Penaeus chinensis (fleshy prawn): 125045397
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Entry
125045397 CDS
T08118
Name
(RefSeq) extracellular matrix organizing protein FRAS1-like isoform X1
KO
K23379
extracelluar matrix protein FRAS1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04512
ECM-receptor interaction
pchn04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125045397
04518 Integrin signaling
125045397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Cadherin_4
Big_9
DUF8523
Motif
Other DBs
NCBI-GeneID:
125045397
NCBI-ProteinID:
XP_047498564
LinkDB
All DBs
Position
37:2206061..2223789
Genome browser
AA seq
2921 aa
AA seq
DB search
MRPAKPAAGWPVRGQVQQGLLPSKDDGICYFNMKAPSLRILAPLVAEHNRPQIINGSIIY
VQDADTPNDRLKIILVEPPSNGVIFKVGGGKKTVMKKGHRFAVEDMHENRILYKHESNRP
LYGEMRLRVTDGHFRSSAEMVSVNVISKNQPEIATNEPLIAVRGGSQAITNKILDIRDQD
NSESVTVTVVDGPRHGHLSVRGEELVLFTLQELAEGVVMYTHDGSNVTTDMVLLQASDEH
TVVNFLFQVYIVNHEKSIPVLVKNRGAKVKEGHRVQISPQLLQAADIDSDDGNLVYALLP
MLQNPGHGKLILMIPLPPAPDGFYNDGWTQMDESHLIRPTTSFTQRDVNEGRVWYIHMDK
QGQNSLISDQLLFSVADSSHPPNILSDQAFVIQVEPSNEPSEMSPTPGVQLDITVQEGQA
VSITPQYLSFSGGKSPEHLTYTITQPLGPYDGSLFNIDSPGLELRQFTQADINDMKIIYM
PPLSDIGDEDKFFSFKFVVSDQMTGEPSGLPEQKFTIHVVPFQGSQLAFTHENPELTIQS
RDSVLLEPQFFELKNLDQSEEIVFILLEAPQHGTITQEIGGESFMFTEQDSFSRDEVLNS
RIMYTHDGSESSYDFIVILALGHSSEASSRISITIRHEDDGQPTKSENASFSMTLREGES
RVLSRLQLYFTDVHSPDEDLVYTLTSQPLYGSLTILQPTGLSQTLNQTHKFTQADILYGL
INYTSNVEIGISEVMESLVFNVTDPNNNVLSNQVLKVRIQPVDNQEPRVTVGPAVEVMEG
GSVVLPPSSVMATDADTPPTELRIIIDAPPIFGYITNTLAVPSLEPRSSPGNSSPMLEFA
VGDVIAGRVAYVQSQHRHQEPTQDTLLFHVTDGINSSPTMKMNITIQPVNDESPVILGEQ
VILEQGQTVIIRNQSLFISDTDTDPEDLIITIQQSPSHGSVHKKTSPYVSIKKSELLSRG
QKFTFRNLLDELVLYSHDGSRDPEDVMEIMVSDGNHETGGIIEFIILRKTDEAPRLRLNH
GLTLKAGEVSVISPSSLMAEDEDSDVAKIKYVVTRLPTSGSVELFEQEANTWKPLTVGSV
FMQEDILNGNVRFSHQKDTQAGTDTLHFNLQDTEGNVMMDQALSIIVLEDKYPPHITLNV
GLSLMEDASAPITADLLSAMDAEMDPMELTFMLTSGPNHGQLELATAPGKAVNTWTQGAL
ELGILRYQHQSADESPTDQFTFVVSDGYNNASQSFHINIIPVDDELPLLVLNHIKVQEGT
RKTISQFEIEALDADTKDDLIIFEVTRQPRHGRLQIKKGNKHIDAKTFSMRNLYNGDVSY
LHDGSDASRDSFKIKVSDSTNSMYMKGRGEETTQEPTTVHIEISSVDDGTPIITANTGLH
FLQHEDGKAQNIITSHELHVEDEDTPPENLKFTVVAPPSHGVLRLTTHERPVLSFTQADI
ISGHLYYELTTYSQSVTSDHFTFEVTDSKPNTVTGNAFHIQWSWFVVAQREYNVTESDGE
AKILVKRTGNLKQPSVVTCTTHTGSASGGKGRARGEDFTEVAEPIEFREGETEKYCTIPV
HDDEEFEGPEVFTVKLTDPKYALIGKPKKSVVTIFDEEDKPKVEFETSNFAVDETEGFIF
ARLRRTGDLNVPASVICLTKDGSAKGSEPNQLTSGTDFIHRNHDESSRVVFPPGVKVSTC
NVKIIDDPEFEDNEDFMIYLKDPSDGVILGETHEATVRVKGSNDDCKIKLTQTHYNVSEG
ESVVSVTLDRTGIDLNYSSSVWCATKSFQPEEAQPSLDYVPHSEQVIFPSGVQTAVCNIN
IIDDRVNPRLEGPERFVVFISTAQNASIDSSAAEAVVTIQDEEDAPSMQFTLPEIKVREN
QTVVKIPIQRTGDLSRVSTVHCFTRQRSAKAGIDFIERPNTKDSMVTFPRGVSKVECEVG
ILDDLVFEKEEEFIVKLSHPESPSHLQPTMGENRITRVSILDWEDRPRVSFQRNDYTVAE
PLAGELTSKFNVPIIRLGDVSQVTRVMVSTRDGSAASGTDYHPLHAEVEFPPGNTSIDME
LTIVHNPSRQWHETFSLVLGPEEPVNAELGTITTAAVTILDHKSSGSSVLPAPPVVTSLL
HYDNIEEHLGEPASPGYPLVCVTPCDPKYPESAKTAEMCAQAGLNASQMQYSWEVAIPAD
GDGLLMPFHSLTDDTLFASPNTKVLDSMFFARHFRVRCVAQPVRSDGVFGIPLRSKPISI
GIHNGICQTPLVPGQPGGFQSQSFIATLSYINSTDEKHPNTVKIHVEIPHQDGMVPVVST
LPVHNLRYLLTEQLYRVHHTCSNMDLTAGFLAEAPDQQPINPRPYQSDFRLREKKSLELY
QHLDLKTCMWTFSAWFSMSQLVDQCGGQVVSDFQVGSGGQSFLTVRVPLYISYVYAASPP
GWASLDHRTELSVSFYYNTLLWHQGLHTQPILTAKIQVTRISIDESGRLVIDLKTVAKFR
GQFVLQHPNLEDHTSRLVAPEDLEIQFSLELVWTASTWDGPEQVWRATSEYNLKDYTGKY
KLELIPCTVTPTQGYSDMSPPACTPHPPTTFPLPIAIQQTHRPVPLIYTLNTDFQLFNSE
TMFLMDPKDVDNLQEVDYKGSYGPGQTIYGRVMWHPSQDLHSAYKLYIQRVFLCTGAEGY
VPTYDPTGELYQEGPQYGCIQPSSKLRHRFLILDREHPYVEDGNLSIPKIEANFAEDLPE
YETLHQFSGVDGFLLKTDALYEVNSGYQWYLQVLYTIGPSSSRSRRDAPLHTVLSQFQSK
EDDLGRTLVKRTLMDPSEDYVEDEVEELPTPAFLRSLHTRNGTNMRGFQLDTGSKMDDSS
IFLNVLYVIVVLVVLLGIIIAGLLLVKRHFRKSEKDKVIVVRSLKNEREQFRRKGEGKVQ
ERPKTLPPHMTLNSESNLQTVKVKTLAITVRNNLEDEGTEV
NT seq
8766 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgccaaacctgctgcaggatggccagtgcgtggacaagtgcagcaaggatta
cttccaagcaaagacgatggcatctgttacttcaatatgaaagcaccctctctgaggatc
ttagctcccttggttgctgaacacaacagacctcagataatcaatggctctatcatatat
gtccaagatgctgacacacccaacgaccgcctgaagatcattttagtggaaccaccctct
aatggagtcattttcaaggtcgggggtggaaagaagacggtcatgaagaaggggcatcga
tttgcagtagaagacatgcatgaaaacagaattttgtataagcatgaatctaaccgtcct
ctgtatggggaaatgcgtctacgtgtgacagatggacattttcgttcaagcgctgaaatg
gtatctgtaaatgtgatctcaaaaaatcagccagagatagcgaccaatgaacctctgatt
gcggtccgtggtggcagccaggccatcaccaacaaaatactggacatccgagaccaagac
aatagtgagagtgttacagtgacagttgttgatggcccaagacatggccatctctcagtc
agaggagaagagttggttttgttcactcttcaagaattagcagaaggtgtggttatgtac
actcatgatggctctaatgtcactactgacatggtgcttctgcaggcatcagatgaacac
acagtggtaaactttctcttccaagtgtacattgtgaatcacgagaaaagcatccctgtg
ttggttaagaatcgaggtgctaaggttaaagaagggcaccgtgtccagatctcccctcag
ttactccaagctgcagatattgactcagatgatggcaacttggtctatgcccttcttccc
atgctgcaaaacccaggtcatggcaagttgattttgatgatcccattgccacctgcccca
gatggcttctacaatgatggatggacacaaatggatgagtcacaccttattcgaccaact
accagctttacccagcgtgatgtgaatgagggccgagtgtggtatattcacatggacaag
caggggcaaaacagtctcatctcagaccagttactgttctctgtggctgacagctctcac
ccgcccaacatcctctctgatcaggcctttgtcatccaggttgaaccatccaatgaaccc
tctgaaatgtctccaacaccaggtgttcagcttgatattacggtccaggaagggcaagct
gtcagcatcaccccacagtacctgtctttctcaggtggaaagtctccagaacacctgaca
tataccatcacacaacccttaggtccatatgatggctcactcttcaacatcgattcacca
ggtcttgagttaaggcaattcacacaagctgacatcaatgatatgaagataatctatatg
ccccctcttagtgacattggtgatgaggataaattcttcagcttcaaatttgtggtgagt
gaccagatgacaggagagccaagtggtttgccggaacagaagttcaccatccatgtggtc
cccttccagggctctcagttggccttcactcatgagaacccagaacttaccattcaaagt
cgtgattcagtgttgcttgaaccacagttcttcgagctgaaaaacttggatcagagtgag
gagattgtgttcatcttgctagaggcccctcagcacggtaccatcactcaggagattggt
ggagaatccttcatgtttacagaacaggacagtttcagcagagatgaagtactgaattcc
cgcataatgtacacgcacgatggatccgagtcaagttacgacttcatagtgatacttgcc
cttggccattcctctgaagccagctctaggatctctatcacaatcaggcatgaggatgac
ggtcagccaacgaagagtgaaaacgcctccttctccatgaccctgagggaaggggaatcc
agagtgcttagtaggttgcaactttacttcactgacgttcactctcctgatgaggacctt
gtatatacccttacgagccagcctctgtacggatctctcaccatcctgcagccaactgga
ttatctcaaactctcaaccaaacacacaagttcacacaagctgatatactatacggtctc
atcaactacacttcaaatgttgaaatcgggatatcggaagtcatggagagcttggtgttt
aacgtaactgaccccaataataatgtgctgagtaaccaggtgttaaaagtgaggatccag
ccagtggacaaccaggagcccagagtgactgtgggaccggcagtggaggtgatggaaggg
gggagtgttgtgcttcccccatcctctgtcatggctacagatgccgacactcctcccacg
gaacttaggatcattattgatgctcctccaatatttggatacattactaatacacttgca
gtcccttccctagagccaagaagcagtccaggaaatagctcacccatgctggaatttgcc
gtgggtgatgtcattgctggacgagtggcttacgtgcagtcccagcaccgtcatcaggaa
cccacacaagacactttactgttccatgtgaccgatggcatcaactcttctcctaccatg
aaaatgaatatcacaatacagcctgtaaatgacgagtcaccggtgattttgggagagcag
gtcatactggaacaaggccagaccgtcatcatccggaaccagtccctctttatatcagac
acggacacagacccagaggacctcataatcactatccagcagtcaccttcccatggatct
gtacacaagaagacatcaccatacgtgtccattaagaagagtgaactgcttagtcgaggc
cagaaattcaccttcagaaacctgctggatgaactggtattgtacagtcatgatggttcc
cgagacccagaagatgttatggaaatcatggtaagtgatggcaaccacgaaacaggaggc
atcatcgaattcatcattctgcggaaaactgacgaagctccacgactgagactgaaccat
ggcctcacactgaaggctggtgaggtgtctgtaatttcaccatcttcacttatggcagag
gacgaggactctgacgtggccaagataaagtacgtcgtgacgagacttcccacatcaggg
agtgttgaactgttcgaacaggaggcaaacacttggaagcctctcactgtgggctctgtt
ttcatgcaggaagatatcctgaatggcaatgtgaggttttcccaccaaaaagacactcag
gcagggacagacacactgcacttcaacctgcaagacacagaaggcaacgtgatgatggac
caggctctctcaatcattgtgctggaagacaagtatccgcctcacatcacactcaatgtc
ggtctctcactcatggaggatgcttcagctcccataactgctgatcttctgtctgccatg
gatgctgagatggacccaatggagctgacatttatgctgacaagtggtcctaaccatggg
cagctagagcttgcaacagcccctggaaaagcagtgaacacttggacacagggagcactg
gagttgggaatcctgcgctatcagcaccagtccgcagatgagagcccgacagatcaattc
actttcgtggtttcagatggttacaacaatgccagccagtctttccacatcaacatcatt
cctgtggatgatgagcttcctcttcttgtgctgaatcacatcaaggtacaagaaggaaca
agaaaaacaatatcccaatttgagattgaagcgttggatgccgatactaaagatgatctc
attatatttgaagtcacaagacagcctcgccatgggagattacagatcaagaaaggcaac
aaacatatagatgctaagacattcagcatgaggaacttatacaatggagatgtgtcctac
ctccatgatggctctgatgcctctcgagattccttcaaaatcaaagtctctgattcgact
aacagcatgtacatgaaggggaggggagaagagaccacgcaagaacccaccacagtgcac
attgagatctcttctgtagatgatggaactcctatcatcactgcaaacacagggctgcat
tttctccaacacgaagatggcaaggctcagaatatcataacatcacatgagctacacgta
gaggatgaggatacaccgcccgagaatctcaagttcacagttgtggctccacccagtcat
ggtgtcctcaggctcactactcatgaacgccctgtcttgtcgtttactcaagctgacatc
atctctggtcatctctactatgaactcactacgtattcccagtcagtaacaagtgatcac
tttacctttgaggtaaccgacagcaagccaaatactgtgaccggaaatgcttttcacatt
cagtggtcttggtttgttgtagcccagagggagtataatgtaacagagtctgatggagag
gcaaaaatactagtaaagagaactggaaatctaaaacaaccgtcagtggtcacctgtaca
acgcacacagggtctgccagtggtgggaagggtagggcgagaggagaggactttacagaa
gttgcagaacccatagagttcagagaaggagagacagagaagtactgtacaataccagta
catgatgatgaggaatttgaggggcctgaagtcttcactgtcaaactcacagatccaaaa
tatgccttgattgggaagcctaaaaaatctgtggtaactatctttgatgaggaagacaag
ccaaaggtagagtttgaaaccagtaattttgccgtagacgagacagaaggatttatattt
gcaagattaagacgcacaggggacctcaatgttcctgcatctgttatttgcctaactaag
gatggatcagctaagggatcagaacctaatcagctgacgagtggaactgatttcattcac
cggaaccatgacgaatcttccagagttgtatttcctcctggtgttaaggtgtcaacttgc
aatgtaaagatcattgatgaccctgaatttgaagacaatgaagacttcatgatatatcta
aaagatccctcagatggggtgattcttggggagactcatgaagcaacagtgagagttaag
ggatccaatgatgactgcaaaataaagctgacacagacacactacaatgtctctgagggt
gaatctgtagtgtcggtgactttagataggacaggcattgacctcaactactcctccagt
gtttggtgtgcaaccaagtccttccagcccgaggaggcccagccctctctggattacgtt
ccacactcggaacaagtcatctttcctagtggagttcagactgctgtttgcaatatcaac
attattgatgatagagtaaatccaagacttgaaggacctgaaagatttgtggtgtttatc
agcacagcacaaaatgcatctatagactcctctgctgcagaagcagttgtgacaatacag
gatgaggaagatgcaccttccatgcagtttaccctccctgaaattaaagtgagagagaac
cagactgttgtgaaaatacccattcaacgtacaggtgacttaagcagagtatcaactgtc
cactgcttcacacgacagcgctcagcaaaggcaggcattgactttatagagagaccaaac
acaaaagattcaatggtcacttttcctagaggagtctcaaaagttgaatgtgaagtgggc
atcctggatgacttagtgtttgagaaagaagaggaattcattgtgaagttatctcacccc
gagtccccctcacacctacagccaacgatgggagaaaatagaatcacacgtgtctccatt
ctagactgggaggacaggccaagggtatccttccagagaaatgattacacagtggccgag
cccttggctggggaactaacttcaaagtttaatgttcccatcatccggctgggagatgtt
tctcaggtgactcgagtgatggtgtctactagagatgggtcagctgcttcaggcacagac
tatcatccacttcatgcagaggttgaatttcctccaggcaacacctccattgacatggag
ttgaccattgtgcacaatccctcacgtcagtggcatgagaccttcagcctggtgttagga
cctgaggaaccggtcaatgcagagctgggaactatcacaacagctgcagtgaccattctc
gaccacaagtcttcgggtagttctgtcctgccagcaccaccggtagtgacatcacttttg
cactacgacaacattgaggagcaccttggagagcctgcaagtcctgggtacccactggtg
tgtgttacaccctgtgatcccaagtacccagagagtgcaaagacagcagaaatgtgtgct
caggctggactgaatgcctcccagatgcagtattcatgggaagtggctattcctgcagat
ggtgatggactgcttatgccattccactcactcacagatgacactctgtttgccagtcca
aacaccaaagtcctggattccatgttctttgctaggcacttccgtgtccgttgtgtagct
caacctgtgcgtagtgatggcgtgtttggcattcccctccggagtaaaccaatctctatt
ggaatccacaatggcatatgccaaacaccactagttcctggccagcctggaggtttccaa
agccagtccttcatagctacactgtcatacataaattccacagatgaaaagcatccaaat
actgtcaagatccatgttgaaatacctcaccaggatggcatggtgcccgtcgtctcaact
ctccccgtccacaacctccgctacttgctgacagagcagctgtaccgtgtccatcacacc
tgttctaacatggacctcacagctggattcttggctgaggccccagatcagcagcccatc
aaccccagaccttatcagagtgacttcaggctaagagagaaaaagtcattggagttgtat
caacacctggatctgaagacttgcatgtggactttctctgcttggttctctatgtcacag
ctggtagaccagtgtggtggtcaggtggtctcagattttcaggttggatctggtggacag
agtttcttaacggttcgtgttcctctgtatatatcctacgtgtatgcagcatcaccccct
ggatgggcttctctggaccatcgcactgaactctcggtatctttctactataatactctc
ctctggcatcaaggtcttcacacccaaccaatactgacagctaagatacaggtgacgagg
atatccatagatgaatctgggcggcttgtgatagacctgaagacagtagcaaagttccga
ggacagttcgtgctgcagcatcccaatctggaagaccacacctcaaggctagtggcacca
gaggaccttgagatacagttctcgctggagttggtgtggacggcttccacttgggatggg
ccagagcaggtatggcgagccaccagcgaatataacttgaaggattacacgggcaagtac
aagctggagctcataccctgcacggtaacgcccacgcaaggctactcggacatgtcgcca
cccgcctgcaccccacacccccccacgacgttccccctccccatcgccatacagcagact
caccgtcctgtgcctcttatttacacgctcaatacagacttccagctgttcaatagcgaa
accatgttcctcatggaccccaaggatgtggataatttgcaggaagtggattacaaagga
agctatggtccaggacaaacgatatacggcagagttatgtggcacccaagccaagacctg
cactctgcttacaaactctacatccagcgagtgttcctatgtactggtgcagagggatat
gtgcctacctacgaccccactggtgagctgtaccaagaaggaccacagtacggatgcatt
caaccctcgagcaagctgcgtcacaggttccttattcttgaccgagagcatccttatgta
gaagatggcaacctcagtattccaaagatcgaggccaactttgccgaggaccttcctgaa
tatgagactttgcatcagttttccggtgtcgatggtttcttgctaaagacagatgctctg
tatgaggttaattcaggttatcagtggtatcttcaggttctgtataccattggcccgagc
agtagtcgcagccgaagagatgccccattgcacacagtcctgtctcaattccaatcaaaa
gaggacgacctaggacgaacactcgtcaaaaggactctcatggacccgtcagaagattat
gtggaagatgaagttgaagaactgccaacgcctgcttttctcaggtccctccatacacgt
aatggaacaaatatgcgaggtttccagttggacacgggttcaaaaatggacgacagttcc
attttcctcaatgtgttgtatgtcattgttgttctagttgtccttctcggcataattatc
gctgggctgctcctggtgaagagacatttcagaaagtcggaaaaggacaaagtgattgtt
gtgcgcagcctaaagaacgagagagagcagtttagaaggaagggagaaggaaaggttcaa
gagagaccaaagacacttccacctcacatgaccctgaacagtgagagcaacttacagaca
gtcaaggtcaaaacattagcaataacagtaagaaataatttggaagatgaaggaactgaa
gtgtaa
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integrated database retrieval system
