Penaeus chinensis (fleshy prawn): 125046265 Help Entry 125046265         CDS       T08118                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism pchn  Penaeus chinensis (fleshy prawn) Brite KEGG Orthology (KO) [BR:pchn00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pchn03000]     125046265    04121 Ubiquitin system [BR:pchn04121]     125046265 Transcription factors [BR:pchn03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     125046265 Ubiquitin system [BR:pchn04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     125046265 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_4 Prok-RING_4 zf_CCCH_4 zf-C3HC4_2 Vesi_VP2 SprA-related PaaA_PaaC Motif Other DBs NCBI-GeneID:  125046265 NCBI-ProteinID:  XP_047500026 LinkDB All DBs Position 38:complement(28626651..28670167) Genome browser AA seq 1060 aa AA seqDB search MPIQAPQWTEFLSCPICCHEFDGGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE LDQLPVNVALLSLVGAGTNVEEGDLPPPPPVPPTHTRKYFIAVKCIKDLALFLKPFSGTG TNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNHQQLSA NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD QWSSLLYGDTAHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPQLELLA ALDPSPDAPPPGWEPCAAAMEAVRAVVTGLVHFIQHHGNRKLPDAHHPHNAKYKTSMCRD LTQRGGCPRGNNCTFAHSEDELEKYRNRSRKHGKGIPQPPPTPATKLQPPPTQTYQQLSH PTQPQQPQQQNVDAVIAPNNGECVAVPVIQKALPVEEIPQAGAVPPAPTSFDPNKYVSIQ PHTQAMSVLPAPTPAPAIVQPALAATPLYATPVAEYTYSSFPCQPPVFAQPTPGPQPLQS AAAAAAAAAAAAAAAAVFPGQPTAILPDMYGSNPPVLVNTTPVYNIHGPGSEFCIPVANT SSKGTNSSPLSTWSESTTTTSSASSMSVVSKIANKSMEELKERKEAILNQLENIVGKEAT NRVATEIANGEEPIKSQEFTSTYSIWTSGANFYNVPKMVEKNYDPSTGYRTDISKKDEVN PKRKDDFIPFDPPIVSRFGPISRMSRSVIRPSNPIQVSASNTTEPATTPTVRRPVPAISP MPQVLYQPGGYTLGFMAYTPTALDHMNTVGHGILDPPHLHMSQLEPSGMRPSDPVPNTYD GLNPADQEDCFRQQLNSVTEGIETIMVNAHSVAECEEMRLKKELSLVMNGIEVKRKEMEE RVPAQNKRGGGLLAACWSANRLGGHGDRLTPPLSEALIPMVLTLWLIRSPPFPSQQPIHD CFLNITLEKSSRSLSEEEEDKDLGDFEKNWKFDFDEGEKE NT seq 3183 nt NT seq  +upstreamnt  +downstreamnt atgccgatccaggccccccagtggacggagttcctgtcgtgccccatctgctgccatgag ttcgatggtggccagcgcgggcccatcagccttgggtgtggacacacagtgtgccgtgct tgccttgccaagctccagcgcaatcagtgtccatatgaccagactgtaatgagactggag ctggaccagcttccggtcaatgttgcactgctgtcactggtgggggctgggacgaacgtg gaggagggagacctgcccccccctccaccagtgcccccgactcacacccggaaatacttc atagccgtgaagtgcatcaaagatcttgcactatttctcaaacccttctctggcactgga acaaatggctcgacatcactcctctcccgccctatgcaacggaagctggtcaccctcatc aactgtcaactagtggaagatgagggcagagccagggcggtccgggcagcacgatcgctc ggggaacgcaccgtcacagaactcattttacaacaccagaaccaccagcagctctctgcc aacctctgggctgcagtcagagcaagagggtgccagtttctggggcctgcaatgcaagaa gaggtgctgaaattggtattgttggccttggaagatggatctgctctgtctaggaaagtt ttggtcatgttcgtcgtccagcgccttgaaccacacttcccacaggcttccaaaacaagt ataggacacgtagtacagttgctttaccgtgcctcgtgtttcaaggtatcaaaacgagag ggtgactcctccctcatgcagttgaaagaggagttccggacatatgaggcactcagaaga gaacacgatgcccagattgtccagattgccacagaagctggattaagaatagcacctgat cagtggtcatccctcttgtatggggacaccgctcacaaatctcatatgcaatcaatcatt gacaaactgcaaacccctcagtcatttggtcagtcagtgcaggaattagtgatagcgctt cagagaacaggtgaccctggacagctgtcctccctgcggccccagctggaattactggca gcgctagacccctcccctgatgcaccacccccaggatgggagccctgtgctgctgcaatg gaggctgtccgagctgttgtcacaggacttgtccacttcatacagcaccacggcaatagg aagttaccagatgcacatcatccacacaatgctaaatacaagacaagcatgtgccgggat ctgacacaaagaggggggtgtccaagaggtaacaactgcactttcgctcattcagaagat gagcttgagaagtacagaaacaggagtcggaaacatggcaaaggcattcctcagccaccc ccaacgcctgcgactaagttgcagcctcctcctacacagacataccaacagctgtcacac cccacacaaccacaacaacctcagcagcaaaatgttgatgctgtcattgcccctaacaat ggagaatgtgttgctgttcctgtcatacagaaggctcttcctgttgaagaaataccccaa gcaggtgcagtaccaccagccccaacctcatttgacccaaataaatatgtttctatccag cctcacactcaggcaatgtcagtcctgccagctcccacgccagctccagccattgtgcaa cctgctttggcagcaacaccactctatgcaactccagttgcagaatatacctatagttct ttcccttgccagccaccggtatttgcacaacctacgcctgggccacaacctcttcagtca gcagcagcagcagcagcggcagcagcggcagctgctgctgcagctgctgtcttccctggt cagcctacagctattttgccagatatgtatggctccaatccacctgtgttagtcaataca acacctgtatataatattcatggtccaggaagtgaattttgcattccagttgctaatacc agctccaaaggaacaaattcctctcccctttcaacctggtctgaaagtacaactactaca agcagtgcttcatctatgtctgttgtttcaaagatagccaacaaatctatggaagaactg aaggaaaggaaggaagctatactgaatcaacttgagaacattgttgggaaagaagcgacc aatcgtgttgccacagaaattgcaaatggtgaggagccaatcaagtcccaggagttcaca tccacatacagcatatggacctctggtgctaacttttacaatgtgcccaaaatggtagag aagaactacgacccgtcgactggctaccgcactgacatatcaaagaaagatgaggtcaac cccaagaggaaagatgactttatcccattcgaccccccgatagtcagtcgctttgggccc atctcaagaatgtcaagatcagtgatccggccttccaaccccattcaggtatctgcaagt aataccactgaacctgccaccacacccactgtaagaagaccagtccctgcaatttcaccc atgccacaggttctctatcagcccggaggctatactctagggttcatggcatacactccc acggccctcgaccacatgaacacggtgggccatgggatccttgatcccccacacttgcac atgtcccagctggagccttcagggatgagaccaagcgaccctgtgcccaacacctacgat ggattaaatcctgcggatcaggaggattgtttcaggcagcagctcaactctgtcactgaa gggattgaaaccattatggtgaatgcgcattcggtggctgagtgtgaagaaatgagactc aagaaagagttgagtctggtcatgaatggaattgaagtgaagcgcaaagagatggaggag agagtacctgcacagaataaacgtggtggaggtttgttggccgcttgctggagcgccaac aggcttggaggccatggtgatcgcttgacaccaccactgtcggaggccctcatacctatg gttctgacattgtggctcatccgatcaccaccatttccatctcaacagcccatccatgac tgcttcttgaatatcacacttgagaaatcaagcaggtctctgtcagaggaagaggaagac aaagatcttggagattttgagaagaattggaagtttgattttgatgaaggtgaaaaggaa taa

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