Penaeus chinensis (fleshy prawn): 125046044
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Entry
125046044 CDS
T08118
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125046044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125046044
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125046044
mRNA degradation factors
3'-5' decay
Pan complex
125046044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
RecO_N_2
Motif
Other DBs
NCBI-GeneID:
125046044
NCBI-ProteinID:
XP_047499605
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All DBs
Position
38:26697444..26725742
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AA seq
698 aa
AA seq
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MDPLFLNLSLPQQAVAATSTPPVANQVNGLPQESKLATYISNRHQLPATTQPQQQQQEHS
LTKSIAALSLDGVGTRKISVPSVSSIAEFVPGSGGSAGLAHSASTPSFHSFTGLGSPSTP
SSLSFTPMTGTSPAATVASPQRPVSPQGSPSRGRHSPLVGGGDDTSNASSLSTYQENVGG
TTYFFTAQDQQSFTAGAAPSPAPFTAGPPPLVFPPYHILPPTPAHIHHLRAPSNTPHFFM
GDELRHDLLERHALALAHVDPENFPDLPQEVDMYHELVPVEPQPAINKSSMFGYATSVYK
ATNIKTGLHYCLYRIHGYRLSNVKVTQLVDLWKKIQHSSVTQLREVFTTKAFNDNSIVFV
YDYHAGAETLAARHFSSPAALTASGWEGLINSHGGTSGNSPHDPSSRSLHKSHRHNSGNS
LLPEATLWNYIIQLTGALRTIHTQGLACRTLDPSKILLTDNKSRIRVNCCGILDVLNFDP
NAANPLANMPQYQQEDLVNLGKLMVALACNSILALQRDNIQAALELINRSYSRDLAMLVV
CLLTSQRIKSINDVMPMIGARFYTALESATQRADVYESELSKEIHNGRLFRLLTKLNTIV
DRPELNMDTAWCETGDRYMLKLFRDYVFHQVTDDGRPWLDLGHVVTVLNKLDAGSPDKIC
LMSHDEQNILVTSYAELKRCFERSFAELLQAASSHKAT
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaccctctcttcctcaatctgagcctgccacagcaggctgttgctgccacttccaca
cctccggttgcaaatcaggttaatggccttccacaggagtcaaaactcgccacatatatt
agtaatcgacaccagctgccagccaccacacaaccacagcagcagcaacaggagcattcc
ctcaccaagagcattgctgctctcagcctggatggggttggaacgaggaaaatcagtgtg
ccatcagtgagtagtatagcagagtttgtgcctgggtcaggtggaagtgctggcctggcc
cactctgcctccacgccctccttccattcgttcactggcctcggctccccctccacacca
tcctcgctgagcttcacccctatgacgggcacttccccagcagccacagtggcatctccc
caacggcctgtttctccccaagggtcacccagtaggggacggcactcccctctggtgggg
ggtggagacgacacaagcaatgcttccagtttgtccacctaccaagagaatgtagggggc
accacctacttcttcactgcccaggaccagcagtcgttcacagctggggcagcaccttcg
cctgccccattcacagctggtccgcctcccctggtgttcccaccttatcacattctaccg
cccacacctgcccatatccaccacttgcgtgcacccagcaacacgccgcacttctttatg
ggggatgaattgcggcatgacctgttggagagacacgctcttgctctggctcatgttgac
ccagagaattttcctgatttaccacaagaggttgacatgtaccatgagttggtacccgtt
gaacctcagcctgcgataaacaaatcatctatgtttggatatgctacctccgtttacaag
gcgaccaatatcaagacagggcttcattactgcctttatcgtattcatggctatcggctg
agtaacgtgaaggtcacccagctggtggatctgtggaagaaaattcaacattccagtgta
actcagttgcgagaagtgttcaccacaaaggcctttaatgataactcaattgtgtttgtc
tatgactatcatgccggagcagagaccttggctgctcgtcacttctcctcaccagcagca
ctgactgccagtggttgggaggggctgatcaactcccatggagggacaagcgggaacagt
ccccatgacccatcgtccaggagcttacacaagagccatcgccacaattccgggaacagt
ctgttgccagaggcgaccctctggaactacataatccaactcactggggcattgaggacc
atccacactcagggtctcgcttgtcgcacactagacccatccaaaattctccttacagac
aacaagtcaagaatcagggtgaactgctgcgggattcttgacgtgttaaactttgatccg
aatgctgccaaccccctggccaacatgcctcagtatcagcaagaggatttagtgaacctt
gggaaactaatggtggctctggcatgcaattccattctggctctgcagcgagacaacatc
caggcagctctggaactcatcaacagatcatactcacgggatttggccatgttggtagtt
tgtttgctcacctcacagcgcatcaaaagcattaatgatgttatgccaatgattggtgcc
aggttctacactgctctagagagtgccacgcagagagctgatgtttatgagagtgagctg
tccaaagaaatacacaatggtagacttttccgtcttttgacaaagttgaataccattgtt
gatcgaccagaactcaatatggacacagcctggtgtgagacaggagatagatatatgctg
aaactcttccgtgattatgtgttccatcaggtaactgatgatggaagaccgtggttggac
ttgggacatgtggtgactgttctgaataagttagatgcagggtctcctgataagatttgt
ttgatgtctcatgatgagcaaaacatcctggtgacctcctatgcagaattaaaaaggtgc
ttcgaacgctcctttgcagagctgctgcaggcagcatcttcacacaaggcaacataa
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