KEGG   Penaeus chinensis (fleshy prawn): 125044695
Entry
125044695         CDS       T08118                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125044695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchn03041]
    125044695
   03036 Chromosome and associated proteins [BR:pchn03036]
    125044695
Spliceosome [BR:pchn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125044695
 Complex B
    125044695
 Complex C
   U2 SnRNP specific factors
    125044695
Chromosome and associated proteins [BR:pchn03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    125044695
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N UME DUF2298
Other DBs
NCBI-GeneID: 125044695
NCBI-ProteinID: XP_047497528
LinkDB
Position
1:31579847..31606245
AA seq 1322 aa
MAARKFTTEDIEAHIQDIQNRKASLKPPPPPEGSAKDDERVMLDGGGYYDRDIYDISNGN
KYANYVQSIGVDDIDDDEDDGGTTLGKKGGGGTYTAPRLFLNEMVDKDHDPMAQYKRPTI
ADREDNYRARRQMQVISPERNDPFADGGKTPDMNARTYAHIMQETRLKGEEALIRKTIQE
RAKEGTLQAVATNGDAPKAAPRKRGRWDQTADETPQPKKKTTWEAETPSVARWDETPGRA
KGSETPGATPGQSTRMWDATPGHATPGHETPVHDKATPSARRNRWDETPKTDRGETPGHN
SGWAETPRTDRGASDLIQETPTPSASKRRSRWDETPAAQTPGATPSGAMTPSTPHTPSMT
PGMMTPGGITPGGTTPVGPKAIGMATPSPGQLVNMTPEQIHAFRWEREIDERNRPMTDEE
LDALFPPGYEVLPPPQGYVPIRTPARKLTATPTPMIGTPQGFYMQKEGMTPKHDDSQPKG
NLPLLKPEDAQYFDKLLQDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDK
AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIP
SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVR
TITALALAALAEAATPYGIESFDSVLKPLWRGIRQHRGKGLAAFLKAIGYLIPLMDGEYA
DYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPGYIKEEILPHFFKHFWNHR
MALDRRNYRQLVDTTVEIANKVGASEIVNRIVDDLKDENEQYRKMVMETIEKIMANLGAA
DIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNALGSRVKAYLPQICGTILWRLNN
KSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKGIVN
VIGMHKMNPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSPREWMRICFEL
LELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET
CSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTSLLEDALMDRDL
VHRQTACAAIKHMAIGVYGFGCEDALIHLLNYVWPNIFETSPHLVQAFMDSIEGLRVALG
PQKILQYVLQGLFHPARKVRDVYWKIYNNLYIGAQDALVAGYPRILNTGNNIYSRDELDY
IL
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggctgcccgtaaattcacaaccgaagatattgaagcacacatacaagacatccagaac
cggaaggctagcttaaagccccccccacctccagaaggttcagccaaggatgatgagcgt
gtgatgctagatggtggtggctactatgacagagacatttatgatatctctaatggaaat
aaatatgcaaattatgtccagtcaattggcgtggatgacattgatgacgatgaagatgac
ggaggaacaactcttggcaagaaaggagggggtggcacttacactgccccacggctcttc
ctcaatgagatggttgataaagatcatgaccctatggcacaatacaagcgacctacaata
gcagatagagaggataattatcgtgctcgtcgtcaaatgcaagtcatttccccagaaagg
aatgatccttttgctgatggaggcaaaacacctgacatgaatgcgcgaacctatgcacac
atcatgcaggaaacacgtctgaaaggagaagaagcccttatccggaaaacaattcaggag
agagcaaaggaaggaactcttcaagctgtggcaaccaatggtgatgcaccaaaagctgct
ccaagaaagcgaggccgttgggatcagacagctgatgaaacaccacaaccaaagaaaaag
acaacatgggaagccgaaactccttctgttgctcgttgggatgagactccaggtcgagcc
aaaggaagtgagacacctggtgccacaccaggacagagcactcgtatgtgggatgccaca
ccaggccatgcaacacctggccatgaaacacctgttcatgacaaggctactccttcagct
cgacgaaatcggtgggatgagacgccaaaaacagatcgtggagaaactcctggacataac
agtggctgggctgaaacccctcgaactgaccgtggagctagtgacctcatacaagaaacc
ccaactccaagtgccagcaagcggcgctcaagatgggatgaaactccagccgcacaaact
cctggtgccactccatcaggagctatgaccccatcaacaccccacacacctagtatgact
ccaggaatgatgactcctgggggtataactcctggaggtacaacacctgttgggccaaag
gctattggtatggctactccatcaccaggacagttggtaaatatgacaccagaacagatt
catgctttcaggtgggaaagggaaattgatgagaggaataggcccatgacagatgaagaa
cttgatgctctatttcctcctgggtatgaagtgctaccaccacctcagggttatgttcct
ataagaacacctgcacgtaaattaacagctactccaacaccaatgataggaacccctcaa
ggattctacatgcagaaggagggcatgacgccaaagcatgacgactcacagcccaaaggt
aatttgcccttactgaaacctgaagatgcccagtacttcgataaacttctgcaagatgtt
gatgaggagagcctaagcccagaagagcaaaaggaaaggaaaataatgaaattgcttctc
aaaataaagaatggaactcctccaatgcgcaaagcagcactacgccagattacagataaa
gcaagagagtttggtgcagggcctctctttaaccagatccttcccttgctaatgtcccca
acactggaggatcaagaacgacatcttttggtcaaagttattgacagagttctctacaaa
cttgatgacctggtacgcccttatgttcataagattcttgtggtcattgaacctctactt
attgatgaagattattatgctcgtgtagaaggtagagagatcattagtaatttggccaaa
gctgctggattagcaaccatgatttccacaatgagacctgatattgataacattgatgaa
tacgtgcgtaacactactgcccgagcctttgctgttgtggcttctgcccttggcattcca
tctttgctaccatttttaaaggctgtctgtaagagcaaaaagtcatggcaggcacggcat
actggtattaaaattgtacagcagattgccatcttgatgggttgtgcaattttgccacat
ctccgttcccttgttgaaattattgaacatggacttgttgatgagcaacagaaggtgaga
actatcactgcccttgccttggctgcactggcagaagcagcaacaccttatggtattgag
agttttgattctgttttgaagcctctgtggcgtggtatccgacaacaccgtggcaagggt
cttgctgcctttttgaaagctattggttatctgatcccacttatggatggagagtatgct
gactactatacaagggaagtgatgttgatcctcattcgagaattccaaagtcctgatgaa
gaaatgaagaagattgtgttgaaggtggtcaaacagtgttgtgccacagatggtgttgaa
ccaggatatattaaggaggagatcctgccccacttcttcaagcacttttggaaccacaga
atggctctcgataggcgaaactaccgccagctagtcgatacaactgttgagattgcaaat
aaagttggggcatctgagattgttaaccgtattgtagatgatttaaaggatgaaaatgag
cagtaccgtaaaatggtaatggaaacaattgaaaagattatggctaacttaggtgcagca
gacattgattctcgactcgaagaacagttgattgacggtattctttatgcattccaggag
cagactacagaagatgttgttatgctcaatggatttggtaccattgttaatgctcttgga
tcacgtgtcaaggcttatcttcctcaaatttgtggtactatattgtggcgcctgaataat
aaatcggccaaagttcgtcaacaagctgcagatctgatatctcgcattgcagtagtaatg
aaaacatgtcaggaagagaaactgatgggacatttgggtgttgtgctgtatgaatatctt
ggtgaagaatatccagaagttcttgggtccattcttggtgctttgaaaggtattgtgaat
gttattggaatgcacaaaatgaaccctcccatcaaagatcttctcccacgtcttactccc
attctgaagaacagacatgaaaaggtacaagaaaattgtattgacttggtaggacgcatt
gccgacagaggaccagagtatgtgagtcctcgtgaatggatgagaatttgctttgaattg
ttagaacttcttaaagcacacaaaaaagccatcagaagagcaacggtaaacacatttggt
tatattgccaaagctattggtcctcacgatgtgcttgctacattactaaataaccttaag
gttcaagagcgacaaaatcgagtgtgtacaacagtggctattgctatagtcgctgaaaca
tgttccccatttacagttctcccaggtcttatgaatgaatacagagttcctgaactgaat
gtccaaaatggagttctgaagtccctttctttcctttttgaatacattggtgaaatgggg
aaagattatatttatgctgtcacatcacttctggaagatgctctcatggacagagattta
gtgcacaggcagactgcatgtgcagccatcaaacatatggccattggcgtttatggtttt
ggttgcgaagatgcattgattcacttgttgaattatgtatggccaaatatttttgagaca
tcacctcatctggtccaagctttcatggacagcattgagggactcagggtggccctagga
ccacagaagattcttcagtatgtgttgcaggggcttttccacccagcaagaaaagtacga
gatgtgtattggaaaatttacaacaatttgtatattggcgctcaagatgctcttgttgca
gggtatccacggatattaaatacaggcaacaacatatactccagggatgagcttgattat
atcttgtag

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