaatcaggcatcccag
gctatggtccttgcaaacttagagaccattaagatcaatttggaaagaagtgatgcaaca
gagaagatgcgatatgaaaaccagattcaagagctaacagagcagtgcagccgtttgaag
gccaagttggagtcaaacattgaggtcaaggaagccactatgaagttgacagatgcagag
aatcgcatcaagtccatgcatcaagaacatgctgcgatgacaaagcaacttttggaagtg
aagtcagagttgtcagccacaaagactcgattagcagaagcacaagacaaaatgagatct
gcaccatctccacaaggaaataaagcaagaggaagcagtcctgttgcatcatctccattc
cgactggctggatcatcaccccagattcgtgacctgcaagtgcagttgactgaggagaga
gcatcggttgcaacactccaagcatctcttgatcagtctaaacgcaatattgaggagctc
atgggggtcaccaagcaacaggagaagcagttggctgagtcaaatgaggccagcaagatt
gcccagggacagctttccaaacttgaaaaggaaaagagtgaagtggaagaaaaactggca
aagactgagtctcagcttagtgaagctgtagaagaagcagaagctgtaaagactcttctt
cagacccagcttgcaaagatgcaagatgagttgcaagtggctcagaagaagttgagtgat
gcaaatgaagctctcacaacagctaaaggagaagaagaaaaggcaaagaaggaagcccaa
caaaaggcacagcttgctggagaagttcaagataagtatgagagggaggtgatgttacat
ggtgccgatttgaaggctttagctgtcttgaaggaaaaacaagctgagtataatgcagaa
ctccagcaagtcaccatggccaaactgaaggcagaagaagctgtcagagacacccgatta
ggatttgaggaaagagaaaatctgcttcgtcgagaaaataaagacttgctcatgaggagt
catgaacttgaggaacagaacaaggctcttcttgaccagtttacccagttatctgacaag
atggctgcattgcagactaagctgtctgtgcctggggctgataatcctaacgcctccttc
actgaggatgaggctagatcctcagatcagttaagagaagtcatcaaataccttagaagg
gagcgagatgtatctgccggaaagtgtgaggtggccttggctgaggtacagaggctgact
gctcagaagaagatcttggagtcacagatagaacaggttactaagaacctggcagaagaa
agagaaaagagccaagcctcacttgatagtgctggacgatatggagaacttcttaggaag
gtccacacaatggatgccctggcggacagcaaccgtctccttcgtgaagagaaagaaggc
atgcaaaacaccatcactgaattcaaggcaaaatatgaatctttggaaaagcagattgaa
ccgctacaagagaaacaaaggctttgtgacaataagattgagtctttgatgctggagaag
aagagcattgaaaatgaaaaggatctttacaagaagagaacacaagagttggtggagaaa
cttaaccgtgccaaacctgaggacttcattaggctacaacaggaagtggttgaacaacag
aagaccttacagagcaaggaggcagaagtgtcaagattaaagaaccagcttgctcaattg
tccaagaaccagcaaatgattgtgaaccagaagaatcaattccagcagcagctgaatatt
gtgcggtcagatcttcacaagaccacggaagaattcaaaaagcttacaatggagaaaaat
cgtattcaggctcagagtggtgaggagttcaagagggtaaacatggaaaaggctcgcctt
cagcaacagctagtggcaacccaagaacgtgtgcgcagtttagaaacctcttcacagcat
gcacaagccactcatcaacaagagatgagcaaggctcaggaacagcgcaatagggagcaa
cagcaggagaggcaacagattatggatcttaaacagcgtgaggaagctctcaaaaatcac
cttgatgctacaagaaaggaagctgaaagcctctctgaaaagttcaaagatgctgagaca
aagttagctgatgctctgaagaaggctgataattttgaaaaacaggctctccagttgcgt
aagattgccactaaatataagaaggctgctgaaggaggctcagcaactgcagcaactact
gctggggatggcagtgaagaacctgctagtggagggacaatagtttcacctgacaaagta
aaggaatatgaagaaactattgcaagctttcgccagaaacaggagaaagcacaggaagat
gctaccaagctgcaacaagaattgacagcattaaaacagactctttccagtaaagattca
gaaagtaatgtcttcaagacacagagtcaacagaaggatagtgaattaacaaagttgcgc
agtgaactagagaccaaaacaagggagttgcaagttgcacaaactgttgcaacacaactc
aaacagaatgtgactaagcagattgctgatgttacaaagcgattggatgacaagaaacaa
atgtatgaaaatcgtgtcagtctgcttgagaaggaacgtgatcatttctcccgtgaggtg
gaaatggtcaataagaagttgcagattcagcaaaggcaacttgagaaccttcagaaacag
gcagctgggacttctaaaccatcaacaagtggagtgccttcagaaaaaacaggctttgag
cctcctccaacagccaacataaaaccaatgaatgccccagttgccccttcagcctcacca
aggtcccagacagcaacccaagtcgttccaccatcccgggccattcccactgccagtatt
cgacctatggctcctccttctggaggctctgctcctccccagggatcaacagtggttgtt
gtatcgccactagaaactcatagtgatggtatggtttcttccactgtgactctcccccag
gccacagttactccaactcctgccatttctgcaccaaccttgctgacaacagccactaca
acccctgctgccaccacaatgactagcacattaactgctactgtatcacctactccagcc
tctgcgtctctgaccactccggtggctccagctgttgccctaccatccacaccttcctcc
cagtcaacgcaaccttctgcttcacagtccactttggccagtcagtcatcttcagtatca
cagtcatctgcaattgcagaatcaactccagcttctcaacctacatctagtggtccaaca
gttcagatgtccaagtcatcaggtcatcttcagactgctgctgctgcctcatcgacaggg
actgctcagtccactttggcaagtcagtcttcatcaagtggccagtcgggaacagccagc
acttctattgtagtgccaattgtgtctccagtgccagcatctcctgcacagcatgctagg
caggacactcaagaggtatcagctgatgctttggtttcacaagctattgcccttgtatca
ccactcagctcgcaggaagttgcaggaccttccagtgctggttctgcaaagagaaaattg
gagccagcagaggcaacaactaaagaagcaaagagagcatgtgtagaagaagatgaagct
ggtccttcatcctcacatggaggacaggaaaatgaggaggagcagagtgttactcctgaa
gatcatgatactgtagttgtagactcagatggtgaggagcctgaccaagagtacattgat
caaggggaagatgatgatgacgatgaagatgaagaagatgatgaagatgatgatgatgaa
gcaattgaagatgaagatcaaatggatgatgaggatgaagatattagagtcattgaggac
aatgaagatgacatagaaagggatgatggaagtcgtggcttcagtgtaggaaataaccaa
gaaggcagggaggctagtgaggatatgagaagtgctgatgctgaggctgaagctgcttca
gaaacatctgcacatgttgaagaatcaaacaacgaatccccagatgcccctagtgagagc
cagagacctcagccatctggtggatcaagtcagccttcttcatcaggtcaaaatgaagga
ccctctcagactagcccaggggtgccacttggcctccccaggcctgttgttcggcaggaa
agaccagttggccgtcagaacttggcacctttcagtcagcttcctcactatgaagagggt
ggtgatgacagcattgtaccatcgacaccaactctgtttgtcccgaggcgtggagatggg
ttctctgaagcagtaagctctcctcaggttccatctggtggatttgtgtttggctctaat
gcagaagttgcaaacccacctcagacaagtggattggctcagatggcagagggaggttta
atagatgacacacgcattgatttgggtcttgatgaaggaaatagatctcagcccaccacc
ccgctaaggagatctcctacagctgaacttggagctgaaggtggagtgagtactagtgag
ggagagtcgacgcgcgaaccaccaacagttttagtgacaggaggtgaacagtcgagtggg
gaaacatcacgtgattgtgaagacaacttcacagaggcagattccatggctgttgacatt
ggggatgacaatgaagtagaggaagaagaagaagaggatgaggaggatgatgtggaggaa
ggagaacatgatgatgtgattgatgtggagggtgaggaagacggaaatgaggaagaggag
agtcagggaggtgaaaatgaggagagagaaggaagcagtgagatggagcaaccttctgcg
gacgtgtcaagcgccccttcatccactccaagttcaccctccaatccagctcgaagaatc
acgccgattacatgggataactccccacagagaatgcgagcagatagaggtcgtggcttc
atgggcatgccaggaggactaggccttcggaggggtagaggattccccatgagaggtgca
cccctcctgcgtgggccccagcgtgccaggcgatcgcgtccagggtcctttccaagagga
ggaatgtaa
DBGET
integrated database retrieval system
