Penaeus chinensis (fleshy prawn): 125044774
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Entry
125044774 CDS
T08118
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03082
ATP-dependent chromatin remodeling
pchn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125044774
03083 Polycomb repressive complex
125044774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125044774
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125044774
Histone modification proteins
HAT complexes
HATB complex
125044774
HDAC complexes
Sin3A-HDAC complex
125044774
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125044774
PRC2.2
125044774
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125044774
Heterochromatin formation proteins
Other heterochromatin formation proteins
125044774
Chromatin remodeling factors
NuRD complex
125044774
NuRF complex
125044774
NuRF complex (fruit fly)
125044774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125044774
NCBI-ProteinID:
XP_047497661
LinkDB
All DBs
Position
36:34067695..34078299
Genome browser
AA seq
461 aa
AA seq
DB search
MTDKEAAKVGDGGGPAPVCAVPDLPTTVAVAEVTPVTRLQDTFDDAVEERVINEEYKIWK
KNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLILGTHTSDEQNHLLIASVQ
LPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP
SSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW
DINATPKENRIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTNKP
SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEVFQVQW
SPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN
EPWVICSVSEDNIMQVWQMAENIYNDEEPETPASELESAAS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaggaagccgccaaggtaggggatggtggtgggcctgcgcctgtgtgtgcg
gttcccgacctcccgacgacagtggcggtggctgaggttacacctgtgacccgcctgcaa
gatacctttgatgatgcagtagaggagagagtcatcaatgaggagtacaagatatggaag
aaaaacaccccctttctgtacgacctggtgatgacccatgccttggaatggccctccctc
actgcccagtggttgcctgatgttacaagacctgatggcaaagacttcagcattcaccga
ctgatactaggaacacacacaagtgatgaacagaaccatctcctcattgcctcagttcag
ctcccaaatgaagacgcccagtttgatgcctctcactatgacaacgaaaaaggagagttt
ggtggctttggctcagtcagtggaaagattgaaattgaaattaaaatcaaccatgaggga
gaagtaaaccgtgctcgctacatgcctcagaatccatgcgtcatagccaccaaaacccct
tcaagtgatgtgcttgtctttgactacacaaaacatccatcaaaaccagatccatctggg
gagtgccatcctgacctaaggttacgtggccatcagaaggaaggatatggtctgtcttgg
aatcctaatctgaatgggtatctcctgagcgcatcagatgatcacactatctgcttgtgg
gacattaatgcaactccaaaggaaaacagaataattgatgcaaaaacaatattcacagga
cacactgctgtagtggaggatgtcgcctggcacctcttgcacgagtccctctttggttct
gtggctgacgatcaaaagctcatgatctgggacactcgtgcaaataacaccaacaagccc
tcacacacagttgatgcccatacagcggaggtgaactgcctctccttcaatccttactct
gaatttattcttgccactggaagtgcagacaagacagttgccttgtgggacctgcgcaac
ctcaagctgaaactccattcatttgagtcgcacaaagatgaggtcttccaggttcaatgg
tcacctcacaacgagacgattctggcaagttcaggcacagaccgtcgcttgcatgtgtgg
gatctgagcaagattggtgaggagcagagtgctgaggatgctgaagatggaccacctgaa
ttattgttcatccacggaggccacactgccaagatctccgacttctcctggaaccccaac
gaaccatgggttatttgctctgttagtgaagacaatatcatgcaggtgtggcaaatggca
gaaaacatctacaatgatgaagaaccagaaactccagcctctgagcttgagtctgcagca
tcttaa
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