Penaeus chinensis (fleshy prawn): 125046011
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Entry
125046011 CDS
T08118
Name
(RefSeq) transcription initiation factor IIB-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125046011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125046011
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125046011
Prokaryotic type
Archaeal type
TFB
125046011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
125046011
NCBI-ProteinID:
XP_047499555
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All DBs
Position
38:16977939..16997843
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AA seq
313 aa
AA seq
DB search
MASGGRFNEVCCPQHPEAHLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKANSD
PSRVGGAENPLLNGSDLSTIIGPGTGSASFDGFGGSKYQNRRSMSGSDRALINAFREISN
MADKINLPKAITDRANMLFKQVHDGKNLKGRSNDAIASASLYIACRQEGVPRTFKEICAV
SKISKKEIGRCFKLILKALETQVDLITTGDFMSRFCSNLGLPTAVQKGATHIARKAVDLD
IVPGRSPISVAAAAIYMASQASEDKRTQKEIGDIAGVADVTIRQSYKLMYPRAKELFPED
FKFYTPVEQLPQL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggggccgttttaatgaggtctgctgtcctcagcatccagaagcacactta
atagaggattaccgtgctggtgaccagatctgctcagaatgtggtctggttgtaggtgac
agagtgattgatgtgggttcagagtggcgtacattcagcaatgaaaaggccaacagtgac
ccttcccgtgtgggaggggcggaaaacccactcctaaatggctctgatctttccaccatt
attggacccggcacaggcagcgcatcattcgatgggtttggagggtccaaatatcagaac
agaagatctatgtcaggttcagaccgcgccctcatcaatgccttccgagagatcagtaac
atggcagacaagatcaacctgccaaaagccattactgacagagcaaatatgttgttcaaa
caggtgcacgatggcaaaaatttgaaaggacgtagcaatgatgccatcgcgtcggcttcc
ttatacatagcctgtcgacaggagggagtacccagaaccttcaaagaaatttgtgctgtg
agcaagattagtaagaaagagattggacgatgcttcaaactcatcttgaaggctctggaa
acccaagtagatcttatcaccactggagacttcatgtcaaggttttgctcaaatcttggc
ctcccgacagctgtccagaagggtgccacccacattgccaggaaagctgttgatttggac
atcgttcctggaaggtcacccatttctgtagcagcagcagcaatttacatggcctcccaa
gcttcagaggacaagcgaactcagaaggaaattggtgatattgctggtgttgcagatgtc
accatcagacagtcgtacaagcttatgtacccaagagcaaaggaacttttcccagaagac
ttcaagttctatacacctgtggagcagctgccacagttatag
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