Penaeus chinensis (fleshy prawn): 125044252
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Entry
125044252 CDS
T08118
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125044252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125044252
Enzymes [BR:
pchn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125044252
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125044252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2773
Motif
Other DBs
NCBI-GeneID:
125044252
NCBI-ProteinID:
XP_047496761
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All DBs
Position
35:36844832..36849669
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AA seq
292 aa
AA seq
DB search
MPPKRKQTDDAPKQSENKKAKKEDFESDAKSKDGEPWNLKIVSWNVDGVRAWLKKDGMSV
LELEDPDILCLQETKCSEKKLPDELKNVKGYKSYFVEAKTEGYSGVALYSKEEPVSVKYG
FDDKEHDDEGRCITAEYEKFYLVTSYVPNAGKGLMTLDKRMDWDPKFRKYLKELDEKKPV
ILCGDLNVAHKEIDLANPKGNKKNAGFTQEERDGFTELLNAGFVDSFRHLYPDKEKQYTF
WTYMMNCRARNIGWRLDYFVISERLVPQLCDNLIRTSLYGSDHCPITLLMHM
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaagaggaaacagactgatgatgcaccaaagcaaagcgaaaacaaaaaagct
aagaaggaggacttcgaatctgatgccaagtcaaaggatggcgaaccatggaacctgaag
atcgtgtcatggaatgtggatggagtccgtgcatggttaaagaaagatggcatgtcagtg
cttgaattggaagacccagatatattgtgtctacaggagacaaagtgttcagagaagaag
cttcctgatgaactaaaaaatgtcaaaggatacaaaagctattttgtagaagcaaaaact
gaaggttactcaggtgtggcactctactcaaaagaagaaccagtgtctgttaaatatggg
tttgatgataaggaacatgatgatgaaggccgttgcattacagcagaatatgagaagttt
tatcttgtcacttcctatgtgccgaatgctgggaagggtctgatgacgcttgataagaga
atggattgggatccaaagttccgcaagtacctgaaggagcttgatgaaaagaagccagtt
atcttgtgtggagatctcaatgttgcccacaaagagattgatctggccaatccaaaggga
aataaaaagaatgctggctttacccaagaggagagagatggctttacagagctgttaaat
gctggctttgtagattcattcaggcatttataccctgataaagaaaaacagtacacattc
tggacatacatgatgaattgcagggctagaaacatcggatggagacttgattactttgtc
atatccgagagactggtgcctcagctgtgtgataacttaatccgcacgtccctttatggc
tccgaccactgccccatcacgcttctgatgcatatgtga
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