Penaeus chinensis (fleshy prawn): 125043743
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Entry
125043743 CDS
T08118
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03030
DNA replication
pchn03410
Base excision repair
pchn03420
Nucleotide excision repair
pchn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125043743
03410 Base excision repair
125043743
03420 Nucleotide excision repair
125043743
03430 Mismatch repair
125043743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125043743
03036 Chromosome and associated proteins [BR:
pchn03036
]
125043743
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125043743
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125043743
DNA Replication Termination Factors
ELG1-RFC complex
125043743
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125043743
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125043743
Check point factors
HRAD17(Rad24)-RFC complex
125043743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
RCF1-5-like_lid
AAA_24
Viral_helicase1
Rad17
nSTAND3
Mg_chelatase
AAA_11
AAA_assoc_2
AAA_18
RuvB_N
AAA_19
AAA_5
ABC_tran
AAA_23
NTPase_1
MipZ
RNA_helicase
AAA_28
MeaB
AAA_25
IstB_IS21
DNAX_ATPase_lid
ATPase_2
FtsK_SpoIIIE
AAA_30
Motif
Other DBs
NCBI-GeneID:
125043743
NCBI-ProteinID:
XP_047495955
LinkDB
All DBs
Position
34:30407106..30417144
Genome browser
AA seq
345 aa
AA seq
DB search
MSAAATAMEVDGAQEAACPSASKTSHVPWIEKYRPITFPEIVGNEETVARLEVFAKQGNV
PNIIIAGPPGVGKTTTILCLARALLGPSFKEGVMELNASNDRGIDVVRNKIKMFAQQKVT
LPKGKHKIIILDEADSMTDGAQQALRRTMELYSNTTRFALACNSSEKIIEPIQSRCAMLR
YSKLTDSQVLAKVIEVCQKEDLSHTEDGLEAIVFTAQGDMRQALNNLQSTAQGFSHVSAE
NVFKVCDEPHPLLIKDMIQHCVKTKFDDAYKVLNHLWKLGYAAEDIISNIFRVCKNTNMA
EYLKLEFIKEIGYTHLRIVQGNSSLLQLSGLLARLCSKSLQPAAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggcggcgacagcgatggaggtcgacggcgcccaagaggccgcctgcccctcg
gcctccaagacttcccacgttccctggattgaaaaatatcggccaattaccttcccagag
attgttggaaatgaggagacggtggcaaggctcgaagtgtttgccaagcagggaaatgta
cccaacatcattattgcaggtcccccaggagtgggcaaaaccaccactatcctgtgtctt
gcgagggctcttcttgggcccagcttcaaggagggggtgatggagctgaacgcttcaaac
gaccgtggcattgacgttgtgcgaaacaagatcaaaatgtttgcccaacagaaagtgact
ctacccaagggaaaacacaaaattattatccttgatgaggctgatagcatgacagatggc
gcccaacaagcactccgaagaaccatggaactttattcaaataccacacgttttgcatta
gcttgtaattcctcagagaaaattattgaaccaatacagtctagatgtgctatgctgaga
tactcgaagcttacagattcacaggttctggctaaagttattgaagtctgccagaaagaa
gatctgagtcacactgaagatggtctggaagccattgttttcacagcacaaggagacatg
agacaagcccttaataatttgcagtctacagcccaaggtttcagccatgtgtctgctgaa
aatgtgtttaaggtgtgcgatgagcctcatcccctgttgatcaaggacatgattcaacat
tgtgtcaaaactaaatttgatgatgcttataaggttctgaatcatctgtggaaattgggg
tatgctgcagaggatattattagtaatatatttcgtgtttgtaaaaataccaacatggct
gagtacctgaaattagaatttataaaggaaattggctacactcacttacgtattgttcag
gggaactcctctctcctccagttgtcaggactcttggccagattgtgttccaagtccctt
cagccggctgcagcataa
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