Penaeus chinensis (fleshy prawn): 125043539
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Entry
125043539 CDS
T08118
Name
(RefSeq) RNA-binding protein spenito-like
KO
K13190
RNA-binding protein 15
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125043539
03041 Spliceosome [BR:
pchn03041
]
125043539
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
125043539
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125043539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125043539
NCBI-ProteinID:
XP_047495657
LinkDB
All DBs
Position
34:complement(11644915..11647633)
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AA seq
723 aa
AA seq
DB search
MKRGADRDLSPSSKRSRSSVGRYEDSSEDEGRRSSRGGSPPGRRYPPPEPLHRSERDEFA
RAPPRPPAYKMLCVSNLHSKASDEMVREALYREFKRFGDVSVKVSQGADERLAYVYFRSA
DEAREAKHSKPRILFYDRPVVVEPMYEAARDYALPRGRSRTPPDYERGYRPRSPPGPDLE
DRYEPRFDRRRPPPPPHSEYYAEGPPLRQDEYSYRQHRGRGGPHGHYGPPLRGGFKHSFG
GRGGGGGGGGGGGGGGGGGGGGGGGGMIDSKRDKFPNYLHHVPPEEDPLATRTLFAGNLE
INISEEELRRIFGRYGVVDDIDIKRPPPGTGNAYAFVRYQNLDMAHRAKIELSGQYIGKF
QCKIGYGKVMPTTRVWVGGLGPWTSVTQLTQEFDRFGAIKKIEYVKGESHAYILYESLDA
AQAAVKEMRGVPLGGPDKRLRTDFAEVNPPPGTFPPGYKKEFDGEYRDEWGGGRGSGYED
YVGDYAGYGRGRGRGRGWHERGRGGHRGGYHGDYQRPDYRDYDGTPEGGEHPARSPDPGD
GSNDNGLTSARTLADVARATPTSWQGSLILKNSSFGTKMHLIEGDTEVAEMMQDEEGRPL
LRITQRLRLDQSRLDDVSRRISAPSTATILLSLPSTTAPQAPEEAAVQTRPLRNLVAYLK
QKEAAGVITLNSTSKESNTQGVLYAFPPCAFSLDLLHRVSPGLTEETTRDDHLVIVIVRG
TAA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggggtgcggacagggacttgtctccctccagtaaaaggtcgagatcgagtgtg
gggcgctatgaggacagcagtgaggacgaggggcgccgcagcagccgcggaggaagtccc
ccagggcggcgctaccccccgcccgagcccctgcaccgctcggagcgcgacgagttcgcg
agggcgccgccgaggccgcccgcctacaagatgctgtgcgtgtccaacctgcactccaag
gccagcgacgagatggtgcgcgaggcgctgtaccgcgagttcaagaggttcggcgacgtg
agcgtgaaggtgtcgcagggggcggacgagcgcctggcctacgtgtacttccgcagcgcc
gacgaggccagggaggccaagcacagcaagccccgcatcctgttctacgaccggcccgtg
gtggtggagcccatgtacgaggcggcgcgggactacgccctcccgcgcggccgctccagg
acgccgcccgactacgagcggggctacaggccgcgcagccccccggggcccgacctggag
gacaggtacgagccgcgcttcgaccgccgcaggccgccgccgccgccccacagcgagtac
tacgccgaggggccgcccctcaggcaggacgagtacagctacaggcagcacagggggcgc
ggggggccccacgggcactacgggccgcccctgagggggggcttcaagcacagcttcggg
ggcaggggcggcgggggcggtggcgggggcgggggtggaggagggggcgggggcggcggc
ggcggcggcggcggcggcatgatcgacagcaaacgcgacaagttcccgaactacctgcat
cacgtgccgcccgaggaggacccgctggccacgcgcacgctgttcgcgggcaacctggag
atcaacatcagcgaggaggagctgcggcgcatcttcggcaggtacggcgtcgtggacgac
atcgacatcaagcggccgccgccgggcacgggcaacgcctacgccttcgtcaggtaccag
aacttggacatggcgcatcgtgccaagatagagttatcaggacagtacataggcaaattc
caatgtaagattggatacgggaaagtgatgcccacgactagggtgtgggtgggggggctg
gggccatggacgtcagtgacgcaactcacgcaggagtttgacagatttggtgctattaag
aagatagagtacgtgaagggcgagagtcacgcgtacattttgtatgagagtcttgacgcc
gcgcaggctgccgtgaaagagatgaggggcgttcccctcgggggccccgacaagaggctc
aggacggactttgccgaggtgaaccctccgcccgggaccttccccccgggctacaagaag
gagttcgacggggagtatcgtgacgagtggggaggggggcggggcagtggatatgaggac
tatgtgggtgactatgcaggctatggcagggggcgtggcagggggcgcggctggcacgag
agggggcgtggcggccacagggggggataccacggggattaccagaggccggattaccga
gactatgacgggacgccggaaggtggggagcacccagccagaagcccagatcctggtgac
gggagcaatgacaacggccttaccagcgcccgcaccctcgcggacgttgcacgggcaacc
cccacctcttggcagggctcgctgatcctgaagaattcctccttcgggacgaagatgcac
cttatagaaggagacacggaggtggcagagatgatgcaggacgaagagggtcggccgctc
ctgagaatcacccagcgcctccgcctggaccagtcgcgcctggatgacgtgagtaggaga
atcagcgcgccctcgacggcaacaatcctcctgtcgctgcccagcacaacggcgccccag
gccccagaggaggcggccgtgcagacgaggccactccgcaacctggtggcctacctcaag
cagaaggaggcggcgggggtgatcaccctcaactccaccagcaaggagagcaacacgcag
ggggtgctgtacgccttccccccgtgcgccttctccctcgacctgctgcacagggtgtcc
ccggggctgaccgaggagaccaccagggacgaccacctcgtcattgtgatcgtgagaggg
acggccgcgtag
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