Penaeus chinensis (fleshy prawn): 125045118
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Entry
125045118 CDS
T08118
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03030
DNA replication
pchn03410
Base excision repair
pchn03420
Nucleotide excision repair
pchn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125045118
03410 Base excision repair
125045118
03420 Nucleotide excision repair
125045118
03430 Mismatch repair
125045118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchn03032
]
125045118
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125045118
DNA replication proteins [BR:
pchn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125045118
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125045118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
PTCB-BRCT
Rad17
AAA_30
nSTAND3
RuvB_N
AAA_14
AAA_33
AAA_17
BRCT_2
AAA_19
AAA_16
AAA_18
RNA_helicase
AAA_assoc_2
SKI
Motif
Other DBs
NCBI-GeneID:
125045118
NCBI-ProteinID:
XP_047498187
LinkDB
All DBs
Position
36:25286386..25309863
Genome browser
AA seq
1073 aa
AA seq
DB search
MDIRNYFARAGAKKPEKPSTQGKEGKRKAVVIDSDEEDPLPSSNKKRVLASDSDDDIFCV
TKNKKHIKKEEPAALPKPTTPKLKPVAPSDFFGTSPLVRKEDRKPSLKRKKSRDSNIDDN
SDDDFEKTLEQLDKQQQHASKRPKQETKSPSANETKPKPNENSPPNKDSPKGGLASKLSA
KLKESTDIKTIKEEKTTPQKDGGQKDKEKLHSHEKKKKYKAEKHEDIQSPNVKKEKRTPE
KDKNVIAEKKEKISPKKEKITPKKEKGNPSDTEALSEVKKKTPKKSETSESEEVGSTPQT
EEKKKNSKAAYLKFLQRSGPSNPGSKEIPQGEPDCLQGLVFVLSGVYESLDREEASELIK
RHGGKVTTSVSRNTSYLVIGNEAGESKIKKAEQLGTKRLDEDGLLDLIRTRPGKGSNEKT
SKEETPSKLKAFAKESKGSTLEKSLVSSPVSKNPASKSAASASKTPSPGRPLSQNTPKSQ
ASCSPSSTSSSPKTQPLSSQELSGKSGETLMWVDKYKPASLKNIIGQQSEKSNVKKLLFW
LQNWHKKQSGDKKLQRPSPWAKDDNGAFFKAALLSGPPGVGKTTTAHMVCKEAGFDFIEL
NASDARSKRTLDEVVSELLSNKTLAGFTKSKGQSSTSAKHALVMDEVDGMSGNEDRGGVQ
ELITLIKKSKIPIITMCNDRNHPKIRSLANHCFDLRFYKPRIEQIRGPMMSICFREGIQI
KPDALDQIIIGSNQDIRQILHHLSMWSANEKNLQVDDMKREAQKAKKDMKMGPWDVCKKV
FSEADHKTMSLYDKSDLFFHDYSIAPLFVQENYPKAAPHVARGNRRTTLEQLAKTASSLA
DGDLVEKAIRSKNAWSLLPTQAMFSSVLPGEYMSGHLAGQIEFPRWLGNNSRRNKFDRIM
QELQMHMRLKVSGTKLDVGMDYCGPLRNTVINPLIHHGQDGVQDAVKVMTTYDLLREDLE
SLLELSQWPGSKDPMSRVDSKVKAAFTRLYNKESQPSPYAAVQISKKKGNRGDDMDDEEE
MEEDEEDNDVASDAMIKVKKGGQKKVTDASKVKGKGLPSSRGGSGRGRGRGKK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggatattagaaattattttgcccgagctggggcaaagaagccagagaagccatccact
caagggaaagagggcaaaagaaaagctgttgtcatagactcagatgaggaagatcccctt
ccttcctccaataagaagagagttttagcttctgactctgatgatgatatcttctgtgtg
actaaaaataaaaaacacatcaagaaagaagagccagcagcattacccaaaccaaccaca
ccaaaattaaaacctgtggctccttcagatttttttggaacttcaccattggtcagaaaa
gaggacaggaaaccatcattaaaaagaaaaaaaagcagagacagcaatatagatgataac
agtgatgatgactttgagaaaactctggagcagcttgacaagcagcagcagcatgcatcc
aagagaccaaaacaggagaccaagtctccctcagcgaatgagacaaagccaaagccaaat
gaaaatagccctccaaataaggacagtccaaagggaggtctagcaagtaaattgtcagct
aaactaaaagagagcactgacataaaaacaataaaggaagaaaaaacaacaccacaaaaa
gatggcggacaaaaagataaggaaaaattgcatagccatgaaaagaaaaagaaatacaaa
gctgagaagcatgaagatatacaatctccaaatgttaagaaggaaaaaagaacccctgag
aaggataagaatgtaattgcagagaaaaaggagaaaataagtcccaagaaggagaaaatt
acacctaaaaaagagaaaggcaatccatcagacacagaagcattatcagaagtaaaaaag
aaaacccctaaaaagagtgagacaagtgaaagtgaagaagttggatccaccccccagaca
gaggaaaagaagaaaaattcaaaggcagcttatcttaagtttttgcagagatctgggccc
agtaatccaggcagcaaagagattcctcagggggagccagactgtctgcagggccttgtg
tttgtgcttagtggtgtatatgaaagcctggatagggaggaagcctcagagttaattaaa
agacatggtggcaaagtcacaacgtctgtcagccgcaatacatcctatcttgtcataggt
aatgaagctggggaaagcaaaataaaaaaggcagaacaattaggcacaaaacgcttggat
gaagatggattattagaccttattcgtacacgcccaggaaaaggatctaatgagaaaact
tccaaggaagaaacacctagcaaacttaaagcatttgcaaaagaaagcaaaggaagcaca
cttgagaaatctttggtaagcagtccagtgtccaagaacccagcttctaaatctgcggca
agtgcatctaaaacacccagtccagggaggccactctctcagaacacccctaaatcacag
gcaagttgcagtccatcctctactagctcatccccaaagactcaaccattatcttctcaa
gagctgagtgggaaatctggggagacactcatgtgggtggacaaatataaaccagctagt
cttaagaacatcattggacagcagtcagaaaagtccaatgtgaagaaattacttttttgg
ctacaaaattggcataaaaaacagtctggggacaaaaaactacaaagaccaagtccttgg
gctaaagatgataatggtgcttttttcaaagctgcccttttatcaggccctccaggagtt
ggtaaaacaacaacagcacacatggtctgcaaagaagcaggttttgactttattgagctt
aatgcatctgatgctcgctccaagcgcactttggatgaagttgtttctgaacttctttca
aacaaaactttagctggtttcactaagagcaaaggccaaagcagtaccagtgccaaacat
gctttagtgatggatgaggtggacgggatgtctggcaatgaagacagaggtggagttcag
gagctgatcactctcataaagaaatcaaaaataccaatcattacaatgtgtaatgacagg
aatcaccctaaaattcgttcattagccaaccattgttttgacctcagattctacaaacca
aggattgagcaaattagggggccaatgatgtctatatgcttccgtgaaggtatccagatt
aaacctgatgcccttgatcagataatcataggatcaaaccaggacataaggcagatcctt
caccatctttctatgtggtccgccaatgaaaaaaatctgcaggttgatgatatgaagcga
gaagcacaaaaagccaagaaagacatgaaaatgggtccatgggatgtttgtaagaaagta
ttttctgaggctgaccacaaaacaatgagtctctatgataagtctgacctgttcttccat
gattattccattgcacccctttttgttcaagagaattatccaaaagctgctccacatgtt
gccagaggtaatcgccgcaccactttggaacaacttgctaaaactgcaagcagtcttgca
gatggagacttagtagagaaagccataaggtctaaaaatgcatggtctctccttcctact
caggcaatgttcagtagtgttttgccaggagaatatatgtctgggcatttagctggacag
attgaattcccacgatggcttggcaacaacagtcgtcgcaacaaatttgatcgcatcatg
caagaacttcagatgcacatgcggcttaaggtttccggtactaaattagatgttggaatg
gactattgtgggcctctgagaaatactgtgatcaacccgttaatccatcatggacaagat
ggtgtacaagatgctgtaaaagttatgaccacctatgacctcctgcgagaggacctagag
tccttgttagaacttagtcagtggccaggaagcaaggatcccatgagtagggttgatagc
aaggtcaaagctgccttcacacgcctctataacaaggaaagccagccaagcccatatgct
gctgtacaaatatccaaaaagaagggaaacaggggtgatgacatggatgatgaagaagaa
atggaggaagatgaagaggacaatgatgtagcttcagatgccatgattaaggtcaagaag
ggtggacaaaagaaggtgacagatgctagtaaagtaaaagggaaaggattacccagcagt
agaggaggcagtggaagagggagaggtagagggaagaagtaa
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integrated database retrieval system
