Penaeus chinensis (fleshy prawn): 125044053
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Entry
125044053 CDS
T08118
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
pchn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125044053
09122 Translation
03013 Nucleocytoplasmic transport
125044053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125044053
03041 Spliceosome [BR:
pchn03041
]
125044053
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125044053
Spliceosome [BR:
pchn03041
]
Complex C
Other components
EJC/TREX
125044053
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125044053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
LIP
RecC_C
DncV_C
Motif
Other DBs
NCBI-GeneID:
125044053
NCBI-ProteinID:
XP_047496457
LinkDB
All DBs
Position
3:complement(14423178..14445551)
Genome browser
AA seq
693 aa
AA seq
DB search
MADSGLTFHRVFTKVQSTLPHCIENNDAQSITDIFSSKINETTKHCVESAVRNYVTKTVI
NGELTEIDTIKAVTSICIELVRNELCLPTLPVLVLSDSFDMLTITQCEKLFTFVESNVSV
WKEDTFFAPCKTSVLRMCNDLLRRLSRSQNTVFCGRILLFLARFFPFSERSGLNLISEFN
LENVTTFTNVETELEEDEGTDKGVDGRLKLDYTLYTKFWSLQDFFRNPVQCFQKAPWKMF
TTYCGDVLEAFRSFKLDNVQSSATAAARLSRTLSEPVPAEGNSTLQPQVDQYFAKYLTNQ
KLLDLQFSDANFRRYVLLQILILAQYLTSDIKFKQEKLTEEQHEWVKKTEELVYILLAET
PPDGPVFVKTVKHILKREEMWSVWKNEGCPEFKKTSVNTLHNNSTHQSEEMNNDVNQKED
ADLKSPAKKRPKRKLGDLVRDFDKKNKHTGVNNEMTRLWNLKLDNLDACKMAERDFVPAL
EDYFTQAIEQLSPKSDGKEQDKLVNDSNFGWRGLRLLACRSPHFFTHSASPIATLPEYLT
TMIKKLAKELPSQLSEDIKVDEEDNKEEDKVIPVLEQNDGVKEEEEDMEDDTGEAERPEI
RAINLEEQRALAKNLEKIGGDKWKVLAKKLGFQSDEIEYIESEKSKDNGTVEDQAALMLQ
IWVENEGEEASKENLLYTLGGLKMTEIADNVFT
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcaggactgacttttcatcgagtttttacgaaagtacagtccacattacct
cattgcattgagaataatgatgcccaatctattaccgacatcttctcatcaaaaatcaat
gaaacaacaaaacattgtgtggaatctgctgtccgcaattacgtaacaaagacggtgatc
aatggagaattgacagagatagacaccatcaaagcagtgacatcaatatgcatagagctg
gtcagaaatgaattatgtcttccaacacttcctgttttggtcctctctgattcctttgac
atgctgaccataactcagtgtgaaaaattatttacatttgttgaaagtaatgtcagtgta
tggaaggaagacacattcttcgctccttgcaagaccagcgttcttcgcatgtgcaatgat
ctacttcgtaggctttctcgctcccaaaacacagtattttgtggacgaatccttttgttc
ttggccagatttttcccattctccgaacggtcagggttgaacctcatctcagaattcaac
ctggaaaatgtcactacttttacaaatgtggagacagaattggaagaagatgagggaacc
gacaaaggagttgatggacgactcaaattggactatacactgtacaccaagttctggtct
ttgcaggatttctttagaaatcctgtgcagtgcttccaaaaagcaccatggaagatgttc
acaacgtactgtggggatgtgctggaagccttcaggagctttaaactggacaatgttcaa
agcagtgcaactgctgcagctcgtctttctaggacattatcagaacctgttccagcagaa
ggaaactctactttgcagcctcaagtggatcagtactttgccaaatacttaacaaaccag
aaactgcttgacctgcagttctcagatgccaatttccgccgatatgtgttgctgcagatc
ttgattttggctcagtacctcacctcagacatcaagtttaagcaggaaaaactaacagaa
gagcagcatgaatgggtaaagaaaacagaagagcttgtttacatactcttggcagaaaca
cccccagatggacctgtgtttgtcaagacagtgaagcatattttaaaaagagaggaaatg
tggagtgtttggaaaaatgagggatgccctgaattcaaaaaaacaagtgttaacacttta
cataacaattctactcatcagtctgaggaaatgaataatgatgttaatcaaaaggaggat
gctgacttgaaatcccctgcaaagaagcggccaaagcgaaaacttggagacctggtccga
gattttgataaaaagaacaaacacacaggagtcaataatgaaatgacccgcctctggaat
ctaaaactggacaacttggatgcttgcaagatggcagagagagattttgtacctgcactt
gaggattacttcacacaagccattgagcaactctctccaaagtcagacgggaaagaacag
gacaaattggtgaatgacagcaattttggttggagaggtctgcggctgttggcctgtcgt
tctccacactttttcacacactctgcaagccccattgccaccttgccagaatatctaaca
acaatgatcaagaagttggcaaaggaacttccttcacagctttcagaagacattaaggta
gatgaagaagacaacaaggaagaggataaggtgatcccagttctagaacagaatgatgga
gtgaaggaagaagaagaggacatggaggatgacacaggagaagcagagagaccagagatc
cgtgccatcaatttagaggagcaaagagccctagcaaagaaccttgaaaagattggtgga
gacaaatggaaggtcttggccaagaaacttggatttcagagtgatgagattgagtacatt
gaaagtgagaagagcaaagacaacggtactgtggaagatcaagcagcccttatgcttcag
atctgggttgagaatgaaggcgaagaagccagcaaagagaatcttctgtacactcttggt
ggcttaaagatgacagaaattgctgacaatgttttcacttga
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