Penaeus chinensis (fleshy prawn): 125044282
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Entry
125044282 CDS
T08118
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04136
Autophagy - other
pchn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125044282
04136 Autophagy - other
125044282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125044282
03029 Mitochondrial biogenesis [BR:
pchn03029
]
125044282
Membrane trafficking [BR:
pchn04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
125044282
Others
Specific organelles associated proteins
Auto phagosome
125044282
Mitochondrial biogenesis [BR:
pchn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125044282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_SCAP
eIF2A
Beta-prop_DCAF4
Beta-prop_HPS5
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_SPT8
Cytochrom_D1
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125044282
NCBI-ProteinID:
XP_047496827
LinkDB
All DBs
Position
35:complement(6137423..6148984)
Genome browser
AA seq
564 aa
AA seq
DB search
MALCWNKASEGHWRHRIYQKLRERNKKEYENINDLIQLHNRLFEQSELLRTENLQLTLQN
EKLRQENSDLHSKGAGGDGGSGAGSAAAGASSQVVQALEQKLYKLQEELTDLHRRKGENA
QQLVELNQCLQERDKLLATKENKLAEYESEILILKEELAAKESALADLQAVNQVLRDEYQ
TLNLAFTALEDKYRKAQEENRELIDRWMAQKAKDAEKLNLENDTALKKRQMMLEEQLKEA
AREPKQVSLESKFACSPPICLTAVLPAKAYLRFDAHDGEVNSVCFSPQGKIVATGGADRK
LKLWDISRATVEARGVLTGSNAGVTAIDFDAEESLILGASNDFASRVWTVMDHRLRHTLT
GHSGKVMAAKFLSESSKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVPSDSAATTI
ISGHFDKKIRFWDTRTEQSANEVPLQGKITSLCLSRDGFYLLSCVRDDSLKILDLRKNQV
VNTFTCEGFHVGADYSRAVFSPDATYVAAGSGDGSVYIWNVSTGKLEKTLREHVACVVAC
SWHPNGKSLVSCDRAKKVVAWSDF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgctggaataaagcctccgagggccactggaggcacaggatataccagaaa
ctacgcgaaaggaataaaaaggagtatgagaatattaacgacctcatccagttgcataat
cggctctttgagcagagtgaattattgagaacagagaacctacagctaacacttcaaaat
gagaaacttcgtcaggagaactcagacttacacagtaaaggagctggaggggatgggggc
agtggagccggttctgctgctgcgggtgcctcctcgcaagtggttcaggcgctggaacag
aaattgtataagctacaagaagaattaactgacctccacagacgaaagggtgaaaatgcc
cagcagctggtggagttaaaccagtgccttcaggaacgtgacaaattactagcaaccaaa
gaaaataaattagctgagtatgaatcagagatcctgattctcaaagaggaattagcagct
aaagaatcagcacttgcagatctccaggcagtcaaccaggtcctgcgagatgaataccag
acgcttaacttagccttcactgccttggaagacaagtatagaaaagcacaggaagagaac
cgagagttaattgaccgttggatggcccagaaggcaaaggatgcagagaagttgaacctg
gagaatgacacagcactgaagaaacgccagatgatgctcgaggagcaactaaaagaagca
gcaagagaaccaaagcaagttagcttagaaagcaagtttgcgtgtagcccacctatatgt
cttacagccgtcctacctgcaaaggcttaccttagatttgatgctcacgatggggaagtt
aattccgtctgctttagtcctcagggaaaaattgtagctactggaggcgctgatagaaag
ctcaaactctgggacattagtcgtgccacagttgaagcgagaggagtccttaccggcagc
aatgcaggtgtgacagccatagactttgatgccgaagaatcgcttatattaggtgcctcc
aatgactttgcgagccgagtctggactgtcatggatcacagattaagacacaccctaaca
gggcattcgggcaaagtcatggcagccaaatttctgtccgagtcgtccaaggttgtgacg
ggatcccatgaccgcaccctcaagatatgggacctgagaagccgggcatgtattagaaca
atcttcgctgggtcgagctgcaacgaccttgtcccctcagacagcgcagcaacgactatt
atttcgggtcactttgacaagaaaatccgtttctgggacactcggacggaacaatcagcc
aatgaggtgcctctacaggggaagataacatcactttgtctatccagagatggattttac
ctcctaagttgtgttcgcgatgattccttgaaaattctagacttgcggaaaaatcaagta
gtcaacacattcacttgtgaaggcttccacgtcggtgctgactactcacgcgccgtgttc
tcccccgatgcgacgtacgtggcagcaggaagtggcgacggctctgtctacatctggaat
gtcagtacaggcaagcttgagaagacactcagggaacatgtagcttgtgttgtggcgtgc
agttggcacccgaacggcaagtcactagtgtcgtgtgaccgggccaagaaagtggtggca
tggtcggacttttag
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integrated database retrieval system
