Penaeus chinensis (fleshy prawn): 125046392
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Entry
125046392 CDS
T08118
Name
(RefSeq) DNA mismatch repair protein Mlh3-like
KO
K08739
DNA mismatch repair protein MLH3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125046392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchn03400
]
125046392
DNA repair and recombination proteins [BR:
pchn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125046392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
DNA_mis_repair
MutL_C
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
125046392
NCBI-ProteinID:
XP_047500098
LinkDB
All DBs
Position
39:complement(3505969..3515049)
Genome browser
AA seq
1795 aa
AA seq
DB search
MSGKILPLSESVRSKLRSGITITSVAQCVEEMVLNSIDASATCIAIRIDPAIFRIQVVDN
GDGVTEENLKLLGKRHATSKCHSLDDLNSNLGHYGFRGEAMASLVEVAAIVDITTRPRGS
VQTLTKIFAYGKEKSISVAKVPRPSIGTTITVQDFMYNMPVRRKLMKEAIDIENIRVRLE
SFALIHPKISLSLRNDNGQSKVMHTNKSNSTLSTFMQLFGLEKSQGLVEVEHTVDQFTVT
GYISVQPHLTKALQFIYVNKRVVLKTKIHKMMNYLLARTSIISNRLHPATPLQGKSPSSP
PKGLKLHGIYVINIECPPKEYDICMDPTKTLVEFRDWDKLLLCIEEMVIKFAEEERLAIS
LDERFRRSGRDQGMIEEESQAEPHSSQALLQVFSLKRSGENSKWKGEPQEKYGRTLCTYD
NLSAVHSIPVRRKNNEKKNAQRYNEIDSGDDDETVLRAVESKEIDDESCHPSEVCLSKET
DDLNSERTSEICDNNSPPSSISKQNLSPRILSTRSPEKIQEAKNKVRSSLDMFRRMVTQS
DSDTTSPHPSCEDQSVSKATVLRETGRSNSETHDEANNKDSNKKRSSLEEFKSFYTEDLK
KCKQESYETPQELIRSPPREPPPLRVAPSPPTSTEDTSQDTSQEVSMDPIIKNLGGDEEQ
KEKKSLSKTLSEGWKKHQAKAKSLKCLQKFEFQRKSSNQSICINKSTSHEVAQRGKKSPK
ADFSNTEPKTRYQTRKSLHQKMKDSVTVQTSDSESDNDANGKALHKESRKYVDLDCSFKF
QPVLESEIKEAKFPKNAEILDDTVSQTRLERSLGSRIVTLSKEPEEISTQDAVENDYNKC
SEIGDDREEIQRFIPDENCVENNKNHEVHEPLISQTNDIEAFTTGNKPEFGHQALNESEE
MKKKIFQTVSEQGEMFSITHTAKKNLDYYCKEISPTQPFVIEGISSGKKYETGSTQQVIT
GQSSNKVQDDAKESSAFLSDFIDKDAVDSVVKCNLRGNDLDVADAPKNVEQLKVCNLENV
NDVNMKYVGEHQTICNSIGAYNIQEHCETLPLSKNNYPNTEVNFRLCESTSQLSSAEDAG
TESHICNENVAGIRSSDEYGQMEMKSHNKHIQSPPLISSDNPGSQNPLSASLHFSELSIP
STRDSPSISQCASSLADTCNAKTLFGSSVPSLSSDSSCVTEKSESTKSKFPSYNIVFHGK
MIHIDGKNQSAVPTDQGVCHTVSRETSPKQLEQNNSSLESENLLKKTSGKEKDDLEESDV
PSRSSSDTELQNSEDRVCNKEATSKNNPAYLQEDSSYDMTHSSKANCITEHDPNQSTSNY
LRNLWKEATDDSGRKVYINLQTGNTSYEAPVIKEMPEWTSSQPQGAPVLKIPLSEEPEAE
GSHQKQDFVLTHGYSAFMSWKKRREMEKKKVLEKSEINVSGIAYDNSRDTKQDQFRQEAI
SKEGEECESLISSGMKEAIQSILQDSEMDDDSIKWSEKPSNLGSIEEDSSEVAQICQEWE
PPTFAMDADILSSKVQGTGSERGVNKDSSVKIYNIVHPYKFSQEMLQTCKVLGQLDKKFI
ACEITYTSSDPTLHKVNEIIVLFDQHAVHERVRLETLTEENYESLENGERVIRTCMITPP
LEMTLPESEVRLMMAYTRTFIQWGLHFTQVSASQVNFHAIPSILVARERHELRQRRCQSA
TAIIESIVRDVCYTLHQTGGVVSTMPKPLMNVLCSQACRGAIKFGDELSYNECENLVKSL
SSCALPFQCAHGRPSIVPVVNLTHLAKGNKRERKPNLHKLREAIEEEMLGEENMD
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaagattcttccattgtctgagtctgtgcgctcaaagctgcgttcgggcatc
acaatcacctctgttgcccagtgtgtggaagaaatggtactgaacagcattgatgccagt
gccacgtgcattgccattcgaattgatccagccatttttcgcatccaagttgtagacaat
ggtgatggtgtcacagaagagaatctaaagttgttaggtaaaagacatgccacaagcaaa
tgccatagcttggacgatcttaattccaacttggggcattatggcttccgaggagaggcc
atggccagtctagtggaagtggctgccattgtggacatcaccacacgaccacggggatca
gtgcaaaccttgaccaagatttttgcctatggcaaagagaagtccattagtgttgctaaa
gtacccaggccaagtattggaaccacaataactgtccaagattttatgtacaacatgcct
gtccgccgaaagttgatgaaggaggcaattgacattgagaacataagagtacgattggaa
agctttgccctcattcacccaaaaatatcacttagtctaagaaatgacaatggccagtcg
aaggtgatgcacactaataaatcaaactctactttgtcaactttcatgcagctgttcggt
ttggagaagtcacagggtctagtagaggttgaacatactgttgatcagtttacagtaaca
ggttacatcagtgtccagccacacctgaccaaggccctgcagtttatatatgtgaataag
agagttgtgctgaaaacaaaaatacacaagatgatgaactatcttttggcacgcacatca
atcataagcaatagactccacccagcaacacctctccaaggaaaatctccttctagccca
ccaaagggtttgaaattgcatggcatatacgtaatcaatattgagtgcccaccaaaagag
tatgacatatgcatggatcccacaaagactcttgtagaattcagggattgggacaagctt
cttctctgcatagaagaaatggttattaagtttgctgaggaggagagattggccatatct
cttgacgagcgattcagaaggtcagggcgggaccagggaatgattgaggaggagagtcag
gctgagcctcatagcagccaagctctgttacaggtatttagtctcaaaagatcaggagaa
aatagtaaatggaaaggagagcctcaggagaaatatggtagaacactctgtacttatgat
aacttgtctgcagttcacagtatcccggtcagaagaaaaaataatgagaagaagaacgct
cagagatataatgagatagattcgggtgatgatgatgaaactgtactgagagctgttgaa
agtaaagagatagatgatgaaagttgtcatccatcagaagtatgtctaagtaaagaaact
gatgatcttaattcagaaagaacaagtgaaatttgtgataacaattctcctccaagttcc
atctcaaagcaaaacttatcaccaagaatactaagtacaagaagtccagagaaaattcaa
gaagccaaaaataaagtccgcagttctttagatatgtttaggagaatggttactcaaagt
gacagtgacacaaccagtccacatccttcttgtgaagatcagtctgtgagtaaggcaact
gtgttaagagaaacaggaaggtcaaatagtgaaacacacgatgaagcaaacaataaagac
agcaacaaaaagcgtagctctttagaggaatttaaaagtttttatactgaagatctgaaa
aaatgtaaacaggaatcatatgaaactccccaggaactaatcagaagccctcccagggag
ccaccacctcttagagtagcaccatcccctcctacttctacagaagatacatcacaagat
acatcacaagaagttagcatggatccaataataaaaaatttgggaggagatgaagagcaa
aaagagaaaaaatctctcagcaaaaccctcagtgaaggatggaagaagcatcaagcaaaa
gctaaatccttaaaatgtcttcagaaatttgaattccaaaggaaatcatctaatcagtcc
atatgcatcaacaagagtacaagtcatgaagtggcacagagaggtaagaaaagtcccaaa
gcagatttcagcaacactgaacccaagaccaggtatcagaccaggaagtccttacatcag
aaaatgaaagattcagtcacagtccaaacgtcagatagtgaatctgataatgatgccaat
ggaaaagctcttcacaaggaatccagaaaatatgtggatctagactgcagcttcaaattc
cagccagtactagagtcagaaatcaaggaggctaagtttcccaaaaatgcagagattcta
gatgatacagttagccagactagactagagagaagcttgggttctagaatagtcacatta
tctaaagagcctgaagagatatctacacaagatgcagtggaaaatgattataacaagtgc
agtgaaataggtgatgacagagaggagatccagagatttattccagatgaaaactgcgtg
gaaaacaataaaaatcatgaagtccatgaacctttgatatcacaaacaaatgatatagaa
gcatttacaaccggtaataagcccgaatttggtcaccaagcattaaacgaatctgaagag
atgaaaaagaaaatattccagacagtttctgaacagggagagatgttttcaataactcat
actgcaaagaagaatttggattactactgtaaagaaatatccccaacacaaccttttgtc
attgaaggtatctccagtggaaaaaaatatgagactggcagtacacagcaagttatcaca
ggccaaagttcaaacaaagttcaagatgatgctaaagaaagcagtgcatttttgtctgat
tttattgataaggatgctgtggactctgtagtcaaatgtaatttaagaggtaatgaccta
gatgtagctgatgccccaaagaatgttgaacagttaaaggtgtgtaatttggaaaatgtt
aatgatgttaatatgaagtatgttggagaacatcaaaccatttgcaactcaataggtgct
tacaacatacaagagcattgtgaaaccttacctctttctaaaaacaattatccaaatact
gaagtaaacttcagactttgtgaatcaacatcacagcttagcagtgctgaagatgctggt
acagaaagccatatatgtaatgaaaatgttgcaggtatcagaagtagtgatgagtatggt
caaatggagatgaagagccacaataaacatatccagtcacctcctctcatttcatcagat
aaccctggctcgcagaatcccctgtctgcatctctccatttttcagagctctccatacct
agcaccagagattctccatcaatttctcagtgtgcatcatcacttgctgatacttgtaat
gctaaaactctttttggctctagtgttccaagccttagcagtgacagttcatgcgtgaca
gagaaatcagaaagtacaaaaagcaaatttccttcttataacatagttttccatggcaaa
atgatacatattgatggtaaaaatcaatcagcagtacctacagatcaaggagtttgtcat
acagtaagtcgagaaacatcacccaagcagctggagcaaaataattcaagtttagaatca
gaaaacttgctcaaaaaaacatctggaaaagagaaagatgatttagaagaatctgatgtt
cctagtaggagctcaagtgatacagagttacagaattcagaggatagggtttgtaacaaa
gaggcaacaagcaaaaataatccagcatatttgcaggaggacagtagttatgacatgaca
cacagctctaaagctaactgcataacagaacatgatccaaaccagtcgacaagtaattat
ctcagaaatttgtggaaggaagcaactgatgacagtggaaggaaagtctacataaacctc
cagacaggaaacacttcttatgaagctccagttattaaggagatgccagaatggacgagc
agccagccacaaggggccccagttctcaagatccctttatctgaagaacctgaagctgaa
ggaagccaccagaaacaagattttgtcctcacacatggatatagtgccttcatgtcatgg
aaaaagagaagggaaatggagaagaagaaagtactggaaaagtcagagattaatgtgtca
ggcattgcttatgataacagcagagatacaaagcaggatcagtttaggcaagaggccatc
agcaaagaaggagaagaatgtgagtccctaatatcttcaggaatgaaggaagctatacag
tccatattgcaggactctgaaatggatgacgattccattaagtggtccgagaaaccatca
aatttaggcagtattgaggaagactcatcagaagtggcccaaatctgtcaagaatgggag
ccaccaacattcgccatggatgcagatatactgagttcaaaagttcagggaacaggaagt
gaacgaggagtgaataaggactcatctgtaaagatatataacattgtccatccatacaag
ttctctcaagaaatgcttcagacctgcaaggtattaggccagctggacaagaagttcata
gcctgtgaaattacttacacttcttctgatccaactctacacaaagtgaatgaaattata
gtactttttgaccaacacgcagtccacgagagagtgcgtcttgagaccctcactgaagag
aactatgaatccctagaaaatggagagcgtgtaattcgcacttgtatgattacaccaccc
ttggaaatgaccctgcctgagagtgaagttaggctgatgatggcatacacaagaacattc
atacagtggggccttcatttcacacaggtcagtgcatcacaggtgaatttccacgctata
ccaagtattctggttgcacgggaacgacatgagcttcgtcagcgtcgctgccagtcagcg
acagccattattgagagcattgtgcgagatgtttgttacaccctgcaccagacaggtggt
gttgtctcaacaatgccaaaacccttaatgaatgttctttgcagtcaggcttgcagagga
gctatcaagtttggagatgaattgagttataacgagtgtgaaaatctagtgaaatcactg
tcctcatgtgcactgcccttccaatgtgcccatggacgtccctcaatagtccctgtggtt
aatctgacgcaccttgcaaagggaaataaaagagaaagaaaacccaacttgcacaagctg
agagaagctattgaggaggaaatgttaggtgaagagaacatggactag
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integrated database retrieval system
