KEGG   Penaeus chinensis (fleshy prawn): 125045778
Entry
125045778         CDS       T08118                                 
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
pchn  Penaeus chinensis (fleshy prawn)
Pathway
pchn04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pchn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125045778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pchn04131]
    125045778
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pchn04147]
    125045778
   04031 GTP-binding proteins [BR:pchn04031]
    125045778
Membrane trafficking [BR:pchn04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    125045778
 Autophagy
  Other autophagy associated proteins
    125045778
Exosome [BR:pchn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125045778
  Exosomal proteins of other body fluids (saliva and urine)
   125045778
  Exosomal proteins of colorectal cancer cells
   125045778
GTP-binding proteins [BR:pchn04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    125045778
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase SRPRB Gtr1_RagA CPT AAA_7 ABC_tran PduV-EutP AAA_16 AAA_29 Septin AAA_22 FeoB_N AAA_5 Ependymin TniB
Other DBs
NCBI-GeneID: 125045778
NCBI-ProteinID: XP_047499161
LinkDB
Position
38:15298625..15311993
AA seq 206 aa
MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQWLQEIDRYACENVNKL
LVGNKCDLTHKKVVDYQTAKEYADSLCIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPS
GGAASTQGVKINPSAPVEPNTGGGCC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcgacgatgaatcccgagtatgactacctgttcaagcttctgctgattggtgacagt
ggtgttggaaagtcttgcctccttttaagatttgcggatgacacatacacagagtcttac
attagtaccataggtgtagattttaaaattcgaacaattgaactagatggcaaaacaatc
aaactccagatctgggacactgcaggacaagaacgtttccgaaccatcacatcatcatat
taccggggagctcatggcatcattgttgtatatgacacgactgatcaggaatcctttaac
aatgtaaagcagtggcttcaggaaattgaccggtatgcatgtgaaaacgtcaacaaactt
ctggtgggtaacaagtgcgatctcacccacaagaaagttgtggattaccagacggcaaag
gaatatgcagattccctttgtatccctttccttgaaacatcggccaagaatgcgaccaat
gtagaacaggccttcatgaccatggcggctgagatcaagaaccgtatgggacccccctcc
ggaggtgctgcttccacccagggggtcaagatcaaccccagtgcccccgtggagccaaat
acaggtggcgggtgctgttga

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