Penaeus chinensis (fleshy prawn): 125045844
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Entry
125045844 CDS
T08118
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125045844
03036 Chromosome and associated proteins [BR:
pchn03036
]
125045844
Transcription factors [BR:
pchn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125045844
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125045844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-met
zf-H2C2_5
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
125045844
NCBI-ProteinID:
XP_047499326
LinkDB
All DBs
Position
38:complement(16602452..16617518)
Genome browser
AA seq
687 aa
AA seq
DB search
MEGSQAGETISDIHNYLDTFNKEIQTGDQATSGDVAQVFVDESGQYFYQNVDGSQQQMVV
VSSEGADGSEGDVGGGGADGSVMLHTEEDSLHEDGDSLSQSQVALGEDGTLQVISGMDQS
ETSNQVVLNTGDNNQIVTIVPSSTNPGEVSYVLIVEQSGENDKDDTVYDFNEADEGLSYE
SGEEDDKKMMRIIHKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERG
FKTLASLQNHVNTHTGIKPHRCKFCESTFTTSGELVRHVRYIHTHEKPHKCPDCDYASVE
LSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECEICHARFTQSNSL
KAHKLIHTDVASGNKPVYACELCPTTCGRKTDLRIHVQKLHTSDKPLKCKKCGKAFPDRY
TFKQHNKSHEGEKCFKCDLCPYASTSAKHLESHMLVHTEQKPYQCDQCDQAFRQKQLLKR
HQNLYHNPAYIPPMPREKTQECPECGKAFRHKGNLIRHMAIHDPDASAQEKAQALKIGRQ
KRLQLINGQQVEVYTGEVDEDEIMAVEGQDGNQYVVLEVIQLQDGEGHVMMSDGIPVADS
SLDGAGVASVLGSSPLMVPETITGDTMGPIDGTCLVSDPSLLELQQKKSELKTEISAEAK
KEAQKEMETCFGFDDEDEGQIHLEFDE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagccaggcgggagagacaataagtgatattcacaactacctggacaccttc
aataaagaaatacaaactggtgaccaggcaacctcaggtgatgtagctcaggttttcgtc
gatgaatcaggccagtacttctatcagaatgttgacggcagccagcaacagatggtggtg
gtgtcctctgagggtgcagatggttcagaaggagatgttgggggtggaggggcagatggc
tcagttatgcttcatacagaggaagattcgctgcatgaggatggtgacagcttatcccag
agtcaggtggcccttggggaggatggtaccctacaggtaatatctgggatggatcagagt
gaaacaagcaaccaggttgtacttaacacaggtgacaacaatcagattgttacaattgtc
ccatccagcacaaatcctggagaagtcagttatgttctcattgttgagcagtctggagaa
aatgacaaagacgacactgtatatgatttcaatgaagctgatgaaggtctcagttatgaa
tctggtgaagaagatgataaaaaaatgatgcgcataatacacaaaaagtcccaaactgtt
actcaggcccatatgtgcaactattgtaattataccagcccaaagagatatctcctgtca
cgacacatgaaatcacacagtgaagagaggccacacaagtgctctgtttgtgaaagagga
tttaaaaccctagcctctctacagaaccatgtaaatacacacacaggcattaaaccccac
cgttgcaaattttgtgaaagcacgttcaccacctcaggtgagcttgtgcggcatgtacga
tacattcacacccatgagaaaccccacaaatgcccggactgcgattatgcaagtgtagag
ttgagcaaactaaaacgacacatgagatgccatacaggggaacggccataccaatgtcca
cactgcacatatgctagtcctgacacttttaaacttaagcgccacttgcgcattcacact
ggagagaagccctatgagtgtgaaatctgccatgcgaggtttacgcagtccaattcactg
aaggcgcataaattgatacacacagatgttgcatcagggaacaagccggtatatgcgtgt
gagctatgtccaacgacgtgtgggcgaaagacagatctgcggattcacgttcaaaagctg
cacacctcagacaaaccgctcaagtgcaagaaatgtgggaaagcttttccagacagatat
actttcaagcaacacaacaaatcccacgagggagagaaatgcttcaagtgtgacctgtgt
ccgtatgcctcaacctcggcaaaacacttggaatctcacatgctggttcacactgagcag
aaaccttatcagtgtgatcagtgtgaccaggctttccgacaaaagcagctgttaaagcga
catcagaacctctaccacaacccagcgtacatcccccccatgcccagagaaaaaactcaa
gaatgccccgagtgtgggaaggcatttagacacaaaggtaacttgatccgacacatggca
attcatgatccagatgcctctgcacaagagaaagctcaagccctcaaaataggaagacaa
aaaagattgcagctcattaatggacagcaggtggaggtttacacaggagaagttgatgag
gatgaaattatggctgtggaaggacaggatggaaaccagtatgtggttctagaagtcatt
cagctacaggatggagaagggcatgtcatgatgtcagacggaatcccagtggcagatagt
tctctcgatggagctggagttgctagtgttttaggctcttcacctttaatggttcccgag
acaataactggagacactatgggccctattgacgggacctgtttagtttcagatccctcc
cttcttgaactccagcagaagaaatctgaactgaaaacggaaatcagtgcagaagccaaa
aaggaagcacagaaggagatggagacttgctttggctttgatgatgaagatgagggacaa
attcatttggaatttgatgaatga
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