Penaeus chinensis (fleshy prawn): 125043277
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Entry
125043277 CDS
T08118
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125043277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125043277
03041 Spliceosome [BR:
pchn03041
]
125043277
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125043277
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125043277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
125043277
NCBI-ProteinID:
XP_047495249
LinkDB
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Position
33:complement(317994..339169)
Genome browser
AA seq
757 aa
AA seq
DB search
MGRGDKDSEAGTRESKRRRKTAAEGAISLALTSEMPKKTVASSGSESEVPEAQAALRSTK
EKDSLKTIADTYQASLEHECQEARQRTEDEDQETVARIIQHIRFLMKEILKLKTEKPDQW
SAEVEERRVQVLMLILSLRRLSRVQKVRVRDARDKTAEARQSVDGVTLQLQNLLYEVAHL
KKEVRRCLEFQSADQEIDLVPVEQFYIEAPESISRPTETVDKPHEQRLARLQWELEQRRG
QTQLFDKLTQEKESVADMINEQERKLASLAPRINSILEATRPLQEALDLPLDAKREQQRI
VQLLPSPLYTLWVQASAYGEAFDPNIKVEVNGDVEAAKKLITKEEDARTENFSDSENDQD
QQEENLSRKKRARKSQKMDTDDVDDGVKQILALHPLSVKICVNTKDSNSVVITFYYMQVL
RIVTVKCSVHLQEKNKSVLSDVISGDTLLNCLFPKDDGEESPNPANFFQLVRLQIQLKDH
LASTGRPYKWAQNLSGLSFSTSEQTNADDGQDKAGGSTVTTIPPVENEVVIWQDSAEHMQ
NTIQAIRRRLQARLALHTQLVNLETANSTSSIAFPAELLRQHFPGKVCTEFKSWRSVTWS
EYKAAPTTQLLREYGVVTQQHLLFIAVFERKHVRLEALVAIFPDHPNTVPVFSLSMHWEG
HHQAANNPQLRQMEKEVNVHWDELVSTRNEQLHLLPLLLYRLAVCLDVFTEAYSAHADAH
QPDSQFHKEKIFFRPARGPDRAFPFKYHPKLGVFSQR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaggagacaaagatagtgaagcaggcactcgagagtcgaagcgccgtcggaaa
accgcagcagaaggtgccatctccctggcactgacgtcagagatgcccaagaagacggtg
gcctcttcgggcagcgagagcgaagtccccgaggcgcaggccgccctcaggtccaccaag
gaaaaggacagtttgaagaccatcgccgatacctatcaggcaagcttagagcatgagtgc
caggaggctcggcagaggactgaagatgaggaccaggaaactgtggctaggatcatccaa
cacattcgcttcctcatgaaagagatcctgaaactaaagacagagaagcctgaccagtgg
tcagctgaagtggaagaacgccgtgtgcaggtcctcatgctgatcttgtctttacggcgc
ttgagtagggtgcagaaggtacgcgttcgtgatgctcgagacaagacagcagaagcacgc
cagagtgtggatggtgtaaccctccagctgcagaacctgctctatgaggtggctcacctg
aagaaagaagtgagacgttgtctagagttccagtcagctgaccaggagattgacttggtt
cctgtggagcagttttacattgaggcccctgagtccatcagtcgtccaacagagactgtg
gacaagcctcatgagcaaaggctagcacggttgcagtgggaactggagcagcggcgtggc
cagacccagctctttgataagctgactcaagagaaggagtctgttgctgacatgataaat
gaacaggaacgtaaattggcatctttagcacccagaattaacagtattttggaagcaact
cgaccacttcaagaggctcttgatttgcctttggatgccaagagggaacagcagagaata
gttcagttacttccaagtcccttatacacactttgggtgcaggcatcagcctatggggaa
gcctttgacccaaacatcaaggtggaagtgaatggggacgtagaagctgccaagaaactt
attacgaaggaggaggatgcaagaacagagaacttcagtgactcggagaatgaccaggac
cagcaggaagagaacttgtcacggaagaagcgggctcgtaaatcacagaagatggacaca
gatgatgtggatgatggagtcaaacagattttggcattacatccactgtctgtaaaaatt
tgtgtcaacaccaaagatagcaacagtgtggtcatcactttttattatatgcaagttctg
cgaatagtaacagtcaagtgctctgttcacctacaagagaagaacaagtcagtgctatca
gatgtgattagtggtgacacactcctgaattgtctgtttccgaaggatgatggggaggaa
tcaccaaacccagccaacttcttccagcttgtgcgcctccagatccagctaaaagaccac
ctggcatccacaggacgaccttacaagtgggcacaaaatctgtctggcttgtcattctct
acaagtgagcagaccaacgcagatgatggacaagacaaggctggaggctcaacagtgact
acaatcccaccagtagaaaatgaagtagttatttggcaagatagtgctgaacacatgcaa
aataccattcaggccattcggcgcagattacaggctcggctagcattgcatacacagcta
gtgaatctggaaactgctaactctactagctctattgcgttcccagcagaacttttacgt
caacattttcctggtaaggtctgcactgaattcaagtcatggcgatctgtcacatggtct
gagtataaggctgcacccacaacacagcttctgagagagtatggtgtagtaactcaacag
catctgttgttcatagcagtttttgaacgtaaacatgtccgtctggaggctctcgttgcc
atttttcctgatcaccccaacacagtgccagtcttctccctctccatgcactgggaaggc
catcaccaagcagccaacaacccacagctcagacaaatggagaaagaagttaatgttcac
tgggatgaattggtttcaaccaggaatgagcagctccacctcttgcctctgctcttgtac
cgcctggcagtatgcctggatgtctttacagaggcctacagtgcgcatgctgatgctcat
cagccagactctcagttccacaaggaaaagatctttttcagacctgccagagggccagac
cgtgcatttcccttcaagtatcatccaaagcttggagtgttttcacagcgctaa
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