Penaeus chinensis (fleshy prawn): 125044997
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Entry
125044997 CDS
T08118
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchn03009
]
125044997
Enzymes [BR:
pchn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125044997
Ribosome biogenesis [BR:
pchn03009
]
Eukaryotic type
Pre-60S particles
Helicases
125044997
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125044997
NCBI-ProteinID:
XP_047497966
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Position
3:complement(225519..265587)
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AA seq
592 aa
AA seq
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MDSEQESAEEPSPPSGRHTWGDRCKQTATMDKSQKMSEVKQEDDENTLQFHEMGLDDRIL
EAIARLRWGEPTLIQEKAIPYVLEGKDVLAKARTGSGKTGAFVIPTIHKILEWKRSATEQ
MVQAIMLAPSKELCKQIKENLTQLTTLCKREVRFIDVSPTVPLEAQRPLLVDKPDIVIGT
PMRILAHLNEGNLMVKDSLKMLVIDEADLMFAFDHVKEIQEILKKFPKIFQSFVTSATMF
DDVKKLKTLILHNPVILRLEEPPLPTAEQLTQYVIKLSAFDKVVLVNALFRLNMIRGKTI
IFVNSVDKGYRLRMYLAHFDISSCVLNSEMPVASRCHIIEQFNSGKYDIIIASDEHNLEA
STAGTSQGGTSKRQRNKDKESGVSRGIDFQFVSNIINFDFPLNVDSYIHRVGRTARGTNQ
GTALSLVAKADEDRFKEVETRLKALMPDTGPIFKDFKFDITQLDGFRYRSIDAWKRCTSI
AVKETRKKEIRQELLNTSKLKTFFEDNPRDLEVLRHDVPKHGLKPMTHLKNVPEYNIPDP
LRTVSKGGKRLKFNKNIPKAKLKKMSNTHRKFQEKKSNPLKSMEFTGFKKRK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggactcagagcaggagagcgcagaagaaccgtcgcctccgtcgggccgccacacgtgg
ggcgacagatgtaaacaaacggccaccatggacaagtctcaaaagatgagtgaagttaaa
caagaagatgatgaaaatactctacagtttcatgaaatgggcctcgacgacaggattctg
gaggcaattgcaaggctgagatggggtgaaccaactttgattcaggagaaggccattccg
tatgtactcgaggggaaggatgtccttgctaaggctcgcacgggctctggcaagacaggg
gccttcgtcataccaacaatccacaagattttggagtggaagcgttcagccacagaacag
atggtacaagctattatgcttgctccaagcaaagaactgtgcaagcagatcaaagaaaac
ctgactcagttaaccacattgtgcaaacgagaagttcgcttcatagatgtgtctcccaca
gtcccacttgaggctcaacgtccccttcttgttgataagcctgacattgtgattggaact
ccaatgagaattcttgcccacctgaatgaagggaaccttatggtcaaggattctctgaag
atgctggtgatagacgaggctgacctcatgttcgcttttgaccacgtgaaagaaattcag
gaaatactcaagaaattcccaaagatcttccagtcatttgtaacgagtgcaaccatgttt
gatgatgtgaagaagctaaagaccctcatcctgcataatcctgtcattctgaggctggag
gaaccgcccttaccgactgcagaacaactcacgcagtatgtcattaagctgtctgcattt
gacaaagttgttcttgtcaatgcacttttccgtctgaatatgatccgaggcaagaccatc
atctttgtcaatagtgttgacaagggatacaggctgagaatgtacctggctcactttgac
attagctcatgtgtactgaactcagaaatgcctgtcgcctcccgatgccacatcatagag
cagttcaatagtggcaagtacgacattatcattgcctcagatgagcacaatttagaagca
tcaacagcaggaacgagccaaggtggaacaagtaaaaggcagcgcaacaaagacaaggaa
tcaggagtgtcaagaggcattgacttccagtttgtgtctaacatcatcaactttgacttt
cccctgaatgtggacagctacatccaccgagttggcaggacagcccgaggtaccaaccaa
ggaacagccttatctcttgtggctaaggctgacgaagaccggttcaaggaggttgagacc
aggctcaaggctctcatgcccgacactggccccatattcaaagacttcaagtttgacatc
acacagctggatggctttaggtacagatcaattgatgcttggaaacgctgcacctctatt
gctgtgaaggagacgaggaagaaggagataaggcaagagttactgaacacttccaaacta
aagacattctttgaagacaaccccagggatctagaagttctgcgccatgatgtgcccaag
cacggcctgaagccaatgacccatctgaagaatgtaccagaatacaatatccctgaccct
ctgcgaactgtatccaaaggtggcaaaaggctgaagttcaacaaaaacattcccaaggca
aaattgaaaaaaatgtcaaatacacacagaaaatttcaggagaagaaaagcaaccctcta
aagagtatggagtttactggatttaagaaaaggaagtga
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