Penaeus chinensis (fleshy prawn): 125046641
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Entry
125046641 CDS
T08118
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04512
ECM-receptor interaction
pchn04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125046641
04518 Integrin signaling
125046641
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
JAG1-like_EGF2
FAM180
DUF883
Motif
Other DBs
NCBI-GeneID:
125046641
NCBI-ProteinID:
XP_047500434
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All DBs
Position
39:<21578789..21609809
Genome browser
AA seq
1651 aa
AA seq
DB search
MARSRLLRTLPGYVLEVAIFLCCVCSSLGQYPLYPFIEGQQGRLDVIEEPLVQPIDSQTG
RTSRCYDETGKAQKCVPEFVNAAFNRRVEVTNTCGEQRPQEYCLQTGGYGSKKACEVCNA
YIPELSHPAQYLTDFNNNNNHTWWQSETMFEGIQFPNQVNLTLDLGKTFDITYVRLFYHS
PRPESFAIFKRTNDDKEWVPYQYYSATCRDTYGIPDSNYVRREDETRALCTSEFSDISPL
TGGNVAFSTLEGRPSAYNFEKSSELQDWVSAKAIRIVLDRLNTFRDEVFGDPRVLKSYFY
AITDFAVGGRCKCNGHASECVSSTGLGGEVELVCRCEHNTAGNDCNECLPFYNDAPWARA
TSTDAHECKACNCNGYSNRCYFDQDLYDQTGHGGHCLDCAANRAGPNCERCRDNYYERED
GVCIPCNCNDIGSRSLQCASDGLCQCKPGVTGEKCNNCADNYFDFGPQGCKPCGCNVAGC
RNNEASCDPTTGVCLCKQHVEGQQCDQCKPGYFNLDLENEFGCTPCFCYGHSSICSSASG
YSQSVIESGFVRGEERWRAEDGTGRLVSMNYNPVAQNLAVSSSGREKIYFLAPDRFLGDQ
RASYNHELSFLLRVGELGPQASTEDIILEGAGLSISAPIFAQGNPLPSTQKQEYIFRLHE
DSQFGWSPRLSSRDFMSLLSNLTAIKIRGTYTYEGHGFLDDVKIQTARRGLFGEPATWIE
MCTCPEGYVGQFCESCAPGFRHKPANGGPFASCIPCDCNNHADICDSETGRCICQDNTAG
DQCERCAKGYYGNALRGTNNDCQPCPCPNGGACIQLPDDTVVCLECPKGYAGPRCELCTD
GFFGDPKGRHGPPRPCERCDCNGNIDPNAVANCNRTTGECLKCIYNTGGFYCDQCLPGFF
GDALALPKGDCRPCRCNPYGTVSERYGPPVCDQLNGQCQCKPHVTGLKCDQCEPGFWNLT
SGVGCEACNCDSVGALNGTCNAEYGQCVCRIGVTGRKCDMCEPFHYGFSLDGCKPCDCDQ
IGSVSLQCDATGQCPCRENVEGRRCDRCRENTYDKQAGCRDCPACYNLVLDSVSVHRERL
AELERLLADIVSNPTVLNDEDFEETLSTVMTQVDQLWEDARQAAKSGGDKTVAQHIEELE
ERINGVKEVLVGIRQAVGRGSDLAILGKLNITQAEDIIKRAREALTNAQIYLDVHGNDAL
SKAIDRSNQFGQQSDRMSKIAREARLLADEQEDDAISIEIVAYNARNTSNDAFELARKAM
DDQRNVTDFIKNLNNDVQGLSSLHDVTMKTANESLQQAKFTYREALEINTEASSIAIPPI
DTNVLKAQAVAIINEAERIKQDTEGLIDERSALITDIEVQLEVTSDLVERGWIEQQITTE
LLADTFTAEGKAKEARAKAEQTLSEARETLAILEGFDKQVQESRLKAEATLETVGEIEAL
IIEAEGQTKEAEEALMGAESDAKDARDIAKDAQSTAEDASEQAGGVRTKADATKNEASTL
NDMADELAGRVADTDARVSTFEAQALQDEQQVMEAQEKANQAKDKADEASFRVRETYEVV
EEILDILERAPDLDPLQLGSLELRLEEAWQMYHQSGIESTVTELSESRSWQERQISLYEE
EIRRLRIEVQNIFEIKISLPDGCYSQTKLEP
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctctcgcctcctcaggactctgccaggatatgtgctggaagtcgcgatattc
ctgtgctgtgtgtgtagctcgctcggacaataccccctttacccgttcatcgaggggcag
caggggaggctagacgtgatcgaagagcccttagtgcagccaatagactctcagacaggc
agaacttcgcggtgttatgacgagacaggcaaagcacagaaatgcgtgcccgagttcgtg
aacgcggccttcaaccggcgggtggaggtgaccaacacgtgcggcgagcagaggccgcag
gagtactgcctccagacgggcggctatgggtcgaagaaggcgtgcgaggtctgcaacgcc
tacatccccgaactctcccaccccgcccagtacctgactgacttcaacaacaacaacaac
catacgtggtggcagtcggagaccatgttcgagggcatccagttccccaaccaggtgaac
ctcacgctcgacctgggcaagacgttcgacatcacgtacgtccggctgttctatcactcc
ccgagacccgagtccttcgcgatcttcaaacgcaccaacgacgataaggagtgggttcct
tatcagtattacagcgccacctgccgcgacacctacgggatcccggactcgaactacgtg
cggcgcgaggacgagacccgcgccctctgcacgtccgagttctccgacatctcgcccttg
actggaggaaacgtcgccttctccacgctggaggggaggccgtcggcgtacaacttcgag
aagagctccgagttgcaggactgggtctcggccaaagccatccgcatcgtcctcgaccgc
ctcaacaccttcagagatgaggtcttcggtgatcctcgagtactcaagtcctacttctac
gccattactgacttcgccgtcggtggcagatgcaagtgcaacggccacgcctcggagtgc
gtgtcctcgactggcctcggaggcgaagtggagctggtgtgtcgctgcgaacacaacacg
gcgggcaacgactgtaacgagtgcttgcctttttataacgacgctccctgggcacgagcc
acgtccactgatgcccacgagtgcaaggcctgtaactgcaacggctactccaaccgctgc
tacttcgaccaggacctgtacgaccagacaggccacgggggtcactgcctggactgcgcc
gccaaccgcgcgggacccaactgcgagcgctgccgggacaactactacgagagggaggat
ggggtgtgcattccgtgcaactgcaatgatattggttcgcgcagcctgcagtgtgccagt
gacggcctgtgtcagtgcaagccgggagtcacaggggagaaatgtaacaactgtgctgac
aactatttcgattttggaccccagggttgcaagccatgtgggtgcaatgtagctggctgc
cgcaacaacgaggcaagctgtgacccaaccaccggagtgtgcctttgcaagcagcacgtg
gaagggcagcagtgcgaccagtgcaagccgggctacttcaacctggatctggagaatgag
tttggctgcacgccatgcttctgctacggacactcgtccatttgctcctcggccagcgga
tactcccagagtgtcattgagagtggttttgtgcgaggtgaggaacgctggcgtgcagag
gacggaacaggccggttagtctccatgaactacaacccagtcgctcagaacctcgctgtc
tcctcttcgggaagggaaaagatctacttcttggcaccagatcgtttcttgggagatcag
cgtgccagttacaaccatgagttgagtttcctgctgcgtgtgggtgaactcggacctcaa
gccagtacagaagacattattttggaaggagctggtcttagcatctctgctcctatcttt
gctcagggcaatccacttcctagcacacagaaacaagaatatattttccggctgcatgaa
gactcccagtttggttggtccccacgcctttcatcaagagacttcatgtccctcctgtct
aacctaacagcaattaaaatccgtggtacttacacttatgaaggacatggattcttggat
gatgtcaagattcagactgcaagaaggggtttgtttggagagcctgcaacctggattgaa
atgtgcacatgtcctgagggctatgtgggccagttctgcgagtcttgtgctcctggattc
cgacataaacctgccaacggagggccttttgcctcgtgcattccctgtgactgcaacaac
catgctgacatctgtgattctgaaactggtcgctgcatctgccaagacaacactgctgga
gaccagtgtgaacgttgtgctaagggttattatggtaatgcccttcgtggtaccaacaat
gattgtcaaccatgtccttgccccaacggaggtgcctgcatccagttacctgatgataca
gttgtgtgtctggagtgccctaagggatatgcaggtcctcgttgtgagctctgtactgat
ggcttctttggggaccccaagggacgccatgggccccctcggccatgtgaacgttgtgac
tgcaatggcaacattgatccaaatgctgtggccaattgcaatcggacaactggtgaatgt
ctcaagtgtatctacaacactggaggattttactgtgaccagtgtttaccaggtttcttt
ggagatgctctggcactaccaaagggagattgtcgtccatgtcgatgcaacccatatggc
acagtgagtgagcgttatggcccaccagtctgcgaccaattgaatggacagtgccagtgt
aagccccatgtcacaggacttaagtgtgaccaatgtgagcctggattctggaaccttacc
agtggtgtgggatgtgaagcatgcaactgtgactctgtaggagcactcaacgggacttgc
aatgcggaatatggacagtgcgtttgccgcattggagtcacaggacgcaagtgtgatatg
tgtgagcccttccattatggcttttcacttgacggatgcaaaccctgtgactgtgaccag
attggctctgtttccctgcagtgtgatgccactggccagtgcccgtgccgagaaaatgtg
gaaggccgaagatgtgaccgttgccgagagaacacctatgataaacaggctggatgtcgg
gactgccctgcttgttacaacctggttctggacagtgtgagtgtccaccgtgagcgtttg
gctgagctggagcgcctcctagcagacattgtaagcaacccaactgttctcaatgatgaa
gactttgaagaaaccctgtcgactgttatgacccaggtggaccaactgtgggaagatgca
cggcaagcagccaaatctggtggagacaagacagtggcacagcacattgaggaactggaa
gaacgcatcaatggtgtcaaagaagttttggtgggcatacgacaggcagttggccgtggc
tcagatctggcaatccttgggaagctgaacattacacaggctgaagatatcatcaaaaga
gcacgagaagcccttacaaatgcacagatctatttagatgtccatggtaatgatgctcta
agcaaggctattgaccgctccaaccagtttggacagcagtcagatcgcatgtccaagatt
gctcgggaagctcgtctcctggctgatgagcaggaggatgatgccattagtatcgaaatt
gtggcttataatgctcgtaatacttctaatgatgcctttgaacttgcacggaaggctatg
gatgaccaaagaaatgttacagatttcattaagaaccttaataacgatgtgcagggtctg
tcgtctctccatgatgtcaccatgaagactgccaatgaatctctacagcaagctaaattt
acatacagagaagccttggaaatcaacacagaggcttccagcattgccattccacctatt
gatactaatgtgctgaaagctcaagctgtggccatcatcaatgaggcagagagaatcaag
caggatacagaaggactgattgatgagagaagcgcccttattactgacattgaagtacag
cttgaggtaacctccgacctggtagagcgtggttggattgagcagcaaataaccacagag
ctcttagccgacactttcactgctgagggaaaagccaaagaagcaagagcaaaagcagag
cagaccttatctgaagcccgtgagactctcgccatcctggaaggatttgacaagcaagtt
caggagagccgcctgaaagcagaagctacactagaaaccgtgggagagattgaagcactc
attattgaggctgaaggacaaaccaaggaggctgaggaagcacttatgggggcagagtct
gatgctaaggatgctcgggacattgccaaggacgcccagagcacagcagaagatgcaagc
gagcaggcaggaggagtccgtaccaaggcagatgctactaaaaatgaagccagcactctt
aacgacatggcagatgagttggccgggagagtcgcggacacagatgctcgcgtgagcact
tttgaggctcaggctttgcaagatgagcagcaggttatggaagctcaagagaaagctaac
caggcaaaggataaggcagatgaagccagtttcagagtccgtgagacgtatgaggttgta
gaggaaattttggatatcttggaacgagctccagacttggacccattacagttggggtcc
ctagaattgcgcctggaagaggcatggcaaatgtaccaccaaagtggaattgagtccaca
gtcactgaattatctgaatctcgcagttggcaggaacgccaaatttcactctatgaagag
gaaatcaggcggctaagaattgaagttcaaaatatctttgagattaagatctctcttcca
gatggctgctacagtcagaccaaattggaaccttaa
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integrated database retrieval system