Penaeus chinensis (fleshy prawn): 125045876
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Entry
125045876 CDS
T08118
Name
(RefSeq) uncharacterized protein LOC125045876 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125045876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125045876
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125045876
mRNA degradation factors
5'-3' decay
Decapping complex
125045876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
125045876
NCBI-ProteinID:
XP_047499398
LinkDB
All DBs
Position
38:complement(16637639..16652135)
Genome browser
AA seq
838 aa
AA seq
DB search
MDTDNFFGFDASLAPDDGCLEGGPEDEEYDALNDETFGSAMVDGDWEEGHEQMATLTEAG
RISNKHKQLQNALRRDDDGGLATDFHNLGLGRFGGQDGNRFGGSEGGRLGQGSAPINIVG
YQSGPTAHHHHMSSALLAGPDLPGSPSNSIWTPSPVLDKLLPVSHHSPSNGVNHSLNQMH
VLSQGGMSQPLGLPSIKTVAELEEELKLQQSRDQTPHGLHMNVVRAEDLERELARQTANK
QPHQQHHHPGMNNQMPNHHQYLPRQGSFSGGMPNNHGQMNRPFQRPFGSPGNFQNQMPHL
PHQHHQQQRYINNFHNNNNKGMFGQHQMQQQHHHHNQPHAHPNQGHEGFNNYHHHHQNSY
NNHYSQQQQQQQNYHHYNNRNPDNRYFNHNGLDSSRGGNERRNMDRRNYDQNRGYDQGKG
RPNNSRDDYSGHSGGRTRRDSEAEWEEWHRMREQDEYCGLMTPREKSWLKNIQAMQLHSD
SPYQDDYYYVMYSVKQQRKREEEVIEIDGLQLLLPDRGKDGGREYEPPRLENSLGKLQVV
SVNAPRKIIDLQVVHLDPSHPTTPLQREMRKHRHLLLHIEKLFNVMMELDDLERKIRLLP
DCPTRDLFQSKSRTLASKLWENIHATPERLVQLLCIRKGKSLLVRLLNWLGPNECEKVVM
TILQNMTLLSKRDTHDHHLELFWPITDHLIDLAVHQQLLEFASALTAQGGGPQKANLVSA
LYNKYGVSLLMALMVRGESLLANLEDTPEWQEFLLAIITGLVAVPDNTGKPSSDSSKTPS
EMPQALPSVAVAASPHRPAQHLARCKAADPAVLKVAQEKMTALTVSHTKPKGQSPAKS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacaatttcttcggatttgacgcttccttggcgcccgatgatggatgcttg
gaaggaggacctgaggatgaagaatatgatgctctcaacgatgagactttcgggtcggca
atggtggacggtgactgggaggagggccacgaacagatggccaccctcacagaagccggc
cgaattagcaacaagcacaaacaacttcagaatgctttgagaagagatgatgatggaggc
ttagctacagattttcacaacttgggtctaggacggtttggtggccaagatggaaatcgg
tttggaggttctgaaggtggtaggctgggccagggcagtgcacccatcaacatcgttggg
tatcagtctggacccacggctcaccaccatcacatgagctcggcactcctggctggacca
gatttgccaggctccccatccaacagcatttggaccccctcacctgtcctggacaagctc
ctcccggtcagtcaccattccccttccaatggagtcaaccactccttgaaccagatgcat
gtgttgagccaaggcgggatgtctcagcctttgggactgccttccattaagaccgtggca
gagttggaagaggaattgaagctgcagcagtcaagggatcagacacctcatggcctgcac
atgaatgttgtgagagcagaagatttagagagggaattggcacgacagacagctaataag
caaccacaccaacagcaccatcatcctgggatgaataatcaaatgccaaaccaccaccag
tatctaccaagacaggggtcattctctggaggaatgcctaacaatcacggccagatgaat
agaccgtttcagaggccatttggtagtccaggaaacttccagaatcaaatgccacatctc
ccacaccagcatcaccagcagcagcgttatatcaataacttccataataacaataacaaa
ggaatgttcggccagcaccagatgcagcagcaacaccaccaccacaaccaacctcatgca
caccctaaccaaggccatgaagggttcaataactaccaccaccaccatcagaatagctat
aataaccactactcacagcaacagcagcagcagcaaaattaccaccactacaacaaccgt
aatcctgacaaccgttacttcaaccacaatggcttggactcgtctagaggtggaaatgag
agaagaaacatggacagaagaaactatgaccagaatcgtggatatgatcaaggcaaaggt
cgtccaaataatagccgtgatgactactctggtcactctggtggacgaacacgaagggac
agtgaggcagaatgggaggaatggcatcgtatgcgggaacaggatgagtactgtggcctc
atgactccaagagagaaatcatggctgaaaaatattcaagcaatgcagctccattctgac
agcccataccaggatgactactactacgtgatgtatagtgtaaagcaacagaggaagagg
gaggaagaagtgattgaaatcgatggactccagttactcctgcctgaccgtgggaaagat
ggtggtcgggaatatgagcccccaaggctggagaactcccttggcaagttgcaggtggtt
agcgttaatgctcccagaaagatcattgacctgcaagttgtgcaccttgacccgtcccac
cctacgacaccactacagcgtgaaatgaggaaacatagacatctccttttacacatagaa
aagcttttcaacgtgatgatggagttggatgatctggaacgcaaaatccgtctcttgcca
gactgtcccactagagatctcttccagtcgaaatctcgtacattagcctccaagctatgg
gaaaacatccatgcaacaccagaaagattagtacagttactctgtataaggaagggaaag
agtttgctggttcgtcttttgaactggctgggtccaaatgagtgtgaaaaagttgtcatg
acaatactgcaaaacatgacacttctgtccaagagagacacccatgaccatcacttggaa
cttttctggccaatcactgaccatcttatagacttggctgtgcatcagcagctcttagaa
tttgcatcagctctcactgcacaaggagggggacctcagaaggcaaacctggtgtctgct
ctgtacaacaagtatggtgttagcctactgatggcacttatggtacgaggtgagagtctc
ctggcaaatctagaagataccccagaatggcaggagttcctgttagccattatcactgga
cttgtagccgtccctgacaacacaggaaaaccttcaagtgattcaagcaagactcccagt
gaaatgccacaagctcttccttcagttgcagtggctgcatcacctcatcgccctgcccag
cacctagctcggtgcaaagctgctgacccggccgtcctaaaggtggcccaagagaaaatg
acggcccttacagtcagtcacaccaaacccaagggtcaaagtcctgccaaatcttag
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