Penaeus chinensis (fleshy prawn): 125046562
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Entry
125046562 CDS
T08118
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125046562
Membrane trafficking [BR:
pchn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125046562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
125046562
NCBI-ProteinID:
XP_047500303
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All DBs
Position
39:24229229..24246931
Genome browser
AA seq
1579 aa
AA seq
DB search
MGSLQADIGELAHHLKQERLFLEAEKQQIQILNEKVVKTIERVYQASWVRGEQQRNYDDL
VLRPHSSPPACCQRANLLNQLKFIDGYKVLGFNESLYGDLLSSLRDNPRLVAKCLVLGEN
QNQEAMQVAAGTMFSSVYGNCLLPDDETLVLNLLKHLMELQLAVSETPRRLLRRGSCAFS
QIYRSYVDTLPQAKVFLTAALHQPVMQLLMEDELFLDIDPAKAAVRFPPEERLRRFGQEG
TPEYTAALAKYRAWTIAKLVKIANRFMESIKEAMNCFPPQLSWLVRVLYDVLLTAKRADT
REVSAICVDLVFALFLCPALISPEPHGICDAPISHISRFNLIQVAQILQVLAMSRWETPD
SRLSDLYSNFDKEVISGVVDSIVEGGGSEAPPPGISCLNSPLSTLVRSSILIPEPRLHSL
VSFLFSILGELPDDDITRKELEAAIGRLKPSHITPPPTASQPGVPTASLATPKKNLLGRV
KSNRNRSSKSASEGSGDSDSLGSAQDSTTSSSQLPAQGSIDEGEVMPASLDYDTVLVISL
NVSSPPECPGLMSEEKVLSTLQVSGPPLQATKPTSRVRMNVEDDADGGGGEATIEKRTRF
SLSHDEGSIGNTSDNLEAISEAASNHSVASSLDDVEQEDQPDNLSDMVSANVSGRGTPNV
SGRDTPSSQVTEGEEVGLRGGAENQPPAANIPVTVPKPARADIEEKFGRFEIKPLIGGDE
TVSLVSDTWSTDVLASDSETIEAADRADRGDQFHDQLLNRHLAELDRMQGDYLSGDAAGE
TFETASEAWSTDVLASDSERMTEFDTDDAQSVARSDDTGRSEVEVELGGSDLLRPEPLNQ
QEDNITPRAQGSRSPVEGAFGGSSSSGILKPMPVLPPSLGLESGTSTPSGILKPIPIIQN
RAGRPATPPRVEFQPIRHAEDIDRPESEEPEGEMSQTDQEIASATQSLGRLSLNLSTLPN
NGIVSGDQHLLLNTFIGESSRTVTTAPLIDLGSSGESSHMVAPVVVHPHHKLVSSDRGSG
EDSSLHLSTTSLASSSSSGSDVVGGSGKIRSASNASSGPTTDSVDTPEPVAPPVSMAATG
AIPKSISFDKTAERGDRDSMEGDAKHKRGFFKNFKLPGFKGRRKPGTRSGDDSSFMRAGM
AGQEINMRRTLSEDNRPPTIEETSDDILAKYRKKPEVDTSETDGISGVEHNLQVNDIPKT
EEDERLFIDPNNIESSYAFTDAKRKLRLVLSIADFSMSPYLPEFGAPTGSDGTSLDSDVL
TWLRCQLAEATNLHDRSLVAQLHETIRCVQLFDTQGRERLVRSLTEDYRSRSPYVAYLVR
SRQGLLTTIAHLDKLLARIDADAEVVMASIVGVCVRMFLERREHNLSRFTHEFTVLTVPD
EKVQLVENFLSQLYNELERDPMWISSTNDQLNAARLALERVVMSHIYIHALYPNGDGDVS
RDQVLHEHMKKLSAVITPAHKDLRIPKLYQYECPWPSAQAEIICISAYKTAGDKLQCVVR
ASQTIMNLLSLAHEQSVPAADDFMPVLVYVLIKANPPALLSTAQYVNLFFEQRLKGEDQY
WWTQFCAAIEFIKTMDYTL
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcttcaggctgacataggggaactagcacaccacctgaagcaagaacgccta
ttcctcgaggctgagaaacaacagatccaaatattaaatgaaaaggttgtgaagactata
gagcgagtgtatcaggcatcctgggtgcgtggcgagcaacagagaaactacgatgatctt
gttctacgaccccattcctcccccccggcatgctgccagagagccaacctccttaatcag
ctaaagttcatcgatggatataaagtgctgggattcaatgaatccctatatggagaccta
ttgtctagtttacgcgataatccacggctagttgcaaaatgcttggttttgggagagaac
cagaaccaggaggccatgcaggtagccgcgggaaccatgttctcgtcggtgtacggcaac
tgcctcctgccagatgatgaaaccttagtgctgaatctgctgaaacatttgatggagcta
cagcttgccgtctcagagactcctcgacgtttgctgcgacgcgggtcctgtgcattcagc
caaatctatcgttcatatgtagacacgcttcctcaggccaaggtatttctaacagcagca
ttacaccaaccagtcatgcagctcctgatggaagatgaactgtttctcgatattgaccct
gccaaggctgcggttcgcttcccccctgaggagcggcttagaaggtttggtcaagaaggc
acacccgagtacacggctgctcttgctaaataccgagcctggactattgccaagcttgtc
aaaattgcaaacaggttcatggagagcattaaggaagcgatgaactgcttcccaccccag
ttgtcgtggctcgtaagagtgctgtacgacgtgctcctaacagccaagagagctgacacc
agagaggttagcgcaatttgtgtggacttggtcttcgcactgtttctctgtccagccctc
atctcgcccgagccgcacggaatctgtgatgcaccgatctcccacatttccaggtttaat
ctcattcaggttgctcagatcctgcaggtgctggcaatgagtcgctgggaaacgccagat
agcagactctcggatctgtactcaaactttgacaaagaggtcatatcaggtgttgtggac
agcattgtggaagggggagggtcagaggcccctccaccaggtatctcttgcctcaacagt
cccctgagtaccttagtccggtcatcaatattgatcccggagcctcgtctacattcactt
gtctcattcctttttagtatacttggtgaattgcctgatgatgatattacccgtaaagaa
ctggaagcagcaattggccgcttgaagccaagccacatcactcctcctccgactgcatcc
caacctggagtccccacggccagtttagccacacccaagaaaaatctgttagggagagtg
aaatccaataggaatagatcaagcaagagtgcaagtgagggcagtggtgactctgattcc
ttagggtcagcacaggactctaccaccagttctagtcagctccctgctcaaggcagcatt
gatgagggcgaggtgatgcctgcctccctagactatgacacggtccttgtgatatccctt
aatgtctccagcccaccagagtgcccaggcctcatgtctgaggagaaggtcctctctacg
ctgcaggtttctggcccccccctccaggcaaccaaacctacctcccgcgtcagaatgaat
gtggaagatgatgcagatggaggtggaggagaggccaccattgagaagcggacacggttt
tccctgtcccatgacgagggttccatcggcaatacctcagacaacttggaggccattagt
gaagctgccagcaaccatagtgtggcttccagtcttgatgatgtggagcaggaggatcaa
ccagacaacctgtcagatatggtgtctgccaatgtctctggacgaggaacgccaaacgta
tctggccgcgacactccttcctcccaggtgacagaaggggaggaagttggacttagaggc
ggagcagagaaccaaccgccagcggccaacatcccagtgacagtccccaaaccagcgaga
gcagacattgaggagaagtttgggagatttgaaattaagcctctcatagggggtgatgaa
acagtatcacttgtgtcagacacatggagcactgatgtgttggctagtgattctgagacc
attgaggcagctgacagggcagaccgtggggaccagttccacgatcagctgctaaaccgc
catttagcagaactggacaggatgcaaggagactacctcagtggagatgcagctggcgag
acctttgagacggcctctgaggcgtggagcacagatgtcctggcctcagactcagaaagg
atgactgagtttgacaccgatgatgcacagagtgtggctcgatcggatgacactggacgg
tcagaagtggaagttgagcttggtgggagtgacttgttaaggccagaacccctgaatcaa
caggaggataacatcaccccacgtgcacagggttcacgatcccctgtggagggagctttt
ggtgggagcagtagtagtggtatattaaaacctatgcctgttttgcccccatccctaggg
ttagaatctggaactagcacgcccagtggcatcctgaaacccattcccataattcagaat
agagcaggaagacctgcaacaccaccaagagtagagttccagcctattcgccatgcagaa
gacattgatcgaccagagtcagaagagccagagggtgaaatgtctcagacagatcaggaa
atcgcgtcagccacacagagtctgggacgtctgagcctaaacctttcaacattaccaaac
aatggcattgtgtctggagaccaacacctattgttgaacacctttattggggagagtagc
agaaccgtaacaactgctcccctgattgacttgggaagcagtggtgagagcagccacatg
gttgctccagtggtagttcatcctcaccacaagcttgtgtccagtgatcgaggctcaggg
gaggacagcagcctacacctaagcactacaagcttagcctcatcaagcagctcaggttcg
gatgtggttgggggctcaggtaagataaggtcggcttccaatgctagctcaggtccaacc
acagactcagtagacaccccagagcccgttgccccacctgtcagcatggcagccacggga
gcaataccaaaaagtattagtttcgacaagacagctgaacgaggggatcgtgattccatg
gagggagatgcaaagcacaagcgaggcttttttaaaaactttaagctaccggggttcaag
gggcgccgcaagccaggcactcgctcgggtgatgattcatctttcatgcgtgcaggaatg
gctggacaggaaattaacatgagaagaactctctcagaagataacagacctccaaccatt
gaggaaactagtgatgacattttagccaagtataggaagaagccagaggtggacacgtcg
gaaacagatggcatttctggtgtggagcataatttgcaagtgaatgacattccgaagaca
gaggaggatgagcgtcttttcatagatccaaacaacattgagtcaagttatgcattcaca
gatgccaagagaaagttgagattagttctgagtattgcagatttctccatgtccccatat
ctccctgaatttggtgcaccaacaggttcagatggcacaagcctagacagtgatgtacta
acatggttgcggtgccagctggccgaggcaaccaacctccatgatcgatccttggtggct
cagttgcatgaaacaattcgttgtgttcagctctttgatactcaggggcgcgaaaggctg
gtcagaagtttgacagaggactaccgcagcaggtcaccttacgtcgcatacctcgttcgc
agcagacaggggctgctgactaccattgctcatctggataaactccttgcaagaatagat
gctgatgcggaagttgtcatggcatctattgttggagtatgtgtgagaatgttccttgag
cggcgggaacataacctgagtcgtttcacacatgaatttacagtgctgactgtcccagat
gaaaaagttcagctggttgaaaatttcctgtcacaactttataacgaattggaacgagat
ccaatgtggattagtagcaccaacgaccagctaaatgcagcacgattagctttggaaaga
gtcgttatgtctcatatctacatccacgctctctatcctaatggggatggagatgtatct
cgtgatcaggttcttcatgaacatatgaagaagctgtctgcagttatcactccagctcac
aaagacttaagaatacccaagctttaccagtacgagtgtccctggccgagcgcgcaagcc
gaaataatctgtatcagtgcttacaagaccgcaggtgacaagctccagtgtgtggtgaga
gcttcccaaaccattatgaatttgctttctctagcacatgaacaatctgttcctgctgca
gatgacttcatgccagttcttgtatatgtccttataaaagcaaacccaccagcactttta
tcaacggcgcagtatgttaatttattctttgaacaacggttgaagggagaggatcagtat
tggtggacacagttctgtgctgctattgaattcatcaagacaatggactacacactctga
DBGET
integrated database retrieval system
