Penaeus chinensis (fleshy prawn): 125046398
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Entry
125046398 CDS
T08118
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125046398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125046398
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125046398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
125046398
NCBI-ProteinID:
XP_047500105
LinkDB
All DBs
Position
39:complement(3716585..3751259)
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AA seq
505 aa
AA seq
DB search
MKKDGAWRDMMAHPGGGNGPRGRNIPHDGEEKGSFEVMLLGPDSPVGRRTGGLRAPNIPY
EGDEQGKMFVGGLSWETTQESLQRYFGQYGEVIDCVVMKNSETGRSRGFGFVTFADPNKV
DVVLKSGPHELDGRTIDPKACNPRSMQKQKKNGNWPKVFLGGLPSNLTETDLRNFFSRYG
AVMEVVIMFDQEKKKSRGFGFLSFETEEAVDRAVAEHFVNINGKQKVEIKKAEPRDASKA
QEESGQWGTPPDNQWGMPVGPPGIPGLNNGMGPGNMGPPLGPPLGPHNSQMGGHMGTQGM
VQGPYHQGWGTPPQQQGYPPQGYGAPQGPQGYQGWGAGQQLQQWGAPNYGSPGGQQYGSF
GPLEGGTWGWTTPTSPSTPQPHECDPYGRNAPLNALVTGAPGAPSPNLAAAAGPQPGGKA
SADYSSWGQYNYNQMSGENSAVAAAAAAFNHGRGYNDGGAQGQAPAHQGAARYGSESLMG
QQAGDPHTNGRPSPSNAQPSPYIQL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacggtgcatggcgcgacatgatggctcaccccggcggtggcaatggaccc
agaggcaggaacattccccacgatggggaggagaaaggttcttttgaagtgatgttgctg
ggccctgactcccctgtggggcggcgcaccggtggactgagggccccaaatatcccttac
gaaggcgatgagcaagggaaaatgtttgttggtggcctgtcctgggaaacaactcaggag
tctttgcagcgttactttggtcagtatggagaagttattgactgtgtggtgatgaagaac
agtgagacaggaaggtcaaggggttttggctttgtgacatttgcagaccccaacaaggtg
gatgttgtactgaaaagtggccctcatgagctggatgggcgtacgattgatcccaaagct
tgcaatcctcgcagcatgcaaaagcagaagaaaaatggaaattggccgaaggtgtttctc
ggaggcttaccctccaatcttacagagacagatctccgcaatttcttctcacgctatggt
gctgttatggaggttgtcataatgtttgaccaggagaagaagaaatcaagaggctttgga
tttttgtccttcgaaacggaagaagctgtggatagagcggtggcagagcactttgtcaac
attaatggaaagcagaaggttgaaattaagaaagcagagccccgtgatgccagcaaggca
caggaggagagcggtcagtggggcacaccacccgacaatcagtggggcatgccagtcggc
ccacctggcatacctggcctcaacaatggcatgggacctggcaacatgggtccaccactg
ggccctcctctaggaccgcacaacagtcagatgggaggccacatgggtactcaaggcatg
gtccaagggccctaccatcaggggtggggaacaccaccgcagcagcagggttatcctccc
caaggatatggtgctccacaaggaccacagggctatcaaggctggggtgctggccaacag
ctgcagcagtggggtgctcccaattatggatctccaggcgggcagcagtatggcagcttt
ggacctttggaggggggcacttggggctggacgacccctacttctccctccacacctcag
ccacacgaatgtgatccctatggccggaatgctcctctaaatgcccttgtaactggagct
cctggtgccccatccccaaatctggctgctgctgctgggcctcagcctgggggcaaggca
tcagcagactacagttcttggggtcagtacaactacaaccagatgagtggggaaaactct
gcagtagcagccgctgccgcagcattcaatcatggacgtggatacaacgatggtggggca
cagggacaagcacctgcccaccagggggcagctcggtatggtagtgagagcctcatgggg
cagcaggctggggatccccacaccaacggacggccctcacctagtaatgctcagccatcc
ccgtacatccagctatag
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