Penaeus chinensis (fleshy prawn): 125044990
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Entry
125044990 CDS
T08118
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125044990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchn03036
]
125044990
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125044990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
125044990
NCBI-ProteinID:
XP_047497952
LinkDB
All DBs
Position
36:complement(10956813..10976008)
Genome browser
AA seq
1045 aa
AA seq
DB search
MEVIESLINKADYLIEQSHEMLVQGGSASIQAQPLFRKLAAIYAEEAIKTPKLKSISLTH
KLLEKLVKRESLNCLVVNLYRGNEGYSLAIKMSSGLETETVRLSYEEDDFLSYIDNEKLP
PMLLDLLDESNIEIYYSGCVIAEIRDYRRTLDSSYDTRYVLLQPTSQSLAADIAAMTRDR
DWTPEEKLHLEAEIVKRTAPPLNLSPSPMVAIINNKLHQRKYKFSTVPIKRAARRFSQIA
QNRQKKSEEAPAPKCLRLHNFLSGKKDKRPIAKAITKPLIPMAMDEAPDLTVPENIDVSK
VARTYERPNYTTDNSLVFIEELVLETERGQGRIYHTKLTISQRKTDEVYFGELYVDRDYQ
EGKQNGSTCKFPLGTQQQVCRYIQQFKEIFTEDWRKSVKITHRVAGQAALSTFMPGTYKK
DIADSLKQSAAQQPGQQQIQVQAQQQPQQTQQQPQQQQPIQQQAAAAVAAAAVAAAGGPT
GVVPVSIATTLAQHTQPNVIIVSNGEGVKKSVTVVTKPITVSSASTLTSLISAQPVQQAA
GPQQQVVVGRSVNLTNFLSGRATATAAGVVGMTGGITGSAKLAVAVTTGPGASKISLPSL
QTQLNRPVPAYSQAVSLPKTQISSPSLTALLKGTVPANSQTVSIAKPQVVSLVGGVSDST
GHTKTVANTESSSSSTGSMSGLEALLAGTPSADNPAPQRGGPSLLERLSAQTSGSITAPA
AVSKDSGIVKVGSGVGAPSSQTNVGSSAAAAVLRSDSGSGGPPPNINIASLNLPGLNVAG
LQSLTANLGGLQNVQVSIPGLAVPISLSLNVPVTSSTGVILSSPPPSSVATKVSGSTAVT
SAATVMIASQPTLQQGQVVQLPIGQLSSSQLAAQLTKSSTQQGGSSSTIPVLQLQGVGGP
LFTPVRGGGAVSSAGGGVTSAGNSLTQQTVQVALPAGQGTGTVVSGGDTNLGVAHTTTVC
ATQASVVSLTAKQQLQLALQKSGPLSISQLQLQQKLAALAKRQQHQLQNHQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaggttatagaatctttaattaataaggccgattatttaatagaacaaagtcatgag
atgctggttcagggtggaagtgcttccattcaagcacagccactcttcaggaagctagct
gcaatttatgctgaagaagcaatcaaaacaccaaagctgaagagcatcagtttgacacac
aagcttcttgaaaaactagtgaaaagagaaagtttgaattgcctggttgtaaatctttac
cgaggtaatgagggctattctcttgccattaagatgtcttctggactggagactgaaact
gtacgattgtcatatgaagaggatgattttcttagttatatcgataatgaaaaattaccc
ccaatgttattagatctattggatgaatccaatattgaaatttattattctggttgtgtt
attgctgaaataagagattacaggagaactctggactcttcatatgatactagatatgtt
cttttacaaccaacaagtcagtcgttggcagcagacattgcagcgatgacgcgagaccgt
gactggaccccagaggaaaaactgcatcttgaagctgaaattgtaaagcgcactgcccct
cccctaaatctctctccatcacccatggtggctattataaataataaacttcatcagcgt
aaatacaaattctcaacagtccctattaaaagagcagctagaagatttagtcagattgca
cagaatcgtcagaagaaatctgaagaagctccagcaccaaaatgtctaagattacataat
ttcctcagtgggaaaaaggacaaaagacccattgccaaagcaataacaaagcctcttatt
ccaatggccatggatgaagctccagatttaactgttccagaaaatatagatgtttcaaaa
gtggcacgtacatatgaacgaccaaattatacaacagataactctcttgtattcattgag
gaattggtgcttgagactgaaagaggacagggaaggatctaccacacaaagctgacaata
tctcaaaggaagacagatgaggtgtattttggcgaattgtatgttgaccgtgattaccag
gagggaaagcaaaatggatccacatgcaaatttccattgggaacccagcagcaggtgtgt
cgatacattcagcagttcaaagaaatatttactgaagactggaggaagagtgttaaaata
acacatagggtggcaggacaagcagcactctccacattcatgcctgggacctacaaaaag
gatatagctgactctcttaaacaatctgctgcacagcaacctggccagcagcagattcaa
gtgcaagcacaacaacagcctcaacaaacacagcagcaaccacaacaacaacaaccaata
caacagcaggcagcagctgcagtagctgcagcagctgtagcagctgcaggaggacctaca
ggagttgttcctgtttccattgctaccacactggctcagcacacacagcctaatgtcatt
attgtttcaaatggtgaaggtgtcaaaaagtctgtcacagttgtaacaaaacctataact
gtgtcatcggcatcaacacttaccagccttatatcggctcagcctgtccaacaagctgca
ggcccacagcaacaagtggtagttgggcgcagtgtaaacctaacaaacttcctgagtgga
cgagcaacagccaccgcagctggagtagtgggtatgacaggaggcatcactggatcagct
aaattagcagttgctgttacaacaggtccaggggcatcaaaaatctctctcccatcctta
caaacccaactaaatcgtccagttccagcatattcgcaggcagtgtccttacccaaaact
cagatctcatcgccttccctgacggcacttctgaagggcactgtgccagcaaactctcag
acggtctccatagcaaaaccacaggttgtgagcctagttggtggtgtaagtgactctaca
ggacatactaagactgtggccaatactgagtcctcttcctcctccactggcagcatgtct
ggtctggaagcattacttgcaggaaccccatcagctgataatcctgccccacagagaggt
ggtccatcacttctggaacgtctctctgctcaaacctctggttctatcactgctcctgca
gcagtaagtaaggacagtggcattgtgaaggttggcagtggtgtaggggcaccatcaagt
cagactaatgttggcagttctgcagcagcagcagttctgcgaagtgacagtggcagtggt
ggtcctcctcccaacatcaatattgccagtctcaaccttcctggcctcaatgtagcagga
ctgcagagtctcacagcaaacttaggtggactacaaaatgtacaagtctcaatcccaggc
cttgctgttccaatttcactctctttaaatgttcctgtcacaagttctactggtgtgata
ttatcatcaccaccaccttcaagtgtagcaacaaaggtttcaggttcaactgcagtaaca
tcagctgcaacagtaatgattgcaagccagccaactcttcagcaagggcaagttgtacaa
ctaccaataggccagttgagttcttctcagttagcagcacagttaactaagtcaagcacg
cagcagggtgggtcttcttcaactatacctgtattgcagctgcagggcgttgggggcccc
ttgttcaccccggtacgaggaggaggtgctgtgagtagtgcaggaggaggggtaacatct
gctggaaactctctcacacagcagacagtgcaggttgctctcccagcaggacaggggact
gggaccgtggtgtcaggtggtgatacgaacctaggtgtagcgcacacaacgactgtatgt
gctactcaggcatctgttgttagtttaactgcaaaacagcagctccagctagcattgcag
aaatcaggtcctctcagcatttcacaactacagttgcaacaaaagttagcagcacttgcc
aaacgtcaacaacatcagttgcaaaaccatcagcagcaacagcagcaacaacagcagcag
caacagcagcagcaacaacagcaacaacaacaacagcaacaacaacaacagcaacaacaa
caacaacagcagcagtag
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integrated database retrieval system
