KEGG   Penaeus chinensis (fleshy prawn): 125043277
Entry
125043277         CDS       T08118                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125043277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchn03019]
    125043277
   03041 Spliceosome [BR:pchn03041]
    125043277
Messenger RNA biogenesis [BR:pchn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     125043277
Spliceosome [BR:pchn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    125043277
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 125043277
NCBI-ProteinID: XP_047495249
LinkDB
Position
33:complement(317994..339169)
AA seq 757 aa
MGRGDKDSEAGTRESKRRRKTAAEGAISLALTSEMPKKTVASSGSESEVPEAQAALRSTK
EKDSLKTIADTYQASLEHECQEARQRTEDEDQETVARIIQHIRFLMKEILKLKTEKPDQW
SAEVEERRVQVLMLILSLRRLSRVQKVRVRDARDKTAEARQSVDGVTLQLQNLLYEVAHL
KKEVRRCLEFQSADQEIDLVPVEQFYIEAPESISRPTETVDKPHEQRLARLQWELEQRRG
QTQLFDKLTQEKESVADMINEQERKLASLAPRINSILEATRPLQEALDLPLDAKREQQRI
VQLLPSPLYTLWVQASAYGEAFDPNIKVEVNGDVEAAKKLITKEEDARTENFSDSENDQD
QQEENLSRKKRARKSQKMDTDDVDDGVKQILALHPLSVKICVNTKDSNSVVITFYYMQVL
RIVTVKCSVHLQEKNKSVLSDVISGDTLLNCLFPKDDGEESPNPANFFQLVRLQIQLKDH
LASTGRPYKWAQNLSGLSFSTSEQTNADDGQDKAGGSTVTTIPPVENEVVIWQDSAEHMQ
NTIQAIRRRLQARLALHTQLVNLETANSTSSIAFPAELLRQHFPGKVCTEFKSWRSVTWS
EYKAAPTTQLLREYGVVTQQHLLFIAVFERKHVRLEALVAIFPDHPNTVPVFSLSMHWEG
HHQAANNPQLRQMEKEVNVHWDELVSTRNEQLHLLPLLLYRLAVCLDVFTEAYSAHADAH
QPDSQFHKEKIFFRPARGPDRAFPFKYHPKLGVFSQR
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgggccgaggagacaaagatagtgaagcaggcactcgagagtcgaagcgccgtcggaaa
accgcagcagaaggtgccatctccctggcactgacgtcagagatgcccaagaagacggtg
gcctcttcgggcagcgagagcgaagtccccgaggcgcaggccgccctcaggtccaccaag
gaaaaggacagtttgaagaccatcgccgatacctatcaggcaagcttagagcatgagtgc
caggaggctcggcagaggactgaagatgaggaccaggaaactgtggctaggatcatccaa
cacattcgcttcctcatgaaagagatcctgaaactaaagacagagaagcctgaccagtgg
tcagctgaagtggaagaacgccgtgtgcaggtcctcatgctgatcttgtctttacggcgc
ttgagtagggtgcagaaggtacgcgttcgtgatgctcgagacaagacagcagaagcacgc
cagagtgtggatggtgtaaccctccagctgcagaacctgctctatgaggtggctcacctg
aagaaagaagtgagacgttgtctagagttccagtcagctgaccaggagattgacttggtt
cctgtggagcagttttacattgaggcccctgagtccatcagtcgtccaacagagactgtg
gacaagcctcatgagcaaaggctagcacggttgcagtgggaactggagcagcggcgtggc
cagacccagctctttgataagctgactcaagagaaggagtctgttgctgacatgataaat
gaacaggaacgtaaattggcatctttagcacccagaattaacagtattttggaagcaact
cgaccacttcaagaggctcttgatttgcctttggatgccaagagggaacagcagagaata
gttcagttacttccaagtcccttatacacactttgggtgcaggcatcagcctatggggaa
gcctttgacccaaacatcaaggtggaagtgaatggggacgtagaagctgccaagaaactt
attacgaaggaggaggatgcaagaacagagaacttcagtgactcggagaatgaccaggac
cagcaggaagagaacttgtcacggaagaagcgggctcgtaaatcacagaagatggacaca
gatgatgtggatgatggagtcaaacagattttggcattacatccactgtctgtaaaaatt
tgtgtcaacaccaaagatagcaacagtgtggtcatcactttttattatatgcaagttctg
cgaatagtaacagtcaagtgctctgttcacctacaagagaagaacaagtcagtgctatca
gatgtgattagtggtgacacactcctgaattgtctgtttccgaaggatgatggggaggaa
tcaccaaacccagccaacttcttccagcttgtgcgcctccagatccagctaaaagaccac
ctggcatccacaggacgaccttacaagtgggcacaaaatctgtctggcttgtcattctct
acaagtgagcagaccaacgcagatgatggacaagacaaggctggaggctcaacagtgact
acaatcccaccagtagaaaatgaagtagttatttggcaagatagtgctgaacacatgcaa
aataccattcaggccattcggcgcagattacaggctcggctagcattgcatacacagcta
gtgaatctggaaactgctaactctactagctctattgcgttcccagcagaacttttacgt
caacattttcctggtaaggtctgcactgaattcaagtcatggcgatctgtcacatggtct
gagtataaggctgcacccacaacacagcttctgagagagtatggtgtagtaactcaacag
catctgttgttcatagcagtttttgaacgtaaacatgtccgtctggaggctctcgttgcc
atttttcctgatcaccccaacacagtgccagtcttctccctctccatgcactgggaaggc
catcaccaagcagccaacaacccacagctcagacaaatggagaaagaagttaatgttcac
tgggatgaattggtttcaaccaggaatgagcagctccacctcttgcctctgctcttgtac
cgcctggcagtatgcctggatgtctttacagaggcctacagtgcgcatgctgatgctcat
cagccagactctcagttccacaaggaaaagatctttttcagacctgccagagggccagac
cgtgcatttcccttcaagtatcatccaaagcttggagtgttttcacagcgctaa

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