Penaeus chinensis (fleshy prawn): 125046839
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Entry
125046839 CDS
T08118
Name
(RefSeq) uncharacterized protein LOC125046839
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125046839
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pchn04054
]
125046839
Membrane trafficking [BR:
pchn04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125046839
Pattern recognition receptors [BR:
pchn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125046839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NPHP3_N
AAA_16
NB-ARC
AAA
AAA_22
AAA_14
nSTAND3
VapE-like_dom
OB_DEPS-1_2nd
NRho
Rad17
AAA_25
KAP_NTPase
TsaE
AAA_30
NTPase_1
AAA_19
ATPase_2
RsgA_GTPase
AAA_11
AAA_7
RNA_helicase
AAA_5
Motif
Other DBs
NCBI-GeneID:
125046839
NCBI-ProteinID:
XP_047500783
LinkDB
All DBs
Position
39:1194300..1200132
Genome browser
AA seq
830 aa
AA seq
DB search
MSSIKPLSNLHDKLLQVRVRVDKVFTQMQIKQENSRFHERQKEFVTFEHLLELVEEKENQ
HHKNSSALLIEGPAGVGKTTLIRKMISDWASGVSTMKNLQDYDFVIVAEGRAREIDSLAK
LVESLLSTSRKIQNEHLMTCIRDNKLLFIFDGLDELNPSSEEVLRDMLKLGETDDIIVLC
TTRSNKVPDFKRYVPDCFNIAHVKIIGIAERNRKEFVTKYCRALQTGSEMKDISGLLQYL
QRKDRHMQRHWKLAFNLVLVSVLWLFNPDAVNKLTTTTELYTATHELCYNKLKQRILDSE
TSNNLDSNTIQKRLAIFLKRLQKEALISHFLDEIVLPDASFIRLQDTCQSLGLPHLEVLS
SFLNQINFWTDTAKKKYIFPHKGLQDFFGALHIKETLLASERDLDIQRVLSGLQTLLEDI
EVPHRISELILAKNTELLEATNEDISGTSRSIISVLEETAKEVTKYSGNKKQAVTVNIAK
CQNIIIHLTGLLSTKGKTLKKTRCVELVDLLKATGIRERFHWLDHLPDIKCDAEISRLIA
KEMSLTGWIEITESCTHAYSIVLDHAQPSAVVLDIEGETEGIRCLEDLLLQMENKAWDVY
LILKNSFRDPRECDSTFDKSLQRFIQRSCARVRWFRGHLSGTSAAALSPCVERLDLIVRD
SDHYGALLPWLSELATRLPRLQILWLHVAAEVDEWLLQPLPEELPHVVLTLDGVSEATVG
WACRIARALRPRRGYLDLVFPGLLQRTDAFVHLLEALGREGVRVENAVLASPAAAHEDKQ
RLHDLVRRELGCEFSACSDDYLWTLFRLFRVLRESAPLSYSRGLTTEEFV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtattaagccattgtcaaatttacatgataaactcctgcaggtaagagtgcga
gtagacaaagtcttcacccagatgcaaatcaaacaggaaaactctcgttttcatgaaaga
cagaaggaattcgtgacttttgaacacttgctagagttggtggaggaaaaagaaaatcag
catcacaaaaacagctctgctctgctaatcgagggtcctgcaggcgttggcaaaacaacg
ctcatcagaaagatgataagcgactgggcgtcgggtgtcagtactatgaaaaatctccaa
gactatgactttgtcatcgtggctgaaggcagagcaagagaaatagactccctcgccaag
ctcgtagagtctcttctgtcgacaagtcggaaaatccagaatgaacacctgatgacatgc
atccgagataataaacttctattcatctttgatggccttgatgagctcaacccgtcatca
gaagaagtgctcagagatatgttaaagttgggtgaaaccgacgatatcattgttttgtgc
acaacacgctcgaacaaagtacctgatttcaagagatatgttcctgactgttttaatata
gcacatgtgaagatcataggaatagcagaacgcaaccgtaaagaatttgtgacaaaatac
tgtcgggccttacagaccggatctgaaatgaaagacatttcaggtcttcttcagtaccta
caaagaaaagaccgtcacatgcagaggcactggaagctggccttcaacttagtccttgtg
tcagtattgtggttattcaatcccgatgccgtaaacaaactgaccacaacgacagagctt
tacacggcaacccacgaactgtgctataacaagctaaaacagagaatactcgatagcgag
acatctaataatttagattccaatacgattcagaaaagactggcaatttttctgaagaga
ctccaaaaggaggcactgatcagtcacttcttggatgagattgttttgcctgatgcgtca
ttcatacgactccaggacacctgtcaatccttgggtttgcctcacctcgaggttctcagc
tccttcctgaaccagatcaacttctggacagatacagccaagaagaaatacatcttccct
cataaaggtcttcaagacttcttcggcgcactgcatatcaaggaaactctactggctagt
gaacgggatctggacattcagcgagtattatctggcctacagactcttcttgaagacatt
gaagttccgcaccgcatcagtgagctcattttagcaaaaaacactgaactactggaagcg
acaaacgaagatatatcagggacgtcacgttctattataagtgttctagaagaaacagct
aaagaagttacaaagtatagtggaaataaaaaacaagcagtgacggtaaatatagctaaa
tgtcagaacatcatcatacaccttactggacttcttagcacaaagggcaaaacactaaag
aagactagatgtgttgaattggtggatttattaaaggcaacaggcataagggagagattt
cactggcttgaccacctaccggacataaagtgcgacgcagaaatcagcagactcatagca
aaagaaatgagcctcacaggctggatagaaataactgagagctgtacacatgcttattcc
atcgttttggaccatgctcagccatcagctgtggtccttgatattgaaggggaaaccgaa
ggaatccgctgtctggaggaccttttgttgcaaatggaaaataaggcctgggatgtttac
ttgattctgaaaaacagctttcgggatcccagagaatgtgacagtacctttgacaaaagt
cttcagcgttttattcaaagatcgtgcgcccgcgtcaggtggttccgcgggcacctgagt
ggcacgtcggcggccgcgctgtcgccctgcgtggagaggctggatctgatcgtgcgagac
agcgaccactacggcgcgctgttgccttggctgtccgagctcgccacgcggctgcctcgg
ctgcagatcctctggctgcacgtggcggcagaggtagacgagtggctgctgcagccgctg
ccggaggagctgccacacgtggtcctgacgcttgacggcgtgtctgaggccacggtcggg
tgggcgtgtcggatcgcacgcgcgctccggccccgcagagggtacttggacctggtgttc
cccggcctcttgcaacgcacagacgccttcgtccacctcctggaagcccttggccgcgag
ggcgtgagggtggagaacgccgtgctcgcctctcccgccgccgcccacgaggacaagcag
cggctccacgacctcgttcgccgggagttaggatgcgaattttctgcatgtagcgacgac
tacctctggacgctcttcagactgttcagggtgttgcgagagtctgcgcccctgtcttat
tctcgtggtctaactacagaagaatttgtctga
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