Penaeus chinensis (fleshy prawn): 125043755
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Entry
125043755 CDS
T08118
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34-like
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchn03016
]
125043755
Enzymes [BR:
pchn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
125043755
Transfer RNA biogenesis [BR:
pchn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
125043755
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
NSRP1_N
Ntox28
Acyl-CoA_ox_N
PGBA_C
Motif
Other DBs
NCBI-GeneID:
125043755
NCBI-ProteinID:
XP_047495979
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All DBs
Position
34:11555666..11561322
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AA seq
292 aa
AA seq
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MTLTLTHGRVHVWNAKDADLIRRSYRIVGNLVGALPRNPHQVQMLGLPLQLMPEEVTLLI
EKDFAKLVEYEEMKKEPVSELKEIFSDCRERCYEEQVVAAAEQRKREIEVIADKILSGKR
KKLEKRMKSTPGSVTEAELNELTHEKVIEEECKKIQRLPEHLQVCEIFVENPLIKRLTPN
EVRWSFPSSNIEKLRYAVFKDMWERDYYLTNGIKFGGDFLVYPGDPVLFHAKFIVKCVED
VDQVNIHDLVTWSRIGTSTKKTLVVASLGSTKKVEYKSYQWVEGENHVMEEM
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgactctgacacatggaagagtacacgtatggaatgccaaagatgcagatctt
attcgtaggtcttacagaattgtcggtaatttggtcggtgctctccctcggaatcctcac
caggtacagatgttgggacttcctctccagcttatgccagaagaggttactttattaatt
gaaaaggattttgcaaagttggtagaatatgaagaaatgaaaaaggagccagtatcagaa
ctgaaggaaattttcagtgactgccgggagcggtgttatgaagaacaagttgtagcagcg
gctgaacagcggaagagagaaatagaagtcattgcggataaaatcctttctggtaaacga
aagaaattagaaaaacggatgaagagcacaccgggatctgtcacagaggcggagctgaat
gaacttactcacgagaaagtcattgaagaagaatgcaaaaagattcagagattaccagag
catcttcaggtctgtgagatatttgttgaaaatcccttaataaaaagactaaccccaaat
gaggtcagatggtctttcccttcaagtaacattgagaaactgagatatgcggtttttaaa
gatatgtgggaaagagattattacttaacaaatggtatcaaatttggtggagacttctta
gtgtatccaggagatccagtactgtttcatgcaaaatttattgtgaaatgtgtggaagat
gtagatcaagtgaacatccatgaccttgtgacctggtctcgcataggcacatcaactaaa
aagactttagtggttgcaagtcttggctcaaccaagaaagtggaatataagtcttatcag
tgggtagaaggagaaaatcatgtaatggaagaaatgtga
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