Penaeus chinensis (fleshy prawn): 125043385
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Entry
125043385 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125043385
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125043385
Transcription factors [BR:
pchn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
125043385
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125043385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
Ank
Ank_2
Ank_5
Ank_3
Ank_4
TPR_2
TPR_1
LRR_6
TPR_8
LRR_4
DUF4807
LRR_At5g56370
TPR_14
TPR_CcmH_CycH
TPR_7
LRR_8
RPN7
TPR_9
LRR_2
Motif
Other DBs
NCBI-GeneID:
125043385
NCBI-ProteinID:
XP_047495437
LinkDB
All DBs
Position
33:complement(10664724..10673349)
Genome browser
AA seq
1405 aa
AA seq
DB search
MSNIARLEKDKRRAEHKNNLKEVASLANLLGQELQQAGDYEGALVQHREEVALCEALGDT
IGVAVAQRRMGEVYSEMGEWGKALQYLNKYLSLAKEAESLVEEQRAYATLGRTHLQKAEE
AGLRGQEEDQTKALTEAEKAFLRSLSVCERLKGAVDSQEHSQMRCRLYLNLGLVLDYRGN
VKKARHFISQALDLCTSHSLHEDAQRCHSALGVILLREGLQTDALQEGQKSLALAAKLHN
KGLQCDCHSFLAQVHLANADYEAAKKCYHKAYKLKHPDREDRERIEKNLKCVVSMCVAED
SLVMMGDCTDDEKIKLYEKLGDGSANLGFYTKAIEYYQKMLECAVRANKSPSFLAPIYLS
LAQTYSDNKQFLEAKQYYIKEYEIKLQEDASEACKTLLTIADVRERLGENYDTLSDTYHE
ARALAAKDRSPKLEVYVLRLYSCLPGIPEDVKCEIKEQMNSLANENDLDPEADLSDEEEN
ECEDEVDLNLVNFSDSEDDHENFDRPRQSRQKKSLVVKRNEKGETPLHKACIDGNLTMVR
KLLQQGHPVNPRDNCGWLPIHEAANHGYYDIILELIEAGAWISDRGGKQCDGITPMHDAA
SCGNIEIVRLLMNKGASVIAKTDDGDTPLESLVNYRRRAKLSKRGEEECIRLETELKETM
KRAGHKIPAKASDSSPSERFSPKESQPLKRRTSSHTSLSGIEEVSRQRRVSEEKNIKSKL
SSRLGFEEEESEGFQDYELPDPCATGSNSGERPSSACSLGNPIEADIEEDSEEFVNPLLI
DLQETKSATGTYLSAIESVGSAVRRAEIQKSSLSLPKDKKQALVTDEEVVDDWLDDDLGI
FSRKRKRVEKLEFEYKEPKRERRVLSEKNSSERILNRSKKVRQTKLTSIVQKYPEDIHDG
RNSPCREGDFSLSDLRDSPVTTETNRTVDSPATSNHESPITPSSTQSTISGGALRLRVRV
QNRVLLVPVAGAGQNRTVSWLAXEVTRRYYQLAGLRPHLTLTTQDGAVLDPNDPISLVLP
MEMSELQAQVTGWDLPPLPDRYSQACQALGTIPVSSISSILHRTEASTSLDLKHVRRITT
LQLQPVLRAIQCQQSLRSIDLSHCRLGDDGFRHLIEALQSLPSLEALHLRAVAVTTSSFV
VLTEAITSGEVPLKCLTSLDMSYNTLSGVKLSHIGTVLSLPLLTSLMLKHCSMSLIGQQQ
IPSISSCLKTLSLDYNIINSVSLANLLSCVPQVSSLTLSGVRSNQEAKADSSARLGVALS
GVLGAGEQCLLQQLDLSSCNLSDADLEDISAYLYRCPFLTSINLAHNPDITSSSVNALLD
ELTSNLVLPLTDLSIHGNKSFPVQVTAKIAATLRHKAATKYPMKKISISSMDSSSQLEDL
WKSQHQQKASVNTISGELFLECVES
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacattgcaaggcttgagaaggacaagcggcgtgcagagcataagaataacctt
aaagaggttgctagtttagccaaccttctggggcaagagctgcagcaagcaggagactat
gagggcgctctggtccagcatcgtgaggaagtagccttgtgtgaggcgctgggtgacacc
attggtgtggctgtggcacaacgccgcatgggggaagtgtacagtgagatgggagaatgg
ggaaaagcactccaatacctaaataaatatttatctcttgccaaagaggcagaaagtttg
gtggaagagcagcgtgcttatgcaactcttggtcgcactcatttgcagaaagccgaggag
gcaggattgcggggccaggaggaggaccagacaaaggctttgacagaagcagagaaggct
ttcttacgttccctttctgtatgtgaacgtctcaaaggagcagttgattctcaggagcat
agccagatgcgttgtcggctttatcttaatcttggtttagttctagattatcgaggaaat
gttaaaaaggcacgtcactttataagccaagcgctagatttgtgcaccagtcacagtctt
catgaagatgcacaaagatgccattcagcgcttggggttatcttgctgcgagaaggcctc
cagacagatgcccttcaagagggtcagaaatcattagctttggcagccaaacttcacaat
aaaggtctccagtgtgactgtcactcattccttgcacaggtccatcttgctaatgctgac
tatgaggctgcaaaaaaatgctatcacaaagcctataaactgaaacaccctgaccgtgaa
gatagagaaagaattgagaaaaatttaaagtgtgttgtaagtatgtgtgtagctgaggac
tctcttgtgatgatgggagattgcactgatgacgagaagataaaattatatgaaaaacta
ggggatggttcagccaacttgggattctacacaaaagcaattgagtattaccaaaaaatg
ttggagtgcgcagtccgtgcgaacaaaagcccttcgtttcttgctcctatatatctatct
cttgcacagacttattctgataacaaacagtttttggaggctaaacagtattatataaaa
gaatatgaaataaagcttcaagaagatgctagtgaagcctgcaaaacattactcaccatt
gcagatgtgcgagaaaggctaggagaaaattatgatacactctcagatacctatcatgaa
gctagagcattggctgctaaagaccgcagtccaaaactagaggtttatgtgctacgtttg
tattcgtgccttcctggtatcccagaagatgtaaaatgtgagatcaaagaacaaatgaat
tcactggcaaatgaaaatgatttagatccagaagcagacctaagtgatgaggaagaaaat
gaatgtgaagatgaggttgacctaaatcttgtcaacttttctgacagtgaagatgaccat
gaaaactttgacaggcctaggcagtcacgtcagaagaagtctcttgtggtaaagagaaat
gaaaaaggagaaacaccattgcacaaggcttgcatagatgggaatcttaccatggtgcgg
aagctcctgcaacaaggccatcctgtcaatcctcgtgacaattgtggctggctacccatc
catgaagcagccaatcatggttactatgatatcattcttgagctgatagaggctggagcg
tggattagcgatcgaggaggaaaacagtgtgatggtatcacacctatgcatgatgctgca
tcttgtggaaatatagagattgtcaggcttcttatgaacaaaggggcctcagtcattgct
aaaactgatgatggtgatacacccttggaaagtttggtaaattacaggagacgagcaaag
ctttctaaaagaggggaagaggaatgtattagacttgagacagagcttaaggaaacaatg
aagcgtgctgggcacaagataccagccaaggcttctgactcctctccatcagagcgcttt
agccccaaggaatcccagccactgaagaggaggacaagttcacatacatctttgtctggg
atagaggaagtgtcaagacagagaagggttagtgaagaaaaaaatattaagagtaagctg
agttctagactaggctttgaagaagaggaaagtgaagggtttcaggactatgagttacct
gacccttgtgctactggtagtaatagtggtgaaagaccatcaagtgcatgttctctagga
aatccaattgaagccgatattgaagaagactcagaagaatttgttaatcctttgctgata
gatttacaggagacgaaatcagcaacaggaacttacctgagtgcaattgagagtgtgggc
agtgctgtgcgtagagctgaaatacagaagagtagcttgtcccttccaaaggataagaag
caggctcttgtgaccgatgaagaggttgtagatgactggttagatgatgaccttggaata
ttttccagaaaaaggaaaagagtggagaaacttgaatttgaatataaggaacccaagaga
gaacgtagagtcctgtcagaaaagaattcatcagaaagaatattaaatcggagtaaaaag
gttcgtcagacaaagttgacctcaattgtgcagaaatatccagaggacatccatgatgga
aggaacagtccttgcagagagggtgatttcagcttgagtgacttgagagatagtcctgta
actacagagaccaacagaacagttgattctccagctacaagtaaccatgagagtccaatc
actcccagcagtacacagagtactatcagtggtggtgccctacgtctccgagttcgagtg
cagaatcgtgtcttattggtaccagtagctggtgctggacagaaccgaacagtaagttgg
ctagcangagaggtaacaagaaggtattaccagctagctggattacgtccccatcttaca
ctgacaactcaggatggtgctgtccttgatcccaatgatccaatatctctagtgctccca
atggagatgtcagagttgcaggcacaggtaacaggttgggacttgccgcctttgcctgat
cgctatagccaagcatgccaggctcttggcaccattcctgtgtcatcaatctcttccatc
ttgcaccgcacagaagcctcaactagtcttgatctcaagcatgtaaggcgtatcacaaca
ctacaacttcagccagttctcagagccattcagtgccagcaaagtttgcgaagtatagat
ctgtcacattgtcgactgggagatgacggcttccgccacctaatagaagccttgcaatcc
ttaccatcacttgaagctttgcacctgagagctgtagctgtgactacatcaagttttgtt
gtacttacagaagctataacttctggagaagttccactaaaatgcttgacatcattagac
atgagttataacacactttctggagttaaactttcccacatagggacagttttaagctta
ccattgctcactagtttgatgttaaaacattgtagtatgtcactcattggacagcaacaa
ataccctcgatatcttcatgtttaaaaacattgtcacttgattataacatcataaatagt
gtgtccctagcaaacttgctatcttgtgtaccacaggtgtcgagtctgaccctcagtggt
gtgagaagtaaccaggaggcaaaggctgactccagtgcacgtttaggtgttgcattgtct
ggagtcttaggagctggagaacagtgtctcttgcaacaactggaccttagctcttgcaac
ctctcagatgctgacctcgaggatatctcagcttacctatatcgttgtcccttcttgacc
tccatcaacttggcacacaatccagacatcacatcatcatctgtaaatgctcttcttgat
gaactcacatcaaatcttgttcttccactcactgatcttagcattcatggtaataagagc
ttcccagtgcaggtgacagcaaagattgctgcaacactgagacacaaagcagcaacaaaa
tatcctatgaaaaaaatatcaatttcaagcatggacagcagttcacagttagaggacttg
tggaaatcacagcatcagcaaaaagccagtgtaaacacaataagtggtgaattatttctt
gagtgtgttgagagctga
DBGET
integrated database retrieval system
