Penaeus chinensis (fleshy prawn): 125044265
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Entry
125044265 CDS
T08118
Name
(RefSeq) uncharacterized protein LOC125044265
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125044265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchn04121
]
125044265
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125044265
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125044265
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125044265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
125044265
NCBI-ProteinID:
XP_047496802
LinkDB
All DBs
Position
3:complement(28021558..28039426)
Genome browser
AA seq
1725 aa
AA seq
DB search
MSASRGGRLSRKRKKEDDCLTFTSIHDITDDFQEAATVFRVPKKAKTEKPPPAPRQRGRP
KKSNPARLNSQTANKTSGNSSRNDDSSPEILDEADEFEVEKKPKDTNLEKDAESQQLGED
EEFLELEQSVCSESEKLCPSCKHIVPSALIGDHIKECMQKFKLVRRSERNSTSAKSKAKE
GDIEDDDDLKEVLPRPVFSKSIERNLQNPPVKPEVRERTKSSATTEEAKNKREARKATKN
AKKDPDLAMALALSRSMVEDEAEKRASREEKLLELGLDDIVDEDRKAQPLLLPLPSAAGK
SQSSKGAAKGKGRKRNAVLRNTVLLNRSKEERENIISEKVAALLASEDTHTEEWTGPGNG
CRNGPLLTYKDKHCSLWEAAHSHVDQPLSEFYVPDLEPYIEPKKVAVGGLLRRLSQIAGR
LNLTAMDENSDSDSDGEGGRSYAVDRDSTQSVLAELLGSQDCLDITRAHNAIKAEDLSKF
QDFEDAGADPNVTMEAASGFWMLRLPGEGPEDNVKGDRESSGEKDEENKRDSSAGILETG
STCDSDGNNDDKSAGDCVKDKQADEGNSLSSETKTEDMEVDNVQKSKVVSFSTIDLVNDS
ASLESCVIDEVVMNPLEKSDKDRTLKTICDGAVEDDTSHDNSENTVLEDVRSEKEVGKQI
LTNCDDIEHRDSDESEDCEISIILDTSSGRAECNKDKLHESHHEIEMSNVSPEPKDSSSK
LQEVNDLVPAEDFFEKDSESSMTSTDTQIFLENGDCSFNTSLRQRLHTDETILYTNSVDL
SLLTRRHADSQEKKQESEHLNKDEEGRLTKARDKVGALTKTRIFSELQARGSNSGLDEWD
YKKKYSDKSLEPGSPDPLHAKLIYDWASLLASGEGADFTITTSEGSDLQAHIFVILVRCP
KLYQEVQSAGKKVTWADICFEGAYVFLSYIYTGTCKIKAKDDSLWMDVFDLALKYECDDL
VTYLESLYKANPSPVKLATPSHSKESMPNTDAGIMLTPKMGNSLIEGIIEKRVRRCIDLS
PVKNVSISSNKRNDDLTAEPVLHPSDSPELMVMSSDPEKDVGKGSSQSPDLFNESCVTDN
TARKTFPSGSTPVLTGFHHSPWDKALQDIHEESSLRLSVESKTSPTKPVSSTRSSDNFKS
NKLDTSSSASPDLSKMKQVTDIGNLGEESQGQNLRSNENVKDKDVNDCPEDEETDIIDLT
VCSSGSSNSVGTKADNLTAPSVQVDAPTDSETEEMEPLMLADGTDTNSEDNGECPEEPCM
AVVNIMQATPNKSLDTNYEKQEESMNRSYISTVWDDFDDIGCELLPIEVSPATPVKAVVT
PAVKGHYQDKEFSVSYDMDSVSPIQSNSPTKAEEDTSGVMQKRKWTPVKQMSSKTVDCEG
SKDRPISNLQSRLGSSAPDAVVASGSSFSDETLLQVATEFEDSNIWKDDFDSIDDVSDPL
LQKDAEKKKSKSKKDLLKTPNDKISLCKKPITPMPDYKNMPSPDLKKELEKYGIRPISRR
KATILLQHVYEQTHPLVTDSEAESSFCETPQRQPPEKNKKGVSTLHQKVLAKKAALQKNK
KERPNNKRKNAGSQAQPNLSAKQRGDKEEEEDCDQLNSSQTSTTSTDGSEFDCAEESMMV
GIGDDDDVLTSTQQVDIGSKVAKFIKCDPELYMKILLYEPIFVEDLQASLKANGIKTNMN
NLLEILDEQCITFRTQQGQRNRSRKRKSPKKKNAGSPTKSPKKNS
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctagtagaggaggccgcctgtctcgaaagagaaaaaaagaagatgattgcctg
acatttaccagcatacatgatatcacagacgacttccaggaagcagccactgtgttcaga
gttccaaagaaagcaaaaacagaaaagcctccaccagctccaaggcaacgaggccgtccc
aagaaatccaaccccgcgagactgaattcgcaaacagcaaataagacgagtggaaacagc
tcccgaaatgatgattcaagtccagagatcttggatgaggctgatgagttcgaggtcgag
aagaaacccaaagacacaaacttggaaaaagatgctgagtcacagcagctaggagaagat
gaggagttcctggaattagagcagtcagtgtgctctgaatctgagaagctgtgtccttct
tgtaaacatattgttccttctgccttaataggtgatcatataaaagagtgcatgcaaaaa
ttcaagctagtgagaagatcggagagaaattcaacatcagcaaaatctaaggctaaagag
ggagatatcgaagatgatgatgatttgaaggaagttcttccccgtccagttttttcaaag
tccattgaaaggaacctccaaaacccacctgtgaaaccagaagtcagagaaaggacaaaa
agttctgcaacaactgaggaggccaagaataagcgtgaggcaagaaaagccactaagaat
gccaagaaggatcctgatttggctatggcgttggctctctcccgctcaatggtcgaagat
gaagcagaaaagagggcatctagggaggagaaactcttagaattaggactagatgatatt
gttgatgaagacaggaaagcacagcctctgttgttgcctcttccatctgctgctggaaaa
agtcagtcatcaaaaggggctgccaaaggaaaaggaagaaagcgcaatgctgtgttgcgt
aatacggtccttcttaatcgctctaaagaagaaagagaaaatatcattagtgaaaaggtg
gctgctcttttagcctccgaagacacacacacagaggagtggacaggaccagggaatggc
tgtaggaatggacctttgttaacgtataaagacaagcattgcagcctttgggaagcagcc
catagtcatgttgaccagccgttaagtgaattttatgtgcctgatctggaaccttacata
gaacccaaaaaggttgctgtaggaggcttattgagaagactctcgcagattgctggtcga
ttgaatttaacagctatggatgagaactcggattcagacagtgatggagagggaggcaga
agctatgcagtggaccgagacagcacacaatctgtcctggcagaactactaggatcccaa
gattgtctagatataacacgtgcacataatgcaattaaggctgaagatttgtcaaagttt
caggatttcgaagatgctggagcagacccaaatgttactatggaagctgctagtgggttc
tggatgttaaggctaccaggtgaaggtcctgaagataatgtaaaaggggacagggaaagc
agtggtgaaaaggatgaggaaaataagagggactcaagtgctggaatattagagactggg
agtacatgtgacagtgatgggaacaatgatgataaaagtgctggtgactgtgttaaagac
aagcaagcagatgagggtaattctctatcatcagaaaccaaaactgaggatatggaagtg
gataatgtgcagaaaagcaaggtagtgtcttttagtactattgatttagttaatgatagt
gcttctttggaatcttgtgtcattgatgaagtggtgatgaatcctttggaaaaaagtgat
aaggacaggaccttaaagacaatttgtgatggtgctgtagaggatgatacctctcacgat
aattcagaaaatacagtgcttgaggatgttagatctgaaaaagaggttggtaaacagata
ctgaccaactgtgatgatatagaacatcgtgatagtgatgaaagtgaggattgtgaaatt
tctattattttagatactagctctggaagggctgagtgcaataaggacaagttacatgaa
tcacatcatgagattgagatgagtaatgttagtcctgaacctaaagactcttcaagtaag
ctacaagaagtgaatgatttggtgccagctgaagatttctttgaaaaagattcagagtct
agcatgacttccactgatacacagatatttcttgaaaacggagactgtagctttaataca
agtttaaggcagcgtctacacacagatgagactatcctctacacaaattcagtggacctt
tctctcttaacaagaagacatgcagatagccaagagaaaaaacaggaatcagaacatttg
aacaaggatgaagaagggagattaaccaaggccagagacaaagtaggagccttaacgaaa
accagaattttctcagaattacaggccaggggaagcaacagtggactagatgaatgggat
tacaaaaaaaagtattcagacaaatctctagaacctggatccccagaccccctgcatgct
aaacttatttatgactgggcttcattattagccagtggtgagggagctgatttcactatt
accacatcggaaggcagtgatctccaagcacacatctttgttatccttgtaagatgccca
aagttgtatcaggaagttcagagtgcagggaaaaaggtcacttgggcggatatttgtttt
gaaggagcatatgtatttctctcatatatttatactggaacctgtaaaattaaagcaaaa
gatgactcattatggatggatgtttttgatcttgctctaaaatatgagtgtgatgatctt
gttacgtatttggaatcattgtataaagccaatccatctccagtcaaattagcaacacct
tcacattcaaaagaaagcatgcctaacacagatgcaggcataatgctgacaccaaagatg
ggtaattctctaatagaaggaattattgaaaaaagagtcagaaggtgtatagatctctca
ccagtgaaaaatgtatcaatttccagtaataaaagaaatgatgatctaacagcagagcct
gtactgcatcccagtgactctccagagttgatggtaatgagtagtgatccagaaaaggat
gttggaaaaggtagctctcagtccccagatctctttaatgaatcttgtgtaactgataat
acagctcgtaaaacatttccctctgggtcaacaccagtgctcactggctttcatcattct
ccatgggataaagctttgcaagatatacatgaagagtcaagtttgagactcagtgtggag
tcaaaaacttcacctacgaaacctgtttcctctactagatcatcagataacttcaagagt
aataagctagacacatcatcttcagcttctccagatcttagtaaaatgaagcaggtaact
gatatagggaatttaggagaagaaagtcagggccaaaatttgagaagcaatgaaaatgta
aaagacaaggatgtaaatgactgccctgaagatgaagagactgatataattgatctgaca
gtatgcagttcagggagttctaattcagttggtacaaaggctgataatttgactgcacca
agtgttcaagttgatgctcccacagattcagaaacagaagaaatggagccattaatgctg
gctgatggaacagacaccaattcagaagacaatggagaatgtcctgaagagccttgtatg
gctgttgtaaatatcatgcaagcaacaccaaataagagcctggacacaaattatgagaaa
caagaagagagcatgaatagatcttacatcagtactgtatgggatgactttgatgacata
ggatgtgagttattgcctattgaagtttctcctgcaaccccagttaaagcagtggttact
ccagctgttaaaggacattaccaagataaagaatttagtgtgtcctatgatatggacagc
gtttctccaattcagagtaattcgcccacaaaagcagaagaagatacatcaggtgtaatg
cagaaaagaaaatggactccagtgaagcaaatgtcttctaaaacagttgattgtgaaggt
agtaaagacagacctatttccaatttgcagagcagactgggaagcagtgcacctgatgct
gttgtagcttcaggatcatcattctctgatgagactttattgcaagtagcaacagagttt
gaggacagtaatatttggaaggacgactttgactcaattgatgatgtctccgatccttta
cttcagaaagatgcagaaaaaaaaaaatcaaaatctaagaaagatcttttaaaaacacca
aatgataagattagtctctgtaaaaagcctataacaccaatgccagactacaagaacatg
ccctctcctgatttaaagaaagagctagagaagtatggaattcgtcctataagtcgccgg
aaagccacaatacttctccagcatgtttatgaacagactcatcctctggttacagatagc
gaggcagagtctagtttctgtgaaacgccacagcggcaaccacctgagaaaaacaagaaa
ggtgtatcaacacttcaccagaaagtcttggcaaagaaggcagcacttcaaaagaacaag
aaagagagacctaataacaaaagaaaaaatgcaggttcacaggcacagccaaatttatct
gcaaaacaaagaggtgacaaggaagaggaagaagactgtgatcaactcaattcttcgcag
acatcaaccaccagcactgatggatcagaatttgactgtgctgaagaatcaatgatggtg
ggcattggtgatgatgatgatgtgttaacctctacccagcaagttgatattggcagtaaa
gtggcaaagttcattaagtgtgatccagaactgtatatgaaaatacttttgtatgaaccc
atctttgttgaagatttacaagcatcactaaaagcaaatggaatcaaaacaaacatgaat
aatcttcttgaaatactagatgaacagtgcatcacattccgaactcagcaaggacaaagg
aacagatcaaggaaaaggaagtcaccgaagaagaagaatgctggctccccaaccaagtca
cccaaaaagaattcttga
DBGET
integrated database retrieval system
