Penaeus chinensis (fleshy prawn): 125044262
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Entry
125044262 CDS
T08118
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125044262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125044262
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125044262
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125044262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
125044262
NCBI-ProteinID:
XP_047496796
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All DBs
Position
35:complement(33244697..33249337)
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AA seq
290 aa
AA seq
DB search
MEIQLACELPRVQNMVHVQGSAKPRLVTPGEVIYQDTSFMRGHGTYMEEGVQVASVAGYV
TRVNRLITVTPLRQVYQGAVGDTIVGRITQVQTNRWKVDVNSRLDAELRLSNIQLPGGEQ
RRSNLEDERGMRGLLREGDLVCVEVQKISDDGLLRLAARSIKYGKLSQGTLLAVSPSLIV
QDKQRMHDLPCGARVVFGANGYVYITPTVPQEQASTYTVNFEEVPVDIRKTIGRLRNCIK
LLAIHSIMISPTSVTSAFDISIEQEYEIKDLLKPDVMQDVAMATVQMLNE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggagatccagcttgcatgtgaactccctcgagtccagaatatggttcatgttcaaggc
tctgcgaagccaaggcttgtcactccgggtgaagttatttatcaggatacaagttttatg
aggggtcatggcacttacatggaagaaggagttcaggttgcatcagttgcaggatatgta
acccgagttaatcgtctcatcactgtcacccccctgcggcaagtgtatcaaggtgctgtt
ggtgacactattgttggacgtatcacacaggttcagactaacagatggaaagtagacgta
aattccaggctggatgctgagcttcgactgtcaaatattcagttaccaggaggagagcaa
cgtcgtagtaatttggaggatgaacgtggcatgagaggattactacgggaaggagacctt
gtctgtgttgaagttcaaaagattagtgatgatggactgttaagattggctgctcgtagc
atcaaatatggaaagctatcgcaaggaacactcctagctgtatcaccatcacttattgtc
caagacaagcagagaatgcatgatctcccttgtggtgcccgagttgtgtttggagcaaat
ggatatgtgtacattactccaacagtaccacaagaacaagcatcaacttacactgtcaac
tttgaagaggtcccagttgatattcgtaaaacaattggacgtcttcggaactgcatcaag
ctcttagcaatacattctatcatgatatccccaacaagtgtaacctctgcatttgatata
tctattgaacaggaatatgagataaaggatttgctaaaaccagatgttatgcaggatgtt
gctatggcaacagttcagatgctgaatgagtag
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