Penaeus chinensis (fleshy prawn): 125046408
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Entry
125046408 CDS
T08118
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn00061
Fatty acid biosynthesis
pchn00071
Fatty acid degradation
pchn01100
Metabolic pathways
pchn01212
Fatty acid metabolism
pchn04146
Peroxisome
Module
pchn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125046408
00071 Fatty acid degradation
125046408
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125046408
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pchn01004
]
125046408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pchn04147
]
125046408
Enzymes [BR:
pchn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125046408
Lipid biosynthesis proteins [BR:
pchn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125046408
Exosome [BR:
pchn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125046408
Exosomal proteins of breast cancer cells
125046408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pox_A51
Motif
Other DBs
NCBI-GeneID:
125046408
NCBI-ProteinID:
XP_047500137
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All DBs
Position
39:complement(3416776..3458227)
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AA seq
709 aa
AA seq
DB search
MSEGTISIGINLIKVGVFVYDIVTYPLYAIVQQPWRAKGLMEKERASEIPVAEGLCYGSN
EAPQGFQVEIRNANIKTVEQAISYACKKHGSKKALGTRQILEEFEETQKNGKVFKKFELG
DYTWLTYNEVDDMAHNFGKGLRVIGHKPRENIVIFAETRQEWLMSAMGCFKQNIPVCTLY
ATLGDEAVIHGINETEVRHIITSHELLPKXQSLLHKCPLVTHITYFRDQLKPTELSGFKD
GIEFNSFEEVISKGKTSDYSGIEDVPPTEDDTAIIMYTSGSTGNPKGVIMSHFNLVNAII
GYAVGLNIQKDDVYLAYLPLAHVLELMAESMMLMFGVPMGYSTPLTMTDRSSKIKRGCSG
DCTVLKPTMMAAVPLILDRIYKGILDKVAAQGPWLQKLFDFALQYKLNWLRRGFETPICN
WFVFRKIRALLGGRLRLVASGGAPLSPDTHDFVRATLGVPVLQGYGLTETCGCATLMDDT
DMTTGRVGAPLSVCKIKLVNWEEGNYRITDKPRPRGEIIIGGNNIAVGYYKNPEKTREDF
LDVDGCRWFRTGDIGEFDKDGSIRIIDRKKDLVKLQIGEYVSLGKVESELKVCPLVENIC
VYAESSKNTVVAIVSPVQKNLEELAKSLGREDLRREKLCMDDDVNKSILKELLTTGKKAK
LEKFEMPGALYLTSEQWTPDTGLVTAAFKLKRKSIQTRYQDAINRMYAS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggtaccataagcatcggcatcaacctcatcaaagttggggtgttcgtctac
gacatcgtaacttacccgctgtatgccatcgtccagcagccatggcgagcgaaaggcctc
atggaaaaggagagggcttcagaaatcccggttgcagaaggcctctgctatggcagcaac
gaggctccacagggcttccaagtggagatccgtaatgctaacatcaagacagtggagcag
gccatttcatatgcctgcaagaaacatggcagcaagaaagctctggggaccaggcagatc
cttgaggagtttgaggaaacccagaaaaatggaaaggttttcaaaaagtttgaactggga
gactacacctggctgacatacaatgaagtggacgatatggcacacaacttcggcaagggc
ctgcgtgtcattgggcacaagccgagggaaaacattgtcatctttgctgagacacggcag
gagtggctcatgtccgctatgggatgctttaagcagaacattcctgtgtgtacactctat
gccaccctgggtgatgaggccgtcattcacggcatcaacgaaacagaggtgaggcacatc
atcacatcacatgagctgcttcccaaanttcaaagtttactgcacaagtgtcccctggtg
acacacatcacttacttccgtgaccagctgaagcccacagaactctcaggctttaaggat
ggcattgaattcaactcctttgaggaggtgatctccaaggggaaaacaagcgactactca
ggtattgaagatgtgccgcccacggaagatgacacagccatcatcatgtacacatctggc
tcgactgggaaccccaagggagtgatcatgtcacacttcaacctggtcaacgccatcatt
ggctacgctgtgggactcaacatccagaaggatgacgtctacctggcctacctaccccta
gcacacgtccttgaactcatggctgaatccatgatgctcatgtttggtgttccaatgggc
tactccacaccactgacaatgactgacaggtcgagcaagattaagagaggctgctctggc
gattgcaccgtcctcaaacccacaatgatggctgcagtcccgcttattctggatagaatc
tacaagggaatcctggacaaagtagctgcacaaggcccatggctccagaaactctttgac
ttcgctttacagtacaagctcaactggctgcggcgtgggttcgagactcccatttgtaac
tggtttgtcttccgcaaaattcgggcattgttgggtggaagattaagattggttgcaagt
ggtggagcaccactttcccctgacactcacgattttgtgcgtgccactctcggtgtacca
gtgttacagggctatggtctcacagaaacttgtggatgtgccactctcatggatgacaca
gatatgactacaggcagagttggtgctcctctgtcagtgtgcaaaattaagcttgttaac
tgggaagaaggcaattacagaatcacagacaagccaagaccacgaggagaaattatcata
ggtggcaataacattgctgttggctactacaagaacccagagaagaccagagaagacttc
ctggatgtggatgggtgccggtggttcagaactggagacattggagagtttgacaaggac
ggctccatcaggatcattgaccgaaagaaggacttggttaaactacagattggagaatac
gtgtccttaggcaaagtggaatcagaacttaaggtctgccctctagtagagaacatttgt
gtgtatgccgagtcttcaaagaatactgtagttgctattgttagccctgtgcagaagaac
ttggaagaattggctaagtcacttggcagagaagaccttaggagagagaagttgtgtatg
gatgatgatgtcaacaagagtattcttaaggagttgttaacgaccggaaagaaagctaag
cttgagaaatttgagatgccaggagcactctacttgacctcagaacaatggactccagac
accggtcttgtaacagcagccttcaagcttaaacggaagagcatccagaccagataccag
gatgccatcaaccggatgtatgcttcataa
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