Penaeus chinensis (fleshy prawn): 125046689
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Entry
125046689 CDS
T08118
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125046689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125046689
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125046689
mRNA degradation factors
5'-3' decay
Decapping complex
125046689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
ANAPC4_WD40
BORCS6
EIF3I
DUF16
Motif
Other DBs
NCBI-GeneID:
125046689
NCBI-ProteinID:
XP_047500513
LinkDB
All DBs
Position
39:24752711..24771487
Genome browser
AA seq
1413 aa
AA seq
DB search
MEGTGYKDGTAILQALLKTSQQGQTITFPGNEERFSSAMFSSEVKVEVGPTDHTSGSSSI
TTRNITNYPWDHQYLSGSLVALHCSGEYLAYAIKAPQKSSGMVRIINRKTGDRGLVKNIR
GMVRDLAFAHLNQRVILAFTDHYGTLYVCEVSASSTEGSLDTELLLEVNSTSDEASDNHR
IIWCPYIPDEQGGEEDIDDPAYLLVLTHGNRAEIWNINVVLREYGKGQIMRDRILTGYQL
MEQHSAPITDAAFSPDGTALATAARDGFVKFFQVYMADEEKSPRCLHQWNPHDGKPLSAL
FFLDNHKNPTPEVQFWKYAVTGACNNSELRVWSCESWQCHQTLRFVPSPSLGPLKFKAAM
DPSANFLLLSDINRRVMYVIVVCQDGNANSGGSVGNSGGIGTSGNCIGVKNGGGSGGSAR
LVSVSELPVQYPALSLAVTDAAWKPYKRWKHDHVHDHAHNIHDDGDDDGDGVDVVEGVVM
RFVIINTKSLQEAILRFQPAIPLSASKATTSLDLSASQDSIGVRDGLTDLSMSLSTTVSE
VEGGVSGDGGGTEGQPPPPPPPDALTSPQSSSLTSQHPALHTPPATQPPMNLLTPDSFSS
PRKPEDMEHPDENSEDSSLSSKVTPISSKYDVPYNTNFENATLSLLLRCGSGTLMPGSEG
EGANNLNILGSVVSGSSKSPPATALPPPPSGTPPPLDFQNAEEAPLATSEVSVTAAAGRG
GASATSSPSLEVQQILHSQNGKSSDYAEDEDEEDIRAADEVEMPDDDEDEDEDEEEDEPE
ALRQAHSHPKPPPLPEPQAVPQPPSSLAQPTPTSIAPSHSSMPQPSSLPQPPSSMSHTSL
PQPPPPASQPSSSMPQLPPVSIPQPPPSMSHPPQTVPKLPLKSPHLPEASPTQMNQLTHA
HDTQKSMASAQPVDVFASVKTLPAQITCAQLEAEIKGGAISPEATESSTQQNSHQSQRNR
NHVGLVRATNRSVPDMRSSSSLEQTQLNGPVTPGVSAAEISELRSIVRSISLSRDQSNEV
LSQTLALANKLDKAIQQVNQLAKQVEEVRAAQSQVQMDLPHVVAASLRPVVEATLRSEMR
NSVVPGVVKTMDPLRSHVSQEVHNLMKTSENQVIDAVTKVIHSRSFLDNLGGTVGAVVGP
SVQNSCREAYNKLLLPGLNALTQQVFSQVNESFSRGTKEYLHNVESEMQSGRTAMQESLG
KASQSLNTACSSLTTQTKNLQENVTKLGSQQNIITESLAERIRALVREEVTRALQEHQAA
VDARSRAHTPAPAPHPHNPKLAQQQVQNLISSGQFNTAFKQALSASDLSLVVFVCERVNP
QQVFNITPCPLSQDVLLSLVNQLSHDLSTFTDLKIKYLEEAVMNLDASHPVTREHMRPVL
QGFQRNLHTHLAANPNHKKVKMLLMAVNHLVAL
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagggcacagggtacaaggatgggacagccatattgcaagcccttctgaagacaagc
cagcaaggacagaccataacttttcccggcaatgaagagcggttcagcagcgcgatgttc
agctcagaggtcaaggtggaggtgggaccaacagaccacacctcagggtcgtcgtcaatc
acaacgcgcaatatcaccaattacccttgggatcaccagtacctgtcaggaagcctagtg
gctcttcactgctcgggagagtacctggcctatgccatcaaggctccacagaaatccagt
ggaatggtgagaattatcaaccgaaaaacgggggaccgtggcctggtgaaaaacatccgt
ggaatggtgcgagaccttgcctttgcacacctcaaccagagagtcatattggcctttaca
gaccattatggcactctttatgtgtgtgaagtgtctgcgtccagtacagaaggatcactt
gacacggaactcttgctggaggtgaacagcacatcagatgaagccagtgacaatcatcgc
atcatctggtgtccgtacatccctgatgagcaaggaggcgaggaggatatagacgaccct
gcgtacctgctagttcttacacatggcaacagagcggagatatggaacatcaatgttgtt
ctgcgtgaatatggaaaagggcagataatgcgtgacagaatattaactggttaccagctc
atggagcagcactcagcacccatcacagatgctgcatttagtcctgatggcacagcttta
gcaacagctgcccgggatggatttgttaagttcttccaggtatacatggcagatgaagag
aagtcgccaagatgccttcatcagtggaatccccatgacggcaagccactctccgcgctc
ttcttcctcgataatcacaaaaatccaaccccagaggttcagttttggaagtatgccgtc
acaggtgcctgcaacaattctgagctgcgcgtttggtcatgtgaatcatggcagtgtcac
cagacactacgcttcgtcccttcaccgtccctgggccccctcaagttcaaggctgccatg
gacccctctgctaatttccttcttctctccgatatcaaccgacgcgtcatgtatgtgatt
gtggtgtgccaggatggtaatgccaacagtgggggaagtgtagggaacagtgggggcatt
ggcaccagcggcaactgcatcggtgtcaagaacggtggcggaagtggtggcagtgcccgg
ctggtgtcagtgtccgagctcccggtgcagtaccccgctctctccttggccgtgaccgat
gcagcgtggaagccctacaagcggtggaaacacgaccacgttcacgaccatgcgcacaac
attcatgatgacggtgatgatgatggagatggagtcgatgttgttgaaggtgttgtgatg
cgttttgtcatcatcaacactaaatcgctacaggaagcaatactgagattccagccagcc
attcccttgtctgcgtccaaagctacaacttccttagacttgagtgcctcacaggattct
attggggtgagggacggactgacggatctcagcatgagcctcagcaccaccgtgtcggag
gtggaaggaggagtgagtggagacggaggagggacagaaggccaacctccacctcccccg
ccccccgacgcccttacctccccccagagcagtagcctgacatcgcaacaccctgcactg
cacacccctcctgccacacagcctcctatgaacctgctcacccccgactccttcagttcc
cctcgcaaaccagaggacatggagcatcctgatgagaacagtgaggacagttctctctcg
agcaaggtaacccccatatccagcaagtacgacgtgccctacaacaccaactttgagaat
gcgacgctctctctcctattgcggtgtgggtcgggtaccctgatgcccggcagcgaaggt
gagggagccaacaacctcaatatcttggggtcagtcgtttccggatcgtccaagtcaccc
ccagccacagcgctcccccctcccccctctgggactcctcctccccttgatttccagaac
gccgaggaagcgccactggccacgtcagaagtgtctgtgactgcggctgctggtcgtgga
ggagccagcgccacatcttcaccttccttggaggtccagcaaatccttcactcacaaaat
ggtaagagttcagactacgcagaggatgaggacgaggaagacatcagagcggcagatgag
gttgaaatgcccgatgacgatgaagatgaggatgaagacgaggaggaggacgagccagaa
gccctgagacaagcacattcccatcccaagcccccacctctccctgaaccccaggcggtg
ccccagcccccttcttcactggcgcagcccacacccacttccatagcaccctctcactcc
tcgatgccccagccatcgtccctaccccagcccccatcgtccatgtcacacacctctctg
ccacagcctccccctcctgccagccagcctagctcctccatgccacagttgccccctgtg
tctataccccagccccctccatccatgtcacacccaccgcagacggtgccaaagttgccg
ctgaaatcgccacacctgccagaagcatcgccaactcagatgaatcagttgacacatgca
catgacacgcagaaatctatggcctcggcacagcctgttgacgtgtttgcctccgtaaag
acactccctgctcagataacatgcgcgcagctagaggcagagatcaagggaggagccatc
agcccagaggccacagagagcagcacccaacaaaacagtcatcagagccaaagaaacaga
aaccatgtgggcctcgtgcgagctacaaacagaagtgtgcctgatatgagaagttcgtca
agtttagaacagacacagctcaacggaccagtaacgccaggagtaagtgctgctgaaatt
tccgaactgcgtagcattgtgcgcagcataagcctcagcagagaccagagcaatgaggta
ctctctcagaccctggcacttgcaaacaaacttgacaaagcaatccagcaggtcaatcaa
ctggcaaaacaagtggaagaggtgagggctgctcagtctcaagtgcagatggaccttccc
catgtcgttgcagcctctctacggccggtggtggaagccacactcaggagcgagatgcgg
aacagtgtagtacctggagtagtaaagaccatggatcccctaagatctcacgtgtctcaa
gaagtccacaatctcatgaagacctcggagaaccaggtcattgatgccgtcactaaagtc
atccactctagatcattcttagataacctaggaggaaccgtcggtgctgttgttggccca
tcagtccagaattcctgccgtgaagcctataataagttgctcttaccaggactgaacgca
ctgacacaacaggtgttctctcaagtcaatgaaagcttcagtcgtggcaccaaagagtac
cttcacaatgtggagagtgagatgcagagtggtcgcacagccatgcaggagagtctcggc
aaagcatcccagtctctgaacacggcctgctcgtccctcaccacgcagacaaagaacctg
caggagaatgtcaccaaactcgggtcccagcagaacatcatcacagaatctctagcagag
cggattcgagcgttggtccgagaagaagtgacacgggccctccaagagcaccaagctgcc
gtcgatgcccgaagccgcgcacacacacctgcacctgccccccatccccacaaccccaag
ctagcccagcaacaggttcagaacctcatctcctcgggccagttcaacactgccttcaag
caggctctctctgcatcagaccttagcctcgtggtgtttgtgtgtgagcgtgtcaacccc
cagcaggtgttcaacatcaccccttgcccacttagtcaagatgtgcttctgtccctcgtc
aaccaactctcacatgatctttccactttcactgacctcaagatcaagtaccttgaagag
gctgttatgaatctggatgcctcccacccagtgacccgcgaacacatgcgaccagtgctg
cagggcttccagcgcaacctgcatacgcacctggctgccaatcccaaccacaagaaggtc
aagatgctgctcatggctgtcaatcaccttgttgccttgtaa
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integrated database retrieval system
