Penaeus chinensis (fleshy prawn): 125043732
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Entry
125043732 CDS
T08118
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03420
Nucleotide excision repair
pchn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125043732
09124 Replication and repair
03420 Nucleotide excision repair
125043732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125043732
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125043732
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
125043732
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125043732
TCR (transcription coupled repair) factors
Cul4-CSA complex
125043732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
125043732
NCBI-ProteinID:
XP_047495936
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All DBs
Position
34:14219976..14242612
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AA seq
1137 aa
AA seq
DB search
MATAAYNYVVTAHKPTAVTACATGHLTSPTDLNLVVARNNRVELHLVTPEGLRPLKELTI
YGKIACMNLFTPMNESKDLLFILTTRYCAMILECVGDGENLEIITRAHGNVADKIGKPCE
TGMIAIVDPQARCIVLRLYEGLIKVIPLDKDNNELKAYNIRVDELQIQDIEFLYGCSNPT
IIVIYQDTHGRHIKTHEISLKEKEFSKMPWKQDNVETEASTIIAVPEPYGGAIIIGQEII
TYLTGTSHVTVAPALIKTSTIVCYGKVDSNGSRYLLGDLSGRLFMLLLDKPDDRSEATVK
VELLGEISIPECLTYLDNGVVFVGSRLGDSQLIKLNTEADASGQYVVIMQTFNNLGPIVD
MVVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEQASIELDGIKGMWSLSVNSPNHH
NTIVLSFVGLTRVLTLSGEEVEETEIAGFVADQQTFLSSNVKHSQLLQVTGSSCRLVNES
TGQLVCEWKPPEGRNISVVTANNNQVVAAAGQHIYYLTIQPSNLKLEAWTTVEHEVACLD
VSPLWEEDMASVVAVGLWTDISARVLALPTLEENAKEFLGGDIIPRSILMTTFEGHHYLL
CAMGDGQLFYFSYAPATGYLSDKKKVVLGTQPTTLRRFRSLSSTNVFACSDRPTVIYSSN
HKLVFSKVNLREVTHMCPLNADAYPNSLALATSEGITIGTIDEIQKLHIRTVPLGETPRR
IAYQEETETFGVITMRVDVTDSNGIRSGGMSASLGAHTTSSASNTSSLLKPPVQPPPEPG
QEVETHNLLVISQNTFEVLHCHSFHPGEYGLSICSTRLKDDSTVYYVVGTALVNPEESES
KQGRIILFSFTDGKLQQVAEKEIKGACYSLCEFQGKLLAAISSTVRLFEWTNERELRLEC
SHFNNVAALYLKTKGDFILVGDLMRSMTLLQYKTLEGSFEEIARDYDPNWMTAIEILDDE
LFLGAEHSHNLFVCHKDSAATSDEERQQMQEVGRFHLGDFVNVFRHGTLVMQGVPEATTV
TQGCVLYGTVHGALGLVTSLNLELYNQLLEMQKRLARVIKSVGKIDHDFYRSFSTERKTD
RCEGFIDGDLIESFLDLSPDKMKEVAQGLLISDGSGMKVEATPEDLIKTVEELTRIH
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcggcttataattatgttgtcactgcccacaagcccacagctgttacggca
tgtgctaccgggcacctaacttcgccgaccgacctgaacttggtcgtagctcggaacaac
agagtggagctccacctggttacacctgaaggattaaggcctctaaaagaactcaccatc
tatggcaagattgcctgcatgaacctttttacgcctatgaatgagtcaaaagacttgctc
ttcatattgacaacacggtattgtgctatgatcctggaatgtgttggggatggagagaat
ctagagatcataaccagagctcatggcaatgtagcagataagattgggaaaccatgtgaa
actggaatgattgcaattgttgaccctcaggcgcgttgcattgtattacgactctatgag
ggtctcattaaagtcattcctcttgataaagacaataatgagcttaaagcttataatata
agagttgatgagcttcaaattcaagacatagagttcttgtatggatgttctaatcccaca
attattgtaatatatcaagacactcatgggagacatattaagactcatgaaatttccctc
aaagaaaaggaattctccaagatgccctggaagcaggataatgtagagactgaggcctct
acaattattgctgttccagagccgtatggcggagcaatcattattggccaggaaattatc
acttacctcactgggacttcacatgtgacagtagcccctgccctcattaagaccagcacc
atagtttgttatgggaaggttgattccaatggttcaagatatctccttggagatttgtcg
ggccgtctcttcatgctgctgctggataagccagatgatcgctcagaggctacagtcaag
gttgaattgctgggtgaaatttccatccctgaatgtctgacataccttgataatggtgtg
gtctttgttggatctcgcttgggagattcacagctgatcaaactaaacacagaagctgat
gcctctggccagtatgtggtcatcatgcagaccttcaacaaccttggccctattgtggac
atggtggtggttgacctggagcgacagggccagggacagcttgttacctgttcaggagct
tttaaggaaggatctcttcgtattatccgtaatggcattggcatccacgagcaggcatca
atagaattggacggcatcaaggggatgtggtctctaagtgtaaattcgccaaatcaccat
aatactatcgtcctgtcatttgttggccttactagggttttgactctgagtggggaggaa
gtagaggaaactgagattgcaggttttgtagctgatcaacaaactttcttgtcttcaaat
gtaaaacatagtcagttgttacaggtcactggcagttcatgtcgcctggtaaatgaaagc
accgggcaacttgtctgtgaatggaaacccccagaaggccgcaacatttcggttgtgact
gcgaataacaatcaggtagtagcagcagctgggcagcacatctactatctcactatccag
ccttctaacctcaaactagaggcctggaccacggtggaacacgaggtggcttgcttagat
gtgtctcctttgtgggaggaagacatggcttctgtggttgctgttggcctgtggactgat
atttcagctcgtgtgcttgctttgccaaccctggaagagaatgccaaagagttcctagga
ggggatatcattcctcgttccatcctgatgacaacgtttgagggtcatcattacctcctt
tgtgctatgggagatggacagcttttctactttagttatgcacctgcaacaggatattta
tcagataaaaagaaggttgtcctcggtactcagccaacaactctaagacggttccgctcg
ctctcttcaacaaatgtttttgcctgctctgaccgacccactgtcatctattcatccaat
cataagcttgttttctcaaaagttaatttgagagaagtaacacacatgtgtcctcttaat
gctgatgcttatccaaacagtttggccttggcaacaagtgagggcattactattggtacc
attgatgagattcagaagttgcatattcgcactgtccctctaggagaaactccacgtcga
attgcgtatcaagaggaaacggagacatttggagtgattaccatgcgtgtggatgttacg
gatagtaatggaataagaagcggtggaatgagtgcatccttaggagcgcacaccacctcc
tctgcatccaacacctccagcctccttaaacctcctgtacagccaccaccagagcctggc
caggaagtggagactcacaatcttctagtaatatcacaaaatacatttgaagtgctccat
tgtcatagtttccacccgggagagtatggccttagcatctgctccaccagactaaaagat
gactcgactgtttattatgtagttggaacagctctagttaaccctgaggaatctgaatcc
aagcagggtcgcatcatcctcttctccttcactgatggcaaattacagcaggttgctgag
aaggagatcaaaggtgcttgctattctctctgtgagttccagggaaaacttctagctgca
atctctagtactgtccggctgtttgaatggacaaatgagcgtgaattgaggctagaatgt
tcgcactttaacaatgtagcagctttgtacttgaaaacaaagggagacttcatcctggtt
ggtgacctaatgaggtccatgacacttctgcagtacaaaacactagaaggtagttttgaa
gagattgctagggactatgatcccaactggatgactgctatagaaattcttgatgatgaa
ctgtttctgggagctgaacactcacataacctctttgtgtgtcacaaagatagtgcggcc
acttctgatgaggaacgccagcagatgcaggaggtgggtcgcttccacttgggagacttt
gtaaatgttttccgtcacgggacgctggtgatgcagggagtgccagaagctacaacagta
acgcaaggctgtgttctttacggaactgtacatggagctcttggtttggtgacaagtctg
aatttagaactatacaaccagctactggagatgcaaaaacgcctagcaagagttattaaa
tcagttggaaagattgaccatgatttttacagaagttttagtactgaacgtaagacggac
agatgcgaaggcttcatagatggagatcttatagaaagtttcctagaccttagtcctgac
aagatgaaggaagtagcacaaggactcttgatcagtgatggttcaggaatgaaagtggag
gcaacccctgaggacttaattaaaacggtagaggaacttaccaggatacactaa
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